RNA–Protein interactions for RNA: ENST00000536688.5

RFX4-204, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 2,186 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-204ENST00000536688 LEO1Q8WVC0 666 aaPredicted RBP11.78□□□□□ -0.52
RFX4-204ENST00000536688 FAXDC2Q96IV6 333 aa11.78□□□□□ -0.52
RFX4-204ENST00000536688 BPIFA3Q9BQP9 254 aa11.78□□□□□ -0.52
RFX4-204ENST00000536688 SNX14Q9Y5W7 946 aa11.78□□□□□ -0.52
RFX4-204ENST00000536688 GPTP24298 496 aa11.77□□□□□ -0.53
RFX4-204ENST00000536688 ELF1P32519 619 aa11.77□□□□□ -0.53
RFX4-204ENST00000536688 CRYMQ14894 314 aa11.77□□□□□ -0.53
RFX4-204ENST00000536688 GORABQ5T7V8 394 aa11.77□□□□□ -0.53
RFX4-204ENST00000536688 ARMCX5Q6P1M9 558 aa11.77□□□□□ -0.53
RFX4-204ENST00000536688 MSANTD4Q8NCY6 345 aa11.77□□□□□ -0.53
RFX4-204ENST00000536688 KAT2BQ92831 832 aa11.77□□□□□ -0.53
RFX4-204ENST00000536688 HYPKQ9NX55 129 aa11.77□□□□□ -0.53
RFX4-204ENST00000536688 L1RE1Q9UN81 338 aa11.77□□□□□ -0.53
RFX4-204ENST00000536688 SETD1AO15047 1707 aaKnown RBP11.77□□□□□ -0.53
RFX4-204ENST00000536688 H0YHG0 523 aa11.77□□□□□ -0.53
RFX4-204ENST00000536688 NR1I2O75469 434 aa11.77□□□□□ -0.53
RFX4-204ENST00000536688 MRPL12P52815 198 aaKnown RBP11.77□□□□□ -0.53
RFX4-204ENST00000536688 SARNPP82979 210 aaKnown RBP11.77□□□□□ -0.53
RFX4-204ENST00000536688 SF3B2Q13435 895 aaKnown RBP11.77□□□□□ -0.53
RFX4-204ENST00000536688 TPRNQ4KMQ1 711 aa11.77□□□□□ -0.53
RFX4-204ENST00000536688 TMED8Q6PL24 325 aaPredicted RBP11.77□□□□□ -0.53
RFX4-204ENST00000536688 C11orf57Q6ZUT1 292 aaPredicted RBP11.77□□□□□ -0.53
RFX4-204ENST00000536688 TEX11Q8IYF3 940 aa11.77□□□□□ -0.53
RFX4-204ENST00000536688 CNNM3Q8NE01 707 aa11.77□□□□□ -0.53
RFX4-204ENST00000536688 FAM210AQ96ND0 272 aa11.77□□□□□ -0.53
RFX4-204ENST00000536688 PLCD4Q9BRC7 762 aa11.77□□□□□ -0.53
RFX4-204ENST00000536688 SLC12A5Q9H2X9 1139 aa11.77□□□□□ -0.53
RFX4-204ENST00000536688 VIPAS39Q9H9C1 493 aa11.77□□□□□ -0.53
RFX4-204ENST00000536688 MCM8Q9UJA3 840 aa11.77□□□□□ -0.53
RFX4-204ENST00000536688 FAN1Q9Y2M0 1017 aa11.77□□□□□ -0.53
RFX4-204ENST00000536688 VPS37CA5D8V6 355 aaPredicted RBP11.76□□□□□ -0.53
RFX4-204ENST00000536688 GCFC2P16383 781 aaKnown RBP11.76□□□□□ -0.53
RFX4-204ENST00000536688 FAM212AQ96EL1 285 aa11.76□□□□□ -0.53
RFX4-204ENST00000536688 CABS1Q96KC9 395 aa11.76□□□□□ -0.53
RFX4-204ENST00000536688 VEZTQ9HBM0 779 aa11.76□□□□□ -0.53
RFX4-204ENST00000536688 SH3BP1Q9Y3L3 701 aa11.76□□□□□ -0.53
RFX4-204ENST00000536688 VWDEQ8N2E2 1590 aa11.75□□□□□ -0.53
RFX4-204ENST00000536688 TTC36A6NLP5 189 aa11.75□□□□□ -0.53
RFX4-204ENST00000536688 SHOX2O60902 331 aaPredicted RBP11.75□□□□□ -0.53
RFX4-204ENST00000536688 TWISTNBQ3B726 338 aaPredicted RBP11.75□□□□□ -0.53
RFX4-204ENST00000536688 LARP1BQ659C4 914 aaKnown RBP11.75□□□□□ -0.53
RFX4-204ENST00000536688 ITFG2Q969R8 447 aa11.75□□□□□ -0.53
RFX4-204ENST00000536688 NEO1Q92859 1461 aa11.75□□□□□ -0.53
RFX4-204ENST00000536688 ABCC1P33527 1531 aa11.75□□□□□ -0.53
RFX4-204ENST00000536688 ARAP3Q8WWN8 1544 aa11.75□□□□□ -0.53
RFX4-204ENST00000536688 LRRC7Q96NW7 1537 aa11.75□□□□□ -0.53
RFX4-204ENST00000536688 EXOC5O00471 708 aa11.75□□□□□ -0.53
RFX4-204ENST00000536688 CHUKO15111 745 aa11.75□□□□□ -0.53
RFX4-204ENST00000536688 AARSP49588 968 aaKnown RBP eCLIP11.75□□□□□ -0.53
RFX4-204ENST00000536688 PREPLQ4J6C6 727 aaPredicted RBP11.75□□□□□ -0.53
RFX4-204ENST00000536688 NBPF6Q5VWK0 638 aa11.75□□□□□ -0.53
RFX4-204ENST00000536688 NBPF5PQ86XG9 351 aaPredicted RBP11.75□□□□□ -0.53
RFX4-204ENST00000536688 CTCFLQ8NI51 663 aaPredicted RBP11.75□□□□□ -0.53
RFX4-204ENST00000536688 ERCC4Q92889 916 aaPredicted RBP11.75□□□□□ -0.53
RFX4-204ENST00000536688 NBPF4Q96M43 638 aa11.75□□□□□ -0.53
RFX4-204ENST00000536688 NBPF3Q9H094 633 aa11.75□□□□□ -0.53
RFX4-204ENST00000536688 TET3O43151 1660 aa11.74□□□□□ -0.53
RFX4-204ENST00000536688 BIRC2Q13490 618 aa11.74□□□□□ -0.53
RFX4-204ENST00000536688 GNL2Q13823 731 aaKnown RBP11.74□□□□□ -0.53
RFX4-204ENST00000536688 SPATS2Q86XZ4 545 aaKnown RBP11.74□□□□□ -0.53
RFX4-204ENST00000536688 AMOTL1Q8IY63 956 aa11.74□□□□□ -0.53
RFX4-204ENST00000536688 BICD2Q8TD16 824 aa11.74□□□□□ -0.53
RFX4-204ENST00000536688 KCNB2Q92953 911 aa11.74□□□□□ -0.53
RFX4-204ENST00000536688 EBAG9O00559 213 aa11.74□□□□□ -0.53
RFX4-204ENST00000536688 ICA1Q05084 483 aa11.74□□□□□ -0.53
RFX4-204ENST00000536688 NFE2L2Q16236 605 aa11.74□□□□□ -0.53
RFX4-204ENST00000536688 CWC27Q6UX04 472 aaKnown RBP11.74□□□□□ -0.53
RFX4-204ENST00000536688 CCDC83Q8IWF9 413 aa11.74□□□□□ -0.53
RFX4-204ENST00000536688 TSPYL6Q8N831 410 aa11.74□□□□□ -0.53
RFX4-204ENST00000536688 TERF2IPQ9NYB0 399 aa11.74□□□□□ -0.53
RFX4-204ENST00000536688 ZFYVE9O95405 1425 aa11.73□□□□□ -0.53
RFX4-204ENST00000536688 FRMPD1Q5SYB0 1578 aa11.73□□□□□ -0.53
RFX4-204ENST00000536688 FANCGO15287 622 aa11.73□□□□□ -0.53
RFX4-204ENST00000536688 DIAPH1O60610 1272 aaKnown RBP11.73□□□□□ -0.53
RFX4-204ENST00000536688 RDXP35241 583 aaKnown RBP11.73□□□□□ -0.53
RFX4-204ENST00000536688 SCRN1Q12765 414 aa11.73□□□□□ -0.53
RFX4-204ENST00000536688 WLSQ5T9L3 541 aa11.73□□□□□ -0.53
RFX4-204ENST00000536688 AFAP1Q8N556 730 aa11.73□□□□□ -0.53
RFX4-204ENST00000536688 PGBD1Q96JS3 809 aa11.73□□□□□ -0.53
RFX4-204ENST00000536688 CHMP3Q9Y3E7 222 aa11.73□□□□□ -0.53
RFX4-204ENST00000536688 ARHGAP6O43182 974 aa11.72□□□□□ -0.53
RFX4-204ENST00000536688 SCP2P22307 547 aa11.72□□□□□ -0.53
RFX4-204ENST00000536688 NF2P35240 595 aa11.72□□□□□ -0.53
RFX4-204ENST00000536688 SEMA3FQ13275 785 aa11.72□□□□□ -0.53
RFX4-204ENST00000536688 PLEKHO1Q53GL0 409 aaPredicted RBP11.72□□□□□ -0.53
RFX4-204ENST00000536688 CFAP70Q5T0N1 1121 aa11.72□□□□□ -0.53
RFX4-204ENST00000536688 TMC6Q7Z403 805 aa11.72□□□□□ -0.53
RFX4-204ENST00000536688 SRGAP1Q7Z6B7 1085 aa11.72□□□□□ -0.53
RFX4-204ENST00000536688 CEP112Q8N8E3 955 aa11.72□□□□□ -0.53
RFX4-204ENST00000536688 AFAP1L1Q8TED9 768 aa11.72□□□□□ -0.53
RFX4-204ENST00000536688 XAGE2Q96GT9 111 aa11.72□□□□□ -0.53
RFX4-204ENST00000536688 LRRCC1Q9C099 1032 aa11.72□□□□□ -0.53
RFX4-204ENST00000536688 BICC1Q9H694 974 aaKnown RBP11.72□□□□□ -0.53
RFX4-204ENST00000536688 CFAP45Q9UL16 551 aa11.72□□□□□ -0.53
RFX4-204ENST00000536688 FAM169AQ9Y6X4 670 aa11.72□□□□□ -0.53
RFX4-204ENST00000536688 A6NNZ2 444 aa11.72□□□□□ -0.53
RFX4-204ENST00000536688 MYO1BO43795 1136 aa11.72□□□□□ -0.53
RFX4-204ENST00000536688 MCM6Q14566 821 aa11.72□□□□□ -0.53
RFX4-204ENST00000536688 TUBB8Q3ZCM7 444 aa11.72□□□□□ -0.53
RFX4-204ENST00000536688 TRIM6Q9C030 488 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms