RNA–Protein interactions for RNA: ENST00000535883.5

LRTOMT-211, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 1,263 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-211ENST00000535883 ANKRD36CQ5JPF3 1778 aa11.76□□□□□ -0.53
LRTOMT-211ENST00000535883 KIAA0100Q14667 2235 aaKnown RBP11.76□□□□□ -0.53
LRTOMT-211ENST00000535883 WTIPA6NIX2 430 aaPredicted RBP11.75□□□□□ -0.53
LRTOMT-211ENST00000535883 ZNF280AP59817 542 aaPredicted RBP11.75□□□□□ -0.53
LRTOMT-211ENST00000535883 MKRN3Q13064 507 aaKnown RBP11.75□□□□□ -0.53
LRTOMT-211ENST00000535883 DDX46Q7L014 1031 aaKnown RBP11.75□□□□□ -0.53
LRTOMT-211ENST00000535883 GMLQ99445 158 aa11.75□□□□□ -0.53
LRTOMT-211ENST00000535883 HDAC9Q9UKV0 1011 aa11.75□□□□□ -0.53
LRTOMT-211ENST00000535883 NSFL1CQ9UNZ2 370 aaKnown RBP11.75□□□□□ -0.53
LRTOMT-211ENST00000535883 CEP290O15078 2479 aa11.74□□□□□ -0.53
LRTOMT-211ENST00000535883 RPS12P25398 132 aaKnown RBP11.74□□□□□ -0.53
LRTOMT-211ENST00000535883 SULF1Q8IWU6 871 aa11.74□□□□□ -0.53
LRTOMT-211ENST00000535883 TBC1D16Q8TBP0 767 aa11.74□□□□□ -0.53
LRTOMT-211ENST00000535883 PLEKHF1Q96S99 279 aa11.74□□□□□ -0.53
LRTOMT-211ENST00000535883 TMX4Q9H1E5 349 aaPredicted RBP11.74□□□□□ -0.53
LRTOMT-211ENST00000535883 TRIOBPQ9H2D6 2365 aa11.74□□□□□ -0.53
LRTOMT-211ENST00000535883 EIF2S2P20042 333 aaKnown RBP11.73□□□□□ -0.53
LRTOMT-211ENST00000535883 TCIRG1Q13488 830 aa11.73□□□□□ -0.53
LRTOMT-211ENST00000535883 NOM1Q5C9Z4 860 aaKnown RBP11.73□□□□□ -0.53
LRTOMT-211ENST00000535883 COPS6Q7L5N1 327 aa11.73□□□□□ -0.53
LRTOMT-211ENST00000535883 GCC1Q96CN9 775 aa11.73□□□□□ -0.53
LRTOMT-211ENST00000535883 CLSPNQ9HAW4 1339 aa11.73□□□□□ -0.53
LRTOMT-211ENST00000535883 TRMT112Q9UI30 125 aaKnown RBP11.73□□□□□ -0.53
LRTOMT-211ENST00000535883 C6orf229H3BNL8 230 aa11.72□□□□□ -0.53
LRTOMT-211ENST00000535883 EN2P19622 333 aaPredicted RBP11.72□□□□□ -0.53
LRTOMT-211ENST00000535883 PPP2R1AP30153 589 aa11.72□□□□□ -0.53
LRTOMT-211ENST00000535883 REM2Q8IYK8 340 aaPredicted RBP11.72□□□□□ -0.53
LRTOMT-211ENST00000535883 XAGE3Q8WTP9 111 aa11.72□□□□□ -0.53
LRTOMT-211ENST00000535883 NECTIN2Q92692 538 aa11.72□□□□□ -0.53
LRTOMT-211ENST00000535883 FZD1Q9UP38 647 aa11.72□□□□□ -0.53
LRTOMT-211ENST00000535883 DLG5Q8TDM6 1919 aa11.72□□□□□ -0.53
LRTOMT-211ENST00000535883 DDX60Q8IY21 1712 aaKnown RBP11.72□□□□□ -0.53
LRTOMT-211ENST00000535883 SH3TC1Q8TE82 1336 aa11.71□□□□□ -0.53
LRTOMT-211ENST00000535883 PTPN12Q05209 780 aaKnown RBP11.71□□□□□ -0.53
LRTOMT-211ENST00000535883 AIMP1Q12904 312 aaKnown RBP11.71□□□□□ -0.53
LRTOMT-211ENST00000535883 SF3B3Q15393 1217 aaKnown RBP11.71□□□□□ -0.53
LRTOMT-211ENST00000535883 NBPF9Q3BBW0 867 aa11.71□□□□□ -0.53
LRTOMT-211ENST00000535883 FAM89AQ96GI7 184 aa11.71□□□□□ -0.53
LRTOMT-211ENST00000535883 MXD3Q9BW11 206 aa11.71□□□□□ -0.53
LRTOMT-211ENST00000535883 CFHR5Q9BXR6 569 aa11.71□□□□□ -0.53
LRTOMT-211ENST00000535883 COLQQ9Y215 455 aaPredicted RBP11.71□□□□□ -0.53
LRTOMT-211ENST00000535883 PAPPA2Q9BXP8 1791 aa11.71□□□□□ -0.54
LRTOMT-211ENST00000535883 ERBB4Q15303 1308 aa11.7□□□□□ -0.54
LRTOMT-211ENST00000535883 FKTNO75072 461 aa11.7□□□□□ -0.54
LRTOMT-211ENST00000535883 FKBP1BP68106 108 aa11.7□□□□□ -0.54
LRTOMT-211ENST00000535883 KRT24Q2M2I5 525 aa11.7□□□□□ -0.54
LRTOMT-211ENST00000535883 RSBN1LQ6PCB5 846 aaPredicted RBP11.7□□□□□ -0.54
LRTOMT-211ENST00000535883 PNISRQ8TF01 805 aaKnown RBP11.7□□□□□ -0.54
LRTOMT-211ENST00000535883 SEC31BQ9NQW1 1179 aa11.7□□□□□ -0.54
LRTOMT-211ENST00000535883 RTL5Q5HYW3 569 aaPredicted RBP11.69□□□□□ -0.54
LRTOMT-211ENST00000535883 OTOP1Q7RTM1 612 aa11.69□□□□□ -0.54
LRTOMT-211ENST00000535883 TMC4Q7Z404 712 aa11.69□□□□□ -0.54
LRTOMT-211ENST00000535883 MYOZ2Q9NPC6 264 aa11.69□□□□□ -0.54
LRTOMT-211ENST00000535883 NUDCQ9Y266 331 aa11.69□□□□□ -0.54
LRTOMT-211ENST00000535883 ATP5J2-PTCD1G3V325 749 aa11.68□□□□□ -0.54
LRTOMT-211ENST00000535883 OTUD5Q96G74 571 aa11.68□□□□□ -0.54
LRTOMT-211ENST00000535883 CFAP53Q96M91 514 aa11.68□□□□□ -0.54
LRTOMT-211ENST00000535883 ISCA1Q9BUE6 129 aa11.68□□□□□ -0.54
LRTOMT-211ENST00000535883 PODXL2Q9NZ53 605 aa11.68□□□□□ -0.54
LRTOMT-211ENST00000535883 ZNF609O15014 1411 aa11.68□□□□□ -0.54
LRTOMT-211ENST00000535883 PITPNM2Q9BZ72 1349 aa11.67□□□□□ -0.54
LRTOMT-211ENST00000535883 UNC80Q8N2C7 3258 aa11.67□□□□□ -0.54
LRTOMT-211ENST00000535883 RPS8P62241 208 aaKnown RBP11.67□□□□□ -0.54
LRTOMT-211ENST00000535883 NFE2L2Q16236 605 aa11.67□□□□□ -0.54
LRTOMT-211ENST00000535883 LDLRAD1Q5T700 205 aa11.67□□□□□ -0.54
LRTOMT-211ENST00000535883 AGBL3Q8NEM8 1001 aa11.67□□□□□ -0.54
LRTOMT-211ENST00000535883 TRIM17Q9Y577 477 aa11.67□□□□□ -0.54
LRTOMT-211ENST00000535883 IGF2BP3O00425 579 aaKnown RBP eCLIP11.66□□□□□ -0.54
LRTOMT-211ENST00000535883 USP17L8P0C7I0 530 aa11.66□□□□□ -0.54
LRTOMT-211ENST00000535883 PRKG1Q13976 671 aa11.66□□□□□ -0.54
LRTOMT-211ENST00000535883 SPRYD7Q5W111 196 aa11.66□□□□□ -0.54
LRTOMT-211ENST00000535883 ZC3H12CQ9C0D7 883 aaKnown RBP11.66□□□□□ -0.54
LRTOMT-211ENST00000535883 WNT10BO00744 389 aa11.65□□□□□ -0.54
LRTOMT-211ENST00000535883 UFL1O94874 794 aa11.65□□□□□ -0.54
LRTOMT-211ENST00000535883 HSP90AB3PQ58FF7 597 aa11.65□□□□□ -0.54
LRTOMT-211ENST00000535883 ARMC5Q96C12 935 aa11.65□□□□□ -0.54
LRTOMT-211ENST00000535883 EYA3Q99504 573 aa11.65□□□□□ -0.54
LRTOMT-211ENST00000535883 TSPYL4Q9UJ04 414 aa11.65□□□□□ -0.54
LRTOMT-211ENST00000535883 PTPN22Q9Y2R2 807 aa11.65□□□□□ -0.54
LRTOMT-211ENST00000535883 CUL9Q8IWT3 2517 aa11.65□□□□□ -0.54
LRTOMT-211ENST00000535883 ZNF646O15015 1829 aaPredicted RBP11.65□□□□□ -0.55
LRTOMT-211ENST00000535883 H0YGN5 161 aa11.64□□□□□ -0.55
LRTOMT-211ENST00000535883 GJA5P36382 358 aa11.64□□□□□ -0.55
LRTOMT-211ENST00000535883 IFNL1Q8IU54 200 aa11.64□□□□□ -0.55
LRTOMT-211ENST00000535883 CD99L2Q8TCZ2 262 aa11.64□□□□□ -0.55
LRTOMT-211ENST00000535883 JARID2Q92833 1246 aaPredicted RBP11.64□□□□□ -0.55
LRTOMT-211ENST00000535883 CLMNQ96JQ2 1002 aa11.64□□□□□ -0.55
LRTOMT-211ENST00000535883 PTPN18Q99952 460 aa11.64□□□□□ -0.55
LRTOMT-211ENST00000535883 VCANP13611 3396 aa11.64□□□□□ -0.55
LRTOMT-211ENST00000535883 PSME4Q14997 1843 aa11.63□□□□□ -0.55
LRTOMT-211ENST00000535883 IRS4O14654 1257 aaPredicted RBP11.63□□□□□ -0.55
LRTOMT-211ENST00000535883 SASH1O94885 1247 aa11.63□□□□□ -0.55
LRTOMT-211ENST00000535883 TTLL12Q14166 644 aaPredicted RBP11.63□□□□□ -0.55
LRTOMT-211ENST00000535883 DACT2Q5SW24 774 aa11.63□□□□□ -0.55
LRTOMT-211ENST00000535883 INTS3Q68E01 1043 aaKnown RBP11.63□□□□□ -0.55
LRTOMT-211ENST00000535883 TXNRD3Q86VQ6 643 aa11.63□□□□□ -0.55
LRTOMT-211ENST00000535883 ZBED3Q96IU2 234 aaPredicted RBP11.63□□□□□ -0.55
LRTOMT-211ENST00000535883 CHPF2Q9P2E5 772 aa11.63□□□□□ -0.55
LRTOMT-211ENST00000535883 GGA1Q9UJY5 639 aa11.63□□□□□ -0.55
LRTOMT-211ENST00000535883 RBBP6Q7Z6E9 1792 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms