RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 KLHL34Q8N239 644 aa20.06■□□□□ 0.8
VAMP1-205ENST00000535927 ZNF622Q969S3 477 aaKnown RBP eCLIP20.06■□□□□ 0.8
VAMP1-205ENST00000535927 CCDC85AQ96PX6 553 aaPredicted RBP20.06■□□□□ 0.8
VAMP1-205ENST00000535927 CEP126Q9P2H0 1117 aa20.06■□□□□ 0.8
VAMP1-205ENST00000535927 AKAP2Q9Y2D5 859 aa20.06■□□□□ 0.8
VAMP1-205ENST00000535927 CELF1Q92879 486 aaKnown RBP20.05■□□□□ 0.8
VAMP1-205ENST00000535927 ATP6V0A2Q9Y487 856 aa20.05■□□□□ 0.8
VAMP1-205ENST00000535927 DPEP1P16444 411 aa20.04■□□□□ 0.8
VAMP1-205ENST00000535927 ATG9AQ7Z3C6 839 aa20.04■□□□□ 0.8
VAMP1-205ENST00000535927 LRRCC1Q9C099 1032 aa20.04■□□□□ 0.8
VAMP1-205ENST00000535927 KDM2BQ8NHM5 1336 aa20.03■□□□□ 0.8
VAMP1-205ENST00000535927 KCNA3P22001 575 aa20.03■□□□□ 0.8
VAMP1-205ENST00000535927 PELP1Q8IZL8 1130 aaKnown RBP20.03■□□□□ 0.8
VAMP1-205ENST00000535927 RHPN1Q8TCX5 695 aa20.03■□□□□ 0.8
VAMP1-205ENST00000535927 ZNF594Q96JF6 807 aaPredicted RBP20.03■□□□□ 0.8
VAMP1-205ENST00000535927 PA2G4Q9UQ80 394 aaKnown RBP20.03■□□□□ 0.8
VAMP1-205ENST00000535927 PPEF1O14829 653 aaPredicted RBP20.02■□□□□ 0.8
VAMP1-205ENST00000535927 CHRNA5P30532 468 aa20.02■□□□□ 0.8
VAMP1-205ENST00000535927 DALRD3Q5D0E6 543 aaKnown RBP20.02■□□□□ 0.8
VAMP1-205ENST00000535927 CLASRPQ8N2M8 674 aaKnown RBP20.02■□□□□ 0.8
VAMP1-205ENST00000535927 PODXL2Q9NZ53 605 aa20.02■□□□□ 0.8
VAMP1-205ENST00000535927 MINPP1Q9UNW1 487 aa20.02■□□□□ 0.8
VAMP1-205ENST00000535927 EXOC6BQ9Y2D4 811 aa20.02■□□□□ 0.8
VAMP1-205ENST00000535927 LEMD3Q9Y2U8 911 aa20.02■□□□□ 0.8
VAMP1-205ENST00000535927 COL11A2P13942 1736 aaPredicted RBP20.02■□□□□ 0.79
VAMP1-205ENST00000535927 A0A0G2JLW4 131 aa20.01■□□□□ 0.79
VAMP1-205ENST00000535927 PDE8BO95263 885 aa20.01■□□□□ 0.79
VAMP1-205ENST00000535927 UBE4AQ14139 1066 aa20.01■□□□□ 0.79
VAMP1-205ENST00000535927 METTL24Q5JXM2 366 aa20.01■□□□□ 0.79
VAMP1-205ENST00000535927 PRPF40BQ6NWY9 871 aaKnown RBP20.01■□□□□ 0.79
VAMP1-205ENST00000535927 KLHDC4Q8TBB5 520 aa20.01■□□□□ 0.79
VAMP1-205ENST00000535927 SIL1Q9H173 461 aa20.01■□□□□ 0.79
VAMP1-205ENST00000535927 KIAA1551Q9HCM1 1747 aa20■□□□□ 0.79
VAMP1-205ENST00000535927 NUCB1Q02818 461 aa20■□□□□ 0.79
VAMP1-205ENST00000535927 CHRNDQ07001 517 aa20■□□□□ 0.79
VAMP1-205ENST00000535927 LRRC24Q50LG9 513 aa20■□□□□ 0.79
VAMP1-205ENST00000535927 RTKN2Q8IZC4 609 aa20■□□□□ 0.79
VAMP1-205ENST00000535927 C7orf43Q8WVR3 580 aa20■□□□□ 0.79
VAMP1-205ENST00000535927 TAF1P21675 1872 aa20■□□□□ 0.79
VAMP1-205ENST00000535927 XDHP47989 1333 aa20■□□□□ 0.79
VAMP1-205ENST00000535927 BRCA1P38398 1863 aaKnown RBP19.99■□□□□ 0.79
VAMP1-205ENST00000535927 SASH1O94885 1247 aa19.99■□□□□ 0.79
VAMP1-205ENST00000535927 ATP2B4P23634 1241 aa19.99■□□□□ 0.79
VAMP1-205ENST00000535927 ANKRD45Q5TZF3 282 aa19.99■□□□□ 0.79
VAMP1-205ENST00000535927 B4GALNT3Q6L9W6 998 aa19.99■□□□□ 0.79
VAMP1-205ENST00000535927 VGLL2Q8N8G2 317 aa19.99■□□□□ 0.79
VAMP1-205ENST00000535927 PUS3Q9BZE2 481 aaKnown RBP19.99■□□□□ 0.79
VAMP1-205ENST00000535927 VPS33BQ9H267 617 aa19.99■□□□□ 0.79
VAMP1-205ENST00000535927 ZBTB22O15209 634 aa19.98■□□□□ 0.79
VAMP1-205ENST00000535927 PUM3Q15397 648 aaKnown RBP19.98■□□□□ 0.79
VAMP1-205ENST00000535927 CHD1LQ86WJ1 897 aa19.98■□□□□ 0.79
VAMP1-205ENST00000535927 SUPT20HQ8NEM7 779 aa19.98■□□□□ 0.79
VAMP1-205ENST00000535927 LPIN2Q92539 896 aa19.98■□□□□ 0.79
VAMP1-205ENST00000535927 SLX4Q8IY92 1834 aa19.97■□□□□ 0.79
VAMP1-205ENST00000535927 LRRC37AA6NMS7 1700 aa19.97■□□□□ 0.79
VAMP1-205ENST00000535927 C15orf52Q6ZUT6 534 aaKnown RBP19.97■□□□□ 0.79
VAMP1-205ENST00000535927 ANKIB1Q9P2G1 1089 aa19.97■□□□□ 0.79
VAMP1-205ENST00000535927 IFIT1P09914 478 aaKnown RBP19.96■□□□□ 0.79
VAMP1-205ENST00000535927 TFCP2Q12800 502 aa19.96■□□□□ 0.79
VAMP1-205ENST00000535927 CCDC93Q567U6 631 aa19.96■□□□□ 0.79
VAMP1-205ENST00000535927 MPNDQ8N594 471 aa19.96■□□□□ 0.79
VAMP1-205ENST00000535927 SPEF2Q9C093 1822 aa19.95■□□□□ 0.78
VAMP1-205ENST00000535927 SLC5A1P13866 664 aa19.95■□□□□ 0.78
VAMP1-205ENST00000535927 FGFR2P21802 821 aa19.95■□□□□ 0.78
VAMP1-205ENST00000535927 TNNI3KQ59H18 835 aa19.95■□□□□ 0.78
VAMP1-205ENST00000535927 EYA3Q99504 573 aa19.95■□□□□ 0.78
VAMP1-205ENST00000535927 RTFDC1Q9BY42 306 aaPredicted RBP19.95■□□□□ 0.78
VAMP1-205ENST00000535927 GGA1Q9UJY5 639 aa19.95■□□□□ 0.78
VAMP1-205ENST00000535927 FPGT-TNNI3KV9GXZ4 949 aa19.95■□□□□ 0.78
VAMP1-205ENST00000535927 ARFGEF1Q9Y6D6 1849 aa19.95■□□□□ 0.78
VAMP1-205ENST00000535927 IFIT2P09913 472 aaKnown RBP19.94■□□□□ 0.78
VAMP1-205ENST00000535927 KCNJ4P48050 445 aa19.94■□□□□ 0.78
VAMP1-205ENST00000535927 ATP2B3Q16720 1220 aa19.94■□□□□ 0.78
VAMP1-205ENST00000535927 IFFO2Q5TF58 517 aa19.94■□□□□ 0.78
VAMP1-205ENST00000535927 PSMD1Q99460 953 aa19.94■□□□□ 0.78
VAMP1-205ENST00000535927 NSFL1CQ9UNZ2 370 aaKnown RBP19.94■□□□□ 0.78
VAMP1-205ENST00000535927 GRIN3BO60391 1043 aa19.93■□□□□ 0.78
VAMP1-205ENST00000535927 DPP8Q6V1X1 898 aaPredicted RBP19.93■□□□□ 0.78
VAMP1-205ENST00000535927 GPATCH3Q96I76 525 aa19.93■□□□□ 0.78
VAMP1-205ENST00000535927 ZNF804BA4D1E1 1349 aa19.93■□□□□ 0.78
VAMP1-205ENST00000535927 CACNA1SQ13698 1873 aa19.92■□□□□ 0.78
VAMP1-205ENST00000535927 GOLGB1Q14789 3259 aaKnown RBP19.91■□□□□ 0.78
VAMP1-205ENST00000535927 A0A1B0GUL7 405 aa19.91■□□□□ 0.78
VAMP1-205ENST00000535927 GPSM2P81274 684 aa19.91■□□□□ 0.78
VAMP1-205ENST00000535927 CAVIN4Q5BKX8 364 aa19.91■□□□□ 0.78
VAMP1-205ENST00000535927 AACSQ86V21 672 aa19.91■□□□□ 0.78
VAMP1-205ENST00000535927 NLGN2Q8NFZ4 835 aa19.91■□□□□ 0.78
VAMP1-205ENST00000535927 EAF2Q96CJ1 260 aaPredicted RBP19.91■□□□□ 0.78
VAMP1-205ENST00000535927 ZNF512BQ96KM6 892 aaPredicted RBP19.91■□□□□ 0.78
VAMP1-205ENST00000535927 TTC41PQ6P2S7 1318 aa19.91■□□□□ 0.78
VAMP1-205ENST00000535927 LTBP3Q9NS15 1303 aa19.91■□□□□ 0.78
VAMP1-205ENST00000535927 A0A1B0GUL6 1792 aa19.9■□□□□ 0.78
VAMP1-205ENST00000535927 APBB1O00213 710 aa19.9■□□□□ 0.78
VAMP1-205ENST00000535927 C21orf2O43822 256 aa19.9■□□□□ 0.78
VAMP1-205ENST00000535927 CCDC158Q5M9N0 1113 aa19.9■□□□□ 0.78
VAMP1-205ENST00000535927 TBC1D16Q8TBP0 767 aa19.9■□□□□ 0.78
VAMP1-205ENST00000535927 OSBPL3Q9H4L5 887 aa19.9■□□□□ 0.78
VAMP1-205ENST00000535927 IL1RAPL2Q9NP60 686 aa19.9■□□□□ 0.78
VAMP1-205ENST00000535927 GNL3LQ9NVN8 582 aaKnown RBP19.9■□□□□ 0.78
VAMP1-205ENST00000535927 BCS1LQ9Y276 419 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms