RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 MINPP1Q9UNW1 487 aa19.32■□□□□ 0.68
CNN1-202ENST00000535659 HSP90AB4PQ58FF6 505 aa19.31■□□□□ 0.68
CNN1-202ENST00000535659 ATG9AQ7Z3C6 839 aa19.31■□□□□ 0.68
CNN1-202ENST00000535659 WWC3Q9ULE0 1092 aa19.31■□□□□ 0.68
CNN1-202ENST00000535659 TAF1P21675 1872 aa19.31■□□□□ 0.68
CNN1-202ENST00000535659 IL15P40933 162 aaPredicted RBP19.3■□□□□ 0.68
CNN1-202ENST00000535659 ZNF219Q9P2Y4 722 aaPredicted RBP19.3■□□□□ 0.68
CNN1-202ENST00000535659 BCS1LQ9Y276 419 aa19.3■□□□□ 0.68
CNN1-202ENST00000535659 EXOC6BQ9Y2D4 811 aa19.3■□□□□ 0.68
CNN1-202ENST00000535659 C21orf2O43822 256 aa19.3■□□□□ 0.68
CNN1-202ENST00000535659 CC2D2BQ6DHV5 1058 aa19.3■□□□□ 0.68
CNN1-202ENST00000535659 MROH5Q6ZUA9 1318 aa19.29■□□□□ 0.68
CNN1-202ENST00000535659 CHRNDQ07001 517 aa19.29■□□□□ 0.68
CNN1-202ENST00000535659 OS9Q13438 667 aaPredicted RBP19.29■□□□□ 0.68
CNN1-202ENST00000535659 ANKRD2Q9GZV1 360 aa19.29■□□□□ 0.68
CNN1-202ENST00000535659 PPP4R2Q9NY27 417 aa19.29■□□□□ 0.68
CNN1-202ENST00000535659 SPEF2Q9C093 1822 aa19.28■□□□□ 0.68
CNN1-202ENST00000535659 RAB11FIP3O75154 756 aa19.28■□□□□ 0.68
CNN1-202ENST00000535659 OLFM4Q6UX06 510 aa19.28■□□□□ 0.68
CNN1-202ENST00000535659 SLC51AQ86UW1 340 aa19.28■□□□□ 0.68
CNN1-202ENST00000535659 CEP126Q9P2H0 1117 aa19.28■□□□□ 0.68
CNN1-202ENST00000535659 CACNA1SQ13698 1873 aa19.28■□□□□ 0.68
CNN1-202ENST00000535659 SLX4Q8IY92 1834 aa19.28■□□□□ 0.68
CNN1-202ENST00000535659 BRCA1P38398 1863 aaKnown RBP19.27■□□□□ 0.68
CNN1-202ENST00000535659 SASH1O94885 1247 aa19.27■□□□□ 0.68
CNN1-202ENST00000535659 GRIPAP1Q4V328 841 aa19.27■□□□□ 0.68
CNN1-202ENST00000535659 METTL24Q5JXM2 366 aa19.27■□□□□ 0.68
CNN1-202ENST00000535659 SOGA3Q5TF21 947 aa19.27■□□□□ 0.68
CNN1-202ENST00000535659 ERC1Q8IUD2 1116 aa19.27■□□□□ 0.68
CNN1-202ENST00000535659 HELBQ8NG08 1087 aaPredicted RBP19.27■□□□□ 0.68
CNN1-202ENST00000535659 GCC1Q96CN9 775 aa19.27■□□□□ 0.68
CNN1-202ENST00000535659 CCDC136Q96JN2 1154 aa19.27■□□□□ 0.68
CNN1-202ENST00000535659 ANKIB1Q9P2G1 1089 aa19.27■□□□□ 0.68
CNN1-202ENST00000535659 NSFL1CQ9UNZ2 370 aaKnown RBP19.27■□□□□ 0.68
CNN1-202ENST00000535659 TAF5LO75529 589 aa19.26■□□□□ 0.67
CNN1-202ENST00000535659 GPSM2P81274 684 aa19.26■□□□□ 0.67
CNN1-202ENST00000535659 PDE8BO95263 885 aa19.25■□□□□ 0.67
CNN1-202ENST00000535659 TFCP2Q12800 502 aa19.25■□□□□ 0.67
CNN1-202ENST00000535659 RTKN2Q8IZC4 609 aa19.25■□□□□ 0.67
CNN1-202ENST00000535659 MPNDQ8N594 471 aa19.25■□□□□ 0.67
CNN1-202ENST00000535659 PODXL2Q9NZ53 605 aa19.25■□□□□ 0.67
CNN1-202ENST00000535659 APBB1O00213 710 aa19.25■□□□□ 0.67
CNN1-202ENST00000535659 CCDC93Q567U6 631 aa19.25■□□□□ 0.67
CNN1-202ENST00000535659 SMC5Q8IY18 1101 aa19.25■□□□□ 0.67
CNN1-202ENST00000535659 VGLL2Q8N8G2 317 aa19.25■□□□□ 0.67
CNN1-202ENST00000535659 RHPN1Q8TCX5 695 aa19.25■□□□□ 0.67
CNN1-202ENST00000535659 KIF1BPQ96EK5 621 aa19.25■□□□□ 0.67
CNN1-202ENST00000535659 XDHP47989 1333 aa19.24■□□□□ 0.67
CNN1-202ENST00000535659 DPP8Q6V1X1 898 aaPredicted RBP19.24■□□□□ 0.67
CNN1-202ENST00000535659 LEMD3Q9Y2U8 911 aa19.24■□□□□ 0.67
CNN1-202ENST00000535659 CHD4Q14839 1912 aa19.23■□□□□ 0.67
CNN1-202ENST00000535659 ATP2B4P23634 1241 aa19.23■□□□□ 0.67
CNN1-202ENST00000535659 PELP1Q8IZL8 1130 aaKnown RBP19.23■□□□□ 0.67
CNN1-202ENST00000535659 LRRCC1Q9C099 1032 aa19.23■□□□□ 0.67
CNN1-202ENST00000535659 AKAP2Q9Y2D5 859 aa19.23■□□□□ 0.67
CNN1-202ENST00000535659 LRRC37AA6NMS7 1700 aa19.22■□□□□ 0.67
CNN1-202ENST00000535659 B4GALNT3Q6L9W6 998 aa19.22■□□□□ 0.67
CNN1-202ENST00000535659 TBC1D16Q8TBP0 767 aa19.22■□□□□ 0.67
CNN1-202ENST00000535659 GGA1Q9UJY5 639 aa19.22■□□□□ 0.67
CNN1-202ENST00000535659 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.22■□□□□ 0.67
CNN1-202ENST00000535659 WTIPA6NIX2 430 aaPredicted RBP19.21■□□□□ 0.67
CNN1-202ENST00000535659 YBX3P16989 372 aaKnown RBP eCLIP19.21■□□□□ 0.679e-6■■■□□ 18.6
CNN1-202ENST00000535659 KCNJ4P48050 445 aa19.21■□□□□ 0.67
CNN1-202ENST00000535659 UBE4AQ14139 1066 aa19.21■□□□□ 0.67
CNN1-202ENST00000535659 GPR162Q16538 588 aa19.21■□□□□ 0.67
CNN1-202ENST00000535659 ANKRD45Q5TZF3 282 aa19.21■□□□□ 0.67
CNN1-202ENST00000535659 GPR108Q9NPR9 543 aa19.21■□□□□ 0.67
CNN1-202ENST00000535659 POLLQ9UGP5 575 aa19.21■□□□□ 0.67
CNN1-202ENST00000535659 GTF3C3Q9Y5Q9 886 aa19.21■□□□□ 0.67
CNN1-202ENST00000535659 ZNF804BA4D1E1 1349 aa19.21■□□□□ 0.67
CNN1-202ENST00000535659 C6orf229H3BNL8 230 aa19.2■□□□□ 0.66
CNN1-202ENST00000535659 SNAP23O00161 211 aa19.2■□□□□ 0.66
CNN1-202ENST00000535659 PUM3Q15397 648 aaKnown RBP19.2■□□□□ 0.66
CNN1-202ENST00000535659 ZNF784Q8NCA9 323 aaPredicted RBP19.2■□□□□ 0.66
CNN1-202ENST00000535659 RTFDC1Q9BY42 306 aaPredicted RBP19.2■□□□□ 0.66
CNN1-202ENST00000535659 UTRNP46939 3433 aa19.2■□□□□ 0.66
CNN1-202ENST00000535659 SMARCA5O60264 1052 aaPredicted RBP19.2■□□□□ 0.66
CNN1-202ENST00000535659 UFL1O94874 794 aa19.2■□□□□ 0.66
CNN1-202ENST00000535659 FGFR2P21802 821 aa19.2■□□□□ 0.66
CNN1-202ENST00000535659 TIMM10P62072 90 aa19.2■□□□□ 0.66
CNN1-202ENST00000535659 ARHGAP27Q6ZUM4 889 aa19.2■□□□□ 0.66
CNN1-202ENST00000535659 CENPQQ7L2Z9 268 aaPredicted RBP19.2■□□□□ 0.66
CNN1-202ENST00000535659 CLASRPQ8N2M8 674 aaKnown RBP19.2■□□□□ 0.66
CNN1-202ENST00000535659 SUPT20HQ8NEM7 779 aa19.2■□□□□ 0.66
CNN1-202ENST00000535659 LPIN2Q92539 896 aa19.2■□□□□ 0.66
CNN1-202ENST00000535659 PSMD1Q99460 953 aa19.2■□□□□ 0.66
CNN1-202ENST00000535659 IL1RAPL2Q9NP60 686 aa19.2■□□□□ 0.66
CNN1-202ENST00000535659 ZBTB47Q9UFB7 747 aaPredicted RBP19.2■□□□□ 0.66
CNN1-202ENST00000535659 FKBP4Q02790 459 aaKnown RBP eCLIP19.19■□□□□ 0.66
CNN1-202ENST00000535659 ATP2B3Q16720 1220 aa19.19■□□□□ 0.66
CNN1-202ENST00000535659 KDM2BQ8NHM5 1336 aa19.19■□□□□ 0.66
CNN1-202ENST00000535659 SNED1Q8TER0 1413 aa19.19■□□□□ 0.66
CNN1-202ENST00000535659 A0A1B0GUL7 405 aa19.18■□□□□ 0.66
CNN1-202ENST00000535659 IFIT1P09914 478 aaKnown RBP19.18■□□□□ 0.66
CNN1-202ENST00000535659 TNNI3KQ59H18 835 aa19.18■□□□□ 0.66
CNN1-202ENST00000535659 EAF2Q96CJ1 260 aaPredicted RBP19.18■□□□□ 0.66
CNN1-202ENST00000535659 NEUROD6Q96NK8 337 aa19.18■□□□□ 0.66
CNN1-202ENST00000535659 FPGT-TNNI3KV9GXZ4 949 aa19.18■□□□□ 0.66
CNN1-202ENST00000535659 ARFGEF1Q9Y6D6 1849 aa19.18■□□□□ 0.66
CNN1-202ENST00000535659 A0A1B0GUL6 1792 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms