RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 GBA2Q9HCG7 927 aaPredicted RBP16.79■□□□□ 0.28
TNFRSF1A-207ENST00000535958 UFL1O94874 794 aa16.78■□□□□ 0.28
TNFRSF1A-207ENST00000535958 RPS8P62241 208 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1A-207ENST00000535958 MLLT1Q03111 559 aaPredicted RBP16.78■□□□□ 0.28
TNFRSF1A-207ENST00000535958 KIF4BQ2VIQ3 1234 aa16.78■□□□□ 0.28
TNFRSF1A-207ENST00000535958 SULF1Q8IWU6 871 aa16.78■□□□□ 0.28
TNFRSF1A-207ENST00000535958 POLLQ9UGP5 575 aa16.78■□□□□ 0.28
TNFRSF1A-207ENST00000535958 CCDC152Q4G0S7 254 aa16.77■□□□□ 0.28
TNFRSF1A-207ENST00000535958 RGMBQ6NW40 437 aa16.77■□□□□ 0.28
TNFRSF1A-207ENST00000535958 ZBTB38Q8NAP3 1195 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF1A-207ENST00000535958 TBC1D16Q8TBP0 767 aa16.77■□□□□ 0.28
TNFRSF1A-207ENST00000535958 MYD88Q99836 296 aa16.77■□□□□ 0.28
TNFRSF1A-207ENST00000535958 CHMP4AQ9BY43 222 aa16.77■□□□□ 0.28
TNFRSF1A-207ENST00000535958 MCOLN1Q9GZU1 580 aa16.77■□□□□ 0.28
TNFRSF1A-207ENST00000535958 MBIPQ9NS73 344 aa16.77■□□□□ 0.28
TNFRSF1A-207ENST00000535958 GGA1Q9UJY5 639 aa16.77■□□□□ 0.28
TNFRSF1A-207ENST00000535958 ADM5C9JUS6 153 aa16.76■□□□□ 0.27
TNFRSF1A-207ENST00000535958 DDX58O95786 925 aaKnown RBP16.76■□□□□ 0.27
TNFRSF1A-207ENST00000535958 TRIM28Q13263 835 aaKnown RBP16.76■□□□□ 0.27
TNFRSF1A-207ENST00000535958 DGKZQ13574 1117 aa16.76■□□□□ 0.27
TNFRSF1A-207ENST00000535958 CCDC102AQ96A19 550 aa16.76■□□□□ 0.27
TNFRSF1A-207ENST00000535958 GGA3Q9NZ52 723 aa16.76■□□□□ 0.27
TNFRSF1A-207ENST00000535958 ADAMTS8Q9UP79 889 aa16.76■□□□□ 0.27
TNFRSF1A-207ENST00000535958 ZNF157P51786 506 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1A-207ENST00000535958 GNAI1P63096 354 aa16.75■□□□□ 0.27
TNFRSF1A-207ENST00000535958 IFT57Q9NWB7 429 aa16.75■□□□□ 0.27
TNFRSF1A-207ENST00000535958 RTL9Q8NET4 1388 aa16.75■□□□□ 0.27
TNFRSF1A-207ENST00000535958 CCDC191Q8NCU4 936 aa16.74■□□□□ 0.27
TNFRSF1A-207ENST00000535958 CWC25Q9NXE8 425 aaPredicted RBP16.74■□□□□ 0.27
TNFRSF1A-207ENST00000535958 PODXL2Q9NZ53 605 aa16.74■□□□□ 0.27
TNFRSF1A-207ENST00000535958 CASP8AP2Q9UKL3 1982 aa16.74■□□□□ 0.27
TNFRSF1A-207ENST00000535958 ELL2O00472 640 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1A-207ENST00000535958 PDE8AO60658 829 aa16.73■□□□□ 0.27
TNFRSF1A-207ENST00000535958 EGFRP00533 1210 aa16.73■□□□□ 0.27
TNFRSF1A-207ENST00000535958 ANKRD18AQ8IVF6 992 aa16.73■□□□□ 0.27
TNFRSF1A-207ENST00000535958 CCDC85AQ96PX6 553 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1A-207ENST00000535958 PHAXQ9H814 394 aaKnown RBP16.73■□□□□ 0.27
TNFRSF1A-207ENST00000535958 SEC31BQ9NQW1 1179 aa16.73■□□□□ 0.27
TNFRSF1A-207ENST00000535958 KCNQ5Q9NR82 932 aa16.73■□□□□ 0.27
TNFRSF1A-207ENST00000535958 XDHP47989 1333 aa16.72■□□□□ 0.27
TNFRSF1A-207ENST00000535958 PCCAP05165 728 aaPredicted RBP16.72■□□□□ 0.27
TNFRSF1A-207ENST00000535958 VIL1P09327 827 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1A-207ENST00000535958 DLK2Q6UY11 383 aa16.72■□□□□ 0.27
TNFRSF1A-207ENST00000535958 SAGE1Q9NXZ1 904 aa16.72■□□□□ 0.27
TNFRSF1A-207ENST00000535958 COL4A1P02462 1669 aa16.72■□□□□ 0.27
TNFRSF1A-207ENST00000535958 CCDC30Q5VVM6 783 aa16.71■□□□□ 0.27
TNFRSF1A-207ENST00000535958 RSBN1LQ6PCB5 846 aaPredicted RBP16.71■□□□□ 0.27
TNFRSF1A-207ENST00000535958 AGBL3Q8NEM8 1001 aa16.71■□□□□ 0.27
TNFRSF1A-207ENST00000535958 CDC5LQ99459 802 aaKnown RBP16.71■□□□□ 0.27
TNFRSF1A-207ENST00000535958 POLR2AP24928 1970 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1A-207ENST00000535958 APAF1O14727 1248 aa16.7■□□□□ 0.26
TNFRSF1A-207ENST00000535958 ATP2B4P23634 1241 aa16.7■□□□□ 0.26
TNFRSF1A-207ENST00000535958 KIF23Q02241 960 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1A-207ENST00000535958 NEXNQ0ZGT2 675 aa16.7■□□□□ 0.26
TNFRSF1A-207ENST00000535958 ANGEL2Q5VTE6 544 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1A-207ENST00000535958 CDCA5Q96FF9 252 aa16.7■□□□□ 0.26
TNFRSF1A-207ENST00000535958 ZIC5Q96T25 663 aa16.7■□□□□ 0.26
TNFRSF1A-207ENST00000535958 SCN9AQ15858 1988 aa16.69■□□□□ 0.26
TNFRSF1A-207ENST00000535958 USP17L8P0C7I0 530 aa16.69■□□□□ 0.26
TNFRSF1A-207ENST00000535958 ZNF853P0CG23 659 aa16.69■□□□□ 0.26
TNFRSF1A-207ENST00000535958 SCARF1Q14162 830 aa16.69■□□□□ 0.26
TNFRSF1A-207ENST00000535958 FBXW7Q969H0 707 aa16.69■□□□□ 0.26
TNFRSF1A-207ENST00000535958 METTL22Q9BUU2 404 aaPredicted RBP16.69■□□□□ 0.26
TNFRSF1A-207ENST00000535958 AKAP11Q9UKA4 1901 aa16.68■□□□□ 0.26
TNFRSF1A-207ENST00000535958 USP17L3A6NCW0 530 aa16.68■□□□□ 0.26
TNFRSF1A-207ENST00000535958 USP17L4A6NCW7 530 aa16.68■□□□□ 0.26
TNFRSF1A-207ENST00000535958 FAM155AB1AL88 458 aaPredicted RBP16.68■□□□□ 0.26
TNFRSF1A-207ENST00000535958 TRPA1O75762 1119 aa16.68■□□□□ 0.26
TNFRSF1A-207ENST00000535958 SLC10A3P09131 477 aa16.68■□□□□ 0.26
TNFRSF1A-207ENST00000535958 RGS19P49795 217 aa16.68■□□□□ 0.26
TNFRSF1A-207ENST00000535958 USP17L1Q7RTZ2 530 aa16.68■□□□□ 0.26
TNFRSF1A-207ENST00000535958 PODNQ7Z5L7 613 aa16.68■□□□□ 0.26
TNFRSF1A-207ENST00000535958 JARID2Q92833 1246 aaPredicted RBP16.68■□□□□ 0.26
TNFRSF1A-207ENST00000535958 STK31Q9BXU1 1019 aa16.68■□□□□ 0.26
TNFRSF1A-207ENST00000535958 MYOZ2Q9NPC6 264 aa16.68■□□□□ 0.26
TNFRSF1A-207ENST00000535958 MAP3K2Q9Y2U5 619 aa16.68■□□□□ 0.26
TNFRSF1A-207ENST00000535958 ZNF609O15014 1411 aa16.68■□□□□ 0.26
TNFRSF1A-207ENST00000535958 CTSWP56202 376 aa16.67■□□□□ 0.26
TNFRSF1A-207ENST00000535958 ZNF280AP59817 542 aaPredicted RBP16.67■□□□□ 0.26
TNFRSF1A-207ENST00000535958 FKBP1BP68106 108 aa16.67■□□□□ 0.26
TNFRSF1A-207ENST00000535958 REM2Q8IYK8 340 aaPredicted RBP16.67■□□□□ 0.26
TNFRSF1A-207ENST00000535958 PSME4Q14997 1843 aa16.67■□□□□ 0.26
TNFRSF1A-207ENST00000535958 ASTN2O75129 1339 aaPredicted RBP16.67■□□□□ 0.26
TNFRSF1A-207ENST00000535958 PAPPA2Q9BXP8 1791 aa16.66■□□□□ 0.26
TNFRSF1A-207ENST00000535958 TTLL12Q14166 644 aaPredicted RBP16.66■□□□□ 0.26
TNFRSF1A-207ENST00000535958 OGFOD1Q8N543 542 aa16.66■□□□□ 0.26
TNFRSF1A-207ENST00000535958 PRKRIP1Q9H875 184 aaPredicted RBP16.66■□□□□ 0.26
TNFRSF1A-207ENST00000535958 RNF186Q9NXI6 227 aa16.66■□□□□ 0.26
TNFRSF1A-207ENST00000535958 PITPNM2Q9BZ72 1349 aa16.66■□□□□ 0.26
TNFRSF1A-207ENST00000535958 MED23Q9ULK4 1368 aa16.65■□□□□ 0.26
TNFRSF1A-207ENST00000535958 NF2P35240 595 aa16.65■□□□□ 0.26
TNFRSF1A-207ENST00000535958 C8orf58Q8NAV2 365 aa16.65■□□□□ 0.26
TNFRSF1A-207ENST00000535958 SPEF2Q9C093 1822 aa16.65■□□□□ 0.26
TNFRSF1A-207ENST00000535958 MYH3P11055 1940 aa16.64■□□□□ 0.26
TNFRSF1A-207ENST00000535958 IGHMBP2P38935 993 aaKnown RBP16.64■□□□□ 0.25
TNFRSF1A-207ENST00000535958 KSR2Q6VAB6 950 aa16.64■□□□□ 0.25
TNFRSF1A-207ENST00000535958 RASAL3Q86YV0 1011 aa16.64■□□□□ 0.25
TNFRSF1A-207ENST00000535958 MYO3BQ8WXR4 1341 aa16.64■□□□□ 0.25
TNFRSF1A-207ENST00000535958 PI4KAP2A4QPH2 592 aa16.63■□□□□ 0.25
TNFRSF1A-207ENST00000535958 PI4KAP1Q8N8J0 262 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms