RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 FZD9O00144 591 aa28.54■■■□□ 2.16
SFSWAP-204ENST00000535399 RLBP1P12271 317 aa28.54■■■□□ 2.16
SFSWAP-204ENST00000535399 DZIP1LQ8IYY4 767 aaKnown RBP28.54■■■□□ 2.16
SFSWAP-204ENST00000535399 JDP2Q8WYK2 163 aa28.54■■■□□ 2.16
SFSWAP-204ENST00000535399 TIAM2Q8IVF5 1701 aa28.54■■■□□ 2.16
SFSWAP-204ENST00000535399 XDHP47989 1333 aa28.53■■■□□ 2.16
SFSWAP-204ENST00000535399 LTBP1Q14766 1721 aa28.53■■■□□ 2.16
SFSWAP-204ENST00000535399 C6orf229H3BNL8 230 aa28.53■■■□□ 2.16
SFSWAP-204ENST00000535399 ZNF594Q96JF6 807 aaPredicted RBP28.53■■■□□ 2.16
SFSWAP-204ENST00000535399 GGA1Q9UJY5 639 aa28.53■■■□□ 2.16
SFSWAP-204ENST00000535399 KDM2BQ8NHM5 1336 aa28.52■■■□□ 2.16
SFSWAP-204ENST00000535399 UFL1O94874 794 aa28.52■■■□□ 2.16
SFSWAP-204ENST00000535399 FTSJ3Q8IY81 847 aaKnown RBP28.52■■■□□ 2.16
SFSWAP-204ENST00000535399 GPR101Q96P66 508 aaPredicted RBP28.52■■■□□ 2.16
SFSWAP-204ENST00000535399 ZNF541Q9H0D2 1346 aa28.51■■■□□ 2.15
SFSWAP-204ENST00000535399 GNAI3P08754 354 aa28.51■■■□□ 2.15
SFSWAP-204ENST00000535399 WASHC4Q2M389 1173 aa28.51■■■□□ 2.15
SFSWAP-204ENST00000535399 TAF7LQ5H9L4 462 aa28.51■■■□□ 2.15
SFSWAP-204ENST00000535399 NIM1KQ8IY84 436 aa28.51■■■□□ 2.15
SFSWAP-204ENST00000535399 LRRFIP2Q9Y608 721 aaKnown RBP28.51■■■□□ 2.15
SFSWAP-204ENST00000535399 ATP2B4P23634 1241 aa28.5■■■□□ 2.15
SFSWAP-204ENST00000535399 DPY19L2Q6NUT2 758 aa28.5■■■□□ 2.15
SFSWAP-204ENST00000535399 EYA3Q99504 573 aa28.5■■■□□ 2.15
SFSWAP-204ENST00000535399 NMRK2Q9NPI5 230 aa28.5■■■□□ 2.15
SFSWAP-204ENST00000535399 HDAC5Q9UQL6 1122 aa28.5■■■□□ 2.15
SFSWAP-204ENST00000535399 WTIPA6NIX2 430 aaPredicted RBP28.49■■■□□ 2.15
SFSWAP-204ENST00000535399 CHRNDQ07001 517 aa28.49■■■□□ 2.15
SFSWAP-204ENST00000535399 DDNO94850 711 aaPredicted RBP28.48■■■□□ 2.15
SFSWAP-204ENST00000535399 LDHAL6AQ6ZMR3 332 aa28.48■■■□□ 2.15
SFSWAP-204ENST00000535399 ANKRD2Q9GZV1 360 aa28.48■■■□□ 2.15
SFSWAP-204ENST00000535399 RIMBP2O15034 1052 aa28.47■■■□□ 2.15
SFSWAP-204ENST00000535399 PANK1Q8TE04 598 aa28.47■■■□□ 2.15
SFSWAP-204ENST00000535399 ZNRF3Q9ULT6 936 aa28.47■■■□□ 2.15
SFSWAP-204ENST00000535399 KIF3CO14782 793 aa28.46■■■□□ 2.15
SFSWAP-204ENST00000535399 PLIN1O60240 522 aa28.46■■■□□ 2.15
SFSWAP-204ENST00000535399 RFX5P48382 616 aaPredicted RBP28.46■■■□□ 2.15
SFSWAP-204ENST00000535399 PUS3Q9BZE2 481 aaKnown RBP28.46■■■□□ 2.15
SFSWAP-204ENST00000535399 EIF6P56537 245 aaKnown RBP28.45■■■□□ 2.14
SFSWAP-204ENST00000535399 ITPRIPQ8IWB1 547 aa28.45■■■□□ 2.14
SFSWAP-204ENST00000535399 ZC3H12CQ9C0D7 883 aaKnown RBP28.45■■■□□ 2.14
SFSWAP-204ENST00000535399 RRAGCQ9HB90 399 aa28.45■■■□□ 2.14
SFSWAP-204ENST00000535399 CNNM1Q9NRU3 951 aa28.45■■■□□ 2.14
SFSWAP-204ENST00000535399 LEMD3Q9Y2U8 911 aa28.45■■■□□ 2.14
SFSWAP-204ENST00000535399 SPEF2Q9C093 1822 aa28.45■■■□□ 2.14
SFSWAP-204ENST00000535399 KLHDC4Q8TBB5 520 aa28.44■■■□□ 2.14
SFSWAP-204ENST00000535399 RIPOR2Q9Y4F9 1068 aa28.44■■■□□ 2.14
SFSWAP-204ENST00000535399 YDJCA8MPS7 323 aa28.43■■■□□ 2.14
SFSWAP-204ENST00000535399 POTECB2RU33 542 aa28.43■■■□□ 2.14
SFSWAP-204ENST00000535399 GNAI2P04899 355 aa28.43■■■□□ 2.14
SFSWAP-204ENST00000535399 HELBQ8NG08 1087 aaPredicted RBP28.43■■■□□ 2.14
SFSWAP-204ENST00000535399 DBNDD1Q9H9R9 158 aa28.43■■■□□ 2.14
SFSWAP-204ENST00000535399 ZBTB7BO15156 539 aaPredicted RBP28.42■■■□□ 2.14
SFSWAP-204ENST00000535399 MS4A1P11836 297 aa28.42■■■□□ 2.14
SFSWAP-204ENST00000535399 DOK7Q18PE1 504 aa28.42■■■□□ 2.14
SFSWAP-204ENST00000535399 GPC2Q8N158 579 aa28.42■■■□□ 2.14
SFSWAP-204ENST00000535399 L3MBTL3Q96JM7 780 aaPredicted RBP28.42■■■□□ 2.14
SFSWAP-204ENST00000535399 ZNF804BA4D1E1 1349 aa28.42■■■□□ 2.14
SFSWAP-204ENST00000535399 MED23Q9ULK4 1368 aa28.41■■■□□ 2.14
SFSWAP-204ENST00000535399 TAF5LO75529 589 aa28.41■■■□□ 2.14
SFSWAP-204ENST00000535399 PTPN12Q05209 780 aaKnown RBP28.41■■■□□ 2.14
SFSWAP-204ENST00000535399 CXCL9Q07325 125 aa28.41■■■□□ 2.14
SFSWAP-204ENST00000535399 LRRC24Q50LG9 513 aa28.41■■■□□ 2.14
SFSWAP-204ENST00000535399 SNAP23O00161 211 aa28.4■■■□□ 2.14
SFSWAP-204ENST00000535399 MTX1Q13505 466 aa28.4■■■□□ 2.14
SFSWAP-204ENST00000535399 ECE2O60344 883 aa28.39■■■□□ 2.14
SFSWAP-204ENST00000535399 VEGFAP15692 232 aaPredicted RBP28.39■■■□□ 2.14
SFSWAP-204ENST00000535399 KLRK1P26718 216 aa28.39■■■□□ 2.14
SFSWAP-204ENST00000535399 WDR90Q96KV7 1748 aa28.39■■■□□ 2.14
SFSWAP-204ENST00000535399 GJA3Q9Y6H8 435 aa28.39■■■□□ 2.14
SFSWAP-204ENST00000535399 RAD17O75943 681 aa28.38■■■□□ 2.13
SFSWAP-204ENST00000535399 KCNJ4P48050 445 aa28.38■■■□□ 2.13
SFSWAP-204ENST00000535399 TXNRD3Q86VQ6 643 aa28.38■■■□□ 2.13
SFSWAP-204ENST00000535399 IRS2Q9Y4H2 1338 aa28.38■■■□□ 2.13
SFSWAP-204ENST00000535399 CIAPIN1Q6FI81 312 aa28.37■■■□□ 2.13
SFSWAP-204ENST00000535399 MROH5Q6ZUA9 1318 aa28.37■■■□□ 2.13
SFSWAP-204ENST00000535399 EYA2O00167 538 aa28.36■■■□□ 2.13
SFSWAP-204ENST00000535399 MVPQ14764 893 aaKnown RBP28.36■■■□□ 2.13
SFSWAP-204ENST00000535399 C15orf52Q6ZUT6 534 aaKnown RBP28.36■■■□□ 2.13
SFSWAP-204ENST00000535399 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.36■■■□□ 2.13
SFSWAP-204ENST00000535399 KCNQ5Q9NR82 932 aa28.36■■■□□ 2.13
SFSWAP-204ENST00000535399 G3V3G9 751 aa28.35■■■□□ 2.13
SFSWAP-204ENST00000535399 SRGAP3O43295 1099 aa28.35■■■□□ 2.13
SFSWAP-204ENST00000535399 PDE3AQ14432 1141 aa28.35■■■□□ 2.13
SFSWAP-204ENST00000535399 TNIP1Q15025 636 aa28.35■■■□□ 2.13
SFSWAP-204ENST00000535399 DCAF8Q5TAQ9 597 aa28.35■■■□□ 2.13
SFSWAP-204ENST00000535399 COG6Q9Y2V7 657 aa28.35■■■□□ 2.13
SFSWAP-204ENST00000535399 METTL24Q5JXM2 366 aa28.34■■■□□ 2.13
SFSWAP-204ENST00000535399 C20orf194Q5TEA3 1177 aa28.34■■■□□ 2.13
SFSWAP-204ENST00000535399 ATG9AQ7Z3C6 839 aa28.34■■■□□ 2.13
SFSWAP-204ENST00000535399 VGLL2Q8N8G2 317 aa28.34■■■□□ 2.13
SFSWAP-204ENST00000535399 C1orf115Q9H7X2 142 aa28.34■■■□□ 2.13
SFSWAP-204ENST00000535399 COPRSQ9NQ92 184 aa28.34■■■□□ 2.13
SFSWAP-204ENST00000535399 PA2G4Q9UQ80 394 aaKnown RBP28.34■■■□□ 2.13
SFSWAP-204ENST00000535399 CIAO1O76071 339 aa28.33■■■□□ 2.13
SFSWAP-204ENST00000535399 UBE4AQ14139 1066 aa28.33■■■□□ 2.13
SFSWAP-204ENST00000535399 COA1Q9GZY4 146 aa28.33■■■□□ 2.13
SFSWAP-204ENST00000535399 FBXO3Q9UK99 471 aa28.33■■■□□ 2.13
SFSWAP-204ENST00000535399 PNMA6EA0A0J9YXQ4 647 aa28.32■■■□□ 2.12
SFSWAP-204ENST00000535399 IQCA1LA6NCM1 817 aa28.32■■■□□ 2.12
SFSWAP-204ENST00000535399 PSMD14O00487 310 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms