RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 RTL9Q8NET4 1388 aa18.11■□□□□ 0.49
UBE3B-206ENST00000536398 GRM8O00222 908 aa18.1■□□□□ 0.49
UBE3B-206ENST00000536398 BSDC1Q9NW68 430 aaPredicted RBP18.1■□□□□ 0.49
UBE3B-206ENST00000536398 GGA1Q9UJY5 639 aa18.1■□□□□ 0.49
UBE3B-206ENST00000536398 MINPP1Q9UNW1 487 aa18.1■□□□□ 0.49
UBE3B-206ENST00000536398 LTBP1Q14766 1721 aa18.09■□□□□ 0.49
UBE3B-206ENST00000536398 ALDH1L1O75891 902 aa18.09■□□□□ 0.49
UBE3B-206ENST00000536398 APLP1P51693 650 aa18.09■□□□□ 0.49
UBE3B-206ENST00000536398 ALDH1L2Q3SY69 923 aa18.09■□□□□ 0.49
UBE3B-206ENST00000536398 CIAPIN1Q6FI81 312 aa18.09■□□□□ 0.49
UBE3B-206ENST00000536398 CHADLQ6NUI6 762 aa18.09■□□□□ 0.49
UBE3B-206ENST00000536398 SMC4Q9NTJ3 1288 aa18.09■□□□□ 0.49
UBE3B-206ENST00000536398 C9orf78Q9NZ63 289 aaPredicted RBP18.09■□□□□ 0.49
UBE3B-206ENST00000536398 PTPRCP08575 1304 aa18.08■□□□□ 0.49
UBE3B-206ENST00000536398 NBPF7P0C2Y1 421 aaPredicted RBP18.08■□□□□ 0.48
UBE3B-206ENST00000536398 GMPSP49915 693 aaPredicted RBP18.08■□□□□ 0.48
UBE3B-206ENST00000536398 LMBR1LQ6UX01 489 aa18.08■□□□□ 0.48
UBE3B-206ENST00000536398 EYA3Q99504 573 aa18.08■□□□□ 0.48
UBE3B-206ENST00000536398 XDHP47989 1333 aa18.07■□□□□ 0.48
UBE3B-206ENST00000536398 SHTN1A0MZ66 631 aa18.07■□□□□ 0.48
UBE3B-206ENST00000536398 ECE2O60344 883 aa18.07■□□□□ 0.48
UBE3B-206ENST00000536398 IGHMBP2P38935 993 aaKnown RBP18.07■□□□□ 0.48
UBE3B-206ENST00000536398 HNRNPUQ00839 825 aaKnown RBP eCLIP18.07■□□□□ 0.48
UBE3B-206ENST00000536398 LDHDQ86WU2 507 aa18.07■□□□□ 0.48
UBE3B-206ENST00000536398 KAZALD1Q96I82 304 aa18.07■□□□□ 0.48
UBE3B-206ENST00000536398 SUCLG2Q96I99 432 aa18.07■□□□□ 0.48
UBE3B-206ENST00000536398 ZC3H12CQ9C0D7 883 aaKnown RBP18.07■□□□□ 0.48
UBE3B-206ENST00000536398 CLEC11AQ9Y240 323 aa18.07■□□□□ 0.48
UBE3B-206ENST00000536398 CHMP3Q9Y3E7 222 aa18.07■□□□□ 0.48
UBE3B-206ENST00000536398 SCN4AP35499 1836 aa18.07■□□□□ 0.48
UBE3B-206ENST00000536398 MYH3P11055 1940 aa18.06■□□□□ 0.48
UBE3B-206ENST00000536398 ANKRD18BA2A2Z9 1011 aa18.06■□□□□ 0.48
UBE3B-206ENST00000536398 PSMD14O00487 310 aa18.06■□□□□ 0.48
UBE3B-206ENST00000536398 ATP2B4P23634 1241 aa18.06■□□□□ 0.48
UBE3B-206ENST00000536398 LMOD1P29536 600 aaPredicted RBP18.06■□□□□ 0.48
UBE3B-206ENST00000536398 DNAJC5GQ8N7S2 189 aa18.06■□□□□ 0.48
UBE3B-206ENST00000536398 GPRC5DQ9NZD1 345 aa18.06■□□□□ 0.48
UBE3B-206ENST00000536398 NOB1Q9ULX3 412 aaKnown RBP18.06■□□□□ 0.48
UBE3B-206ENST00000536398 ZBTB12Q9Y330 459 aaPredicted RBP18.06■□□□□ 0.48
UBE3B-206ENST00000536398 TNIP1Q15025 636 aa18.05■□□□□ 0.48
UBE3B-206ENST00000536398 ZNF594Q96JF6 807 aaPredicted RBP18.05■□□□□ 0.48
UBE3B-206ENST00000536398 MPHOSPH8Q99549 860 aa18.05■□□□□ 0.48
UBE3B-206ENST00000536398 CT47B1P0C2W7 299 aaPredicted RBP18.04■□□□□ 0.48
UBE3B-206ENST00000536398 CCT4P50991 539 aaKnown RBP18.04■□□□□ 0.48
UBE3B-206ENST00000536398 RARSP54136 660 aaKnown RBP18.04■□□□□ 0.48
UBE3B-206ENST00000536398 IFIT5Q13325 482 aaKnown RBP18.04■□□□□ 0.48
UBE3B-206ENST00000536398 MAP1SQ66K74 1059 aaPredicted RBP18.04■□□□□ 0.48
UBE3B-206ENST00000536398 PNMA8AQ86V59 439 aaPredicted RBP18.04■□□□□ 0.48
UBE3B-206ENST00000536398 UTYO14607 1347 aa18.03■□□□□ 0.48
UBE3B-206ENST00000536398 SPEF2Q9C093 1822 aa18.03■□□□□ 0.48
UBE3B-206ENST00000536398 SNAP23O00161 211 aa18.03■□□□□ 0.48
UBE3B-206ENST00000536398 ITGBL1O95965 494 aaPredicted RBP18.03■□□□□ 0.48
UBE3B-206ENST00000536398 TXNRD3Q86VQ6 643 aa18.03■□□□□ 0.48
UBE3B-206ENST00000536398 G3V3G9 751 aa18.02■□□□□ 0.48
UBE3B-206ENST00000536398 KLRK1P26718 216 aa18.02■□□□□ 0.48
UBE3B-206ENST00000536398 CHRNDQ07001 517 aa18.02■□□□□ 0.48
UBE3B-206ENST00000536398 DCAF8Q5TAQ9 597 aa18.02■□□□□ 0.48
UBE3B-206ENST00000536398 HELBQ8NG08 1087 aaPredicted RBP18.02■□□□□ 0.48
UBE3B-206ENST00000536398 USP44Q9H0E7 712 aa18.02■□□□□ 0.48
UBE3B-206ENST00000536398 CNOT7Q9UIV1 285 aaKnown RBP18.02■□□□□ 0.48
UBE3B-206ENST00000536398 ADAMTSL1Q8N6G6 1762 aa18.02■□□□□ 0.47
UBE3B-206ENST00000536398 PASKQ96RG2 1323 aa18.01■□□□□ 0.47
UBE3B-206ENST00000536398 TAF5LO75529 589 aa18.01■□□□□ 0.47
UBE3B-206ENST00000536398 HIRAP54198 1017 aaPredicted RBP18.01■□□□□ 0.47
UBE3B-206ENST00000536398 BRPF1P55201 1214 aaPredicted RBP18.01■□□□□ 0.47
UBE3B-206ENST00000536398 CNTROBQ8N137 903 aa18.01■□□□□ 0.47
UBE3B-206ENST00000536398 BICC1Q9H694 974 aaKnown RBP18.01■□□□□ 0.47
UBE3B-206ENST00000536398 ADARB2Q9NS39 739 aaKnown RBP18.01■□□□□ 0.47
UBE3B-206ENST00000536398 BCAR3O75815 825 aa18■□□□□ 0.47
UBE3B-206ENST00000536398 FMR1Q06787 632 aaKnown RBP eCLIP18■□□□□ 0.47
UBE3B-206ENST00000536398 CCDC57Q2TAC2 916 aa18■□□□□ 0.47
UBE3B-206ENST00000536398 USP50Q70EL3 339 aaPredicted RBP18■□□□□ 0.47
UBE3B-206ENST00000536398 MICALL2Q8IY33 904 aa18■□□□□ 0.47
UBE3B-206ENST00000536398 ANKRD44Q8N8A2 993 aa18■□□□□ 0.47
UBE3B-206ENST00000536398 TRPM4Q8TD43 1214 aa18■□□□□ 0.47
UBE3B-206ENST00000536398 ANKRD2Q9GZV1 360 aa18■□□□□ 0.47
UBE3B-206ENST00000536398 LEMD3Q9Y2U8 911 aa18■□□□□ 0.47
UBE3B-206ENST00000536398 ZNF804BA4D1E1 1349 aa17.99■□□□□ 0.47
UBE3B-206ENST00000536398 SCN9AQ15858 1988 aa17.99■□□□□ 0.47
UBE3B-206ENST00000536398 EGFRP00533 1210 aa17.99■□□□□ 0.47
UBE3B-206ENST00000536398 VIL1P09327 827 aaKnown RBP17.99■□□□□ 0.47
UBE3B-206ENST00000536398 SAMD7Q7Z3H4 446 aa17.99■□□□□ 0.47
UBE3B-206ENST00000536398 MED23Q9ULK4 1368 aa17.99■□□□□ 0.47
UBE3B-206ENST00000536398 RABL6Q3YEC7 729 aaPredicted RBP17.98■□□□□ 0.47
UBE3B-206ENST00000536398 TAF7LQ5H9L4 462 aa17.98■□□□□ 0.47
UBE3B-206ENST00000536398 LDHAL6AQ6ZMR3 332 aa17.98■□□□□ 0.47
UBE3B-206ENST00000536398 DPF2Q92785 391 aa17.98■□□□□ 0.47
UBE3B-206ENST00000536398 PUS3Q9BZE2 481 aaKnown RBP17.98■□□□□ 0.47
UBE3B-206ENST00000536398 TNNQ9UQP3 1299 aa17.98■□□□□ 0.47
UBE3B-206ENST00000536398 H7C1D1 291 aa17.97■□□□□ 0.47
UBE3B-206ENST00000536398 PLIN1O60240 522 aa17.97■□□□□ 0.47
UBE3B-206ENST00000536398 KLRG1Q96E93 195 aa17.97■□□□□ 0.47
UBE3B-206ENST00000536398 MXD3Q9BW11 206 aa17.97■□□□□ 0.47
UBE3B-206ENST00000536398 API5Q9BZZ5 524 aaKnown RBP17.97■□□□□ 0.47
UBE3B-206ENST00000536398 CNNM1Q9NRU3 951 aa17.97■□□□□ 0.47
UBE3B-206ENST00000536398 TRAF5O00463 557 aa17.96■□□□□ 0.47
UBE3B-206ENST00000536398 KCNJ4P48050 445 aa17.96■□□□□ 0.47
UBE3B-206ENST00000536398 TBC1D10BQ4KMP7 808 aaPredicted RBP17.96■□□□□ 0.47
UBE3B-206ENST00000536398 RBM26Q5T8P6 1007 aaKnown RBP17.96■□□□□ 0.47
UBE3B-206ENST00000536398 RSBN1LQ6PCB5 846 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms