RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 PODXL2Q9NZ53 605 aa27.94■■■□□ 2.06
VPS37C-202ENST00000535818 POLLQ9UGP5 575 aa27.94■■■□□ 2.06
VPS37C-202ENST00000535818 GGA1Q9UJY5 639 aa27.94■■■□□ 2.06
VPS37C-202ENST00000535818 LTBP1Q14766 1721 aa27.94■■■□□ 2.06
VPS37C-202ENST00000535818 XDHP47989 1333 aa27.93■■■□□ 2.06
VPS37C-202ENST00000535818 ZKSCAN2Q63HK3 967 aa27.93■■■□□ 2.06
VPS37C-202ENST00000535818 C16orf71Q8IYS4 520 aaPredicted RBP27.93■■■□□ 2.06
VPS37C-202ENST00000535818 TBC1D16Q8TBP0 767 aa27.93■■■□□ 2.06
VPS37C-202ENST00000535818 RIMBP2O15034 1052 aa27.92■■■□□ 2.06
VPS37C-202ENST00000535818 TRIM27P14373 513 aa27.92■■■□□ 2.06
VPS37C-202ENST00000535818 BICC1Q9H694 974 aaKnown RBP27.92■■■□□ 2.06
VPS37C-202ENST00000535818 UBTFL1P0CB47 393 aaPredicted RBP27.91■■■□□ 2.06
VPS37C-202ENST00000535818 CLUAP1Q96AJ1 413 aa27.91■■■□□ 2.06
VPS37C-202ENST00000535818 KAZALD1Q96I82 304 aa27.91■■■□□ 2.06
VPS37C-202ENST00000535818 MINPP1Q9UNW1 487 aa27.91■■■□□ 2.06
VPS37C-202ENST00000535818 WDR90Q96KV7 1748 aa27.91■■■□□ 2.06
VPS37C-202ENST00000535818 GPR101Q96P66 508 aaPredicted RBP27.9■■■□□ 2.06
VPS37C-202ENST00000535818 VEGFAP15692 232 aaPredicted RBP27.89■■■□□ 2.06
VPS37C-202ENST00000535818 ATP2B4P23634 1241 aa27.89■■■□□ 2.06
VPS37C-202ENST00000535818 INTS3Q68E01 1043 aaKnown RBP27.89■■■□□ 2.06
VPS37C-202ENST00000535818 ZC3H12CQ9C0D7 883 aaKnown RBP27.89■■■□□ 2.06
VPS37C-202ENST00000535818 ZNRF3Q9ULT6 936 aa27.89■■■□□ 2.06
VPS37C-202ENST00000535818 TNNQ9UQP3 1299 aa27.89■■■□□ 2.06
VPS37C-202ENST00000535818 GJA3Q9Y6H8 435 aa27.89■■■□□ 2.06
VPS37C-202ENST00000535818 ANKRD2Q9GZV1 360 aa27.88■■■□□ 2.05
VPS37C-202ENST00000535818 G3V3G9 751 aa27.87■■■□□ 2.05
VPS37C-202ENST00000535818 RABL6Q3YEC7 729 aaPredicted RBP27.87■■■□□ 2.05
VPS37C-202ENST00000535818 DCAF8Q5TAQ9 597 aa27.87■■■□□ 2.05
VPS37C-202ENST00000535818 GPC2Q8N158 579 aa27.87■■■□□ 2.05
VPS37C-202ENST00000535818 ANKRD44Q8N8A2 993 aa27.87■■■□□ 2.05
VPS37C-202ENST00000535818 ZNF594Q96JF6 807 aaPredicted RBP27.87■■■□□ 2.05
VPS37C-202ENST00000535818 HDAC5Q9UQL6 1122 aa27.87■■■□□ 2.05
VPS37C-202ENST00000535818 C1QTNF8P60827 252 aa27.86■■■□□ 2.05
VPS37C-202ENST00000535818 YTHDC1Q96MU7 727 aaKnown RBP27.86■■■□□ 2.05
VPS37C-202ENST00000535818 DBNDD1Q9H9R9 158 aa27.86■■■□□ 2.05
VPS37C-202ENST00000535818 CNNM1Q9NRU3 951 aa27.86■■■□□ 2.05
VPS37C-202ENST00000535818 CHRNDQ07001 517 aa27.85■■■□□ 2.05
VPS37C-202ENST00000535818 LDHAL6AQ6ZMR3 332 aa27.85■■■□□ 2.05
VPS37C-202ENST00000535818 FTSJ3Q8IY81 847 aaKnown RBP27.85■■■□□ 2.05
VPS37C-202ENST00000535818 L3MBTL3Q96JM7 780 aaPredicted RBP27.85■■■□□ 2.05
VPS37C-202ENST00000535818 IQCA1LA6NCM1 817 aa27.84■■■□□ 2.05
VPS37C-202ENST00000535818 TOMM70O94826 608 aa27.84■■■□□ 2.05
VPS37C-202ENST00000535818 KCNJ4P48050 445 aa27.84■■■□□ 2.05
VPS37C-202ENST00000535818 DOK7Q18PE1 504 aa27.84■■■□□ 2.05
VPS37C-202ENST00000535818 MEIS3Q99687 375 aa27.84■■■□□ 2.05
VPS37C-202ENST00000535818 POTECB2RU33 542 aa27.83■■■□□ 2.05
VPS37C-202ENST00000535818 ECE2O60344 883 aa27.83■■■□□ 2.05
VPS37C-202ENST00000535818 GNAI3P08754 354 aa27.83■■■□□ 2.05
VPS37C-202ENST00000535818 CIAPIN1Q6FI81 312 aa27.83■■■□□ 2.05
VPS37C-202ENST00000535818 LEMD3Q9Y2U8 911 aa27.83■■■□□ 2.05
VPS37C-202ENST00000535818 CXCL9Q07325 125 aa27.82■■■□□ 2.04
VPS37C-202ENST00000535818 LRRFIP2Q9Y608 721 aaKnown RBP27.82■■■□□ 2.04
VPS37C-202ENST00000535818 RAD17O75943 681 aa27.81■■■□□ 2.04
VPS37C-202ENST00000535818 TNIP1Q15025 636 aa27.81■■■□□ 2.04
VPS37C-202ENST00000535818 DZIP1LQ8IYY4 767 aaKnown RBP27.81■■■□□ 2.04
VPS37C-202ENST00000535818 TMEM57Q8N5G2 664 aa27.81■■■□□ 2.04
VPS37C-202ENST00000535818 HACL1Q9UJ83 578 aa27.81■■■□□ 2.04
VPS37C-202ENST00000535818 MED23Q9ULK4 1368 aa27.81■■■□□ 2.04
VPS37C-202ENST00000535818 SCN4AP35499 1836 aa27.81■■■□□ 2.04
VPS37C-202ENST00000535818 YDJCA8MPS7 323 aa27.8■■■□□ 2.04
VPS37C-202ENST00000535818 LMOD1P29536 600 aaPredicted RBP27.8■■■□□ 2.04
VPS37C-202ENST00000535818 HELBQ8NG08 1087 aaPredicted RBP27.8■■■□□ 2.04
VPS37C-202ENST00000535818 RCAN3Q9UKA8 241 aa27.8■■■□□ 2.04
VPS37C-202ENST00000535818 ZNF804BA4D1E1 1349 aa27.8■■■□□ 2.04
VPS37C-202ENST00000535818 PLIN1O60240 522 aa27.79■■■□□ 2.04
VPS37C-202ENST00000535818 TAF5LO75529 589 aa27.79■■■□□ 2.04
VPS37C-202ENST00000535818 RBM46Q8TBY0 533 aaKnown RBP27.79■■■□□ 2.04
VPS37C-202ENST00000535818 A0A1B0GUL6 1792 aa27.78■■■□□ 2.04
VPS37C-202ENST00000535818 WTIPA6NIX2 430 aaPredicted RBP27.78■■■□□ 2.04
VPS37C-202ENST00000535818 ITPRIPQ8IWB1 547 aa27.77■■■□□ 2.04
VPS37C-202ENST00000535818 PUS3Q9BZE2 481 aaKnown RBP27.77■■■□□ 2.04
VPS37C-202ENST00000535818 KLHDC4Q8TBB5 520 aa27.76■■■□□ 2.03
VPS37C-202ENST00000535818 TAF1DQ9H5J8 278 aaPredicted RBP27.76■■■□□ 2.03
VPS37C-202ENST00000535818 EPHX2P34913 555 aa27.75■■■□□ 2.03
VPS37C-202ENST00000535818 MROH5Q6ZUA9 1318 aa27.74■■■□□ 2.03
VPS37C-202ENST00000535818 PSMD14O00487 310 aa27.74■■■□□ 2.03
VPS37C-202ENST00000535818 MS4A1P11836 297 aa27.74■■■□□ 2.03
VPS37C-202ENST00000535818 GMPSP49915 693 aaPredicted RBP27.74■■■□□ 2.03
VPS37C-202ENST00000535818 SCNN1DP51172 638 aa27.74■■■□□ 2.03
VPS37C-202ENST00000535818 EAPPQ56P03 285 aaPredicted RBP27.74■■■□□ 2.03
VPS37C-202ENST00000535818 SMC1BQ8NDV3 1235 aa27.74■■■□□ 2.03
VPS37C-202ENST00000535818 GNAI2P04899 355 aa27.73■■■□□ 2.03
VPS37C-202ENST00000535818 RLBP1P12271 317 aa27.73■■■□□ 2.03
VPS37C-202ENST00000535818 LRRC24Q50LG9 513 aa27.73■■■□□ 2.03
VPS37C-202ENST00000535818 PODNQ7Z5L7 613 aa27.73■■■□□ 2.03
VPS37C-202ENST00000535818 KCNQ5Q9NR82 932 aa27.73■■■□□ 2.03
VPS37C-202ENST00000535818 SNAP23O00161 211 aa27.72■■■□□ 2.03
VPS37C-202ENST00000535818 KLRK1P26718 216 aa27.72■■■□□ 2.03
VPS37C-202ENST00000535818 RFX5P48382 616 aaPredicted RBP27.72■■■□□ 2.03
VPS37C-202ENST00000535818 METTL24Q5JXM2 366 aa27.72■■■□□ 2.03
VPS37C-202ENST00000535818 TXNRD3Q86VQ6 643 aa27.72■■■□□ 2.03
VPS37C-202ENST00000535818 COA1Q9GZY4 146 aa27.72■■■□□ 2.03
VPS37C-202ENST00000535818 RIPOR2Q9Y4F9 1068 aa27.72■■■□□ 2.03
VPS37C-202ENST00000535818 FSTL1Q12841 308 aa27.71■■■□□ 2.03
VPS37C-202ENST00000535818 PNMA8AQ86V59 439 aaPredicted RBP27.71■■■□□ 2.03
VPS37C-202ENST00000535818 EPS15P42566 896 aa27.7■■■□□ 2.02
VPS37C-202ENST00000535818 PTPN12Q05209 780 aaKnown RBP27.7■■■□□ 2.02
VPS37C-202ENST00000535818 PANK1Q8TE04 598 aa27.7■■■□□ 2.02
VPS37C-202ENST00000535818 GPRC5DQ9NZD1 345 aa27.7■■■□□ 2.02
VPS37C-202ENST00000535818 ZBTB12Q9Y330 459 aaPredicted RBP27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms