RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 TBC1D16Q8TBP0 767 aa10.91□□□□□ -0.66
SFSWAP-202ENST00000535202 SPINK5Q9NQ38 1064 aaPredicted RBP10.91□□□□□ -0.66
SFSWAP-202ENST00000535202 ADARB2Q9NS39 739 aaKnown RBP10.91□□□□□ -0.66
SFSWAP-202ENST00000535202 ANKIB1Q9P2G1 1089 aa10.91□□□□□ -0.66
SFSWAP-202ENST00000535202 ECE2O60344 883 aa10.9□□□□□ -0.66
SFSWAP-202ENST00000535202 DOK7Q18PE1 504 aa10.9□□□□□ -0.66
SFSWAP-202ENST00000535202 UBE3BQ7Z3V4 1068 aa10.9□□□□□ -0.66
SFSWAP-202ENST00000535202 DNAAF4Q8WXU2 420 aa10.9□□□□□ -0.66
SFSWAP-202ENST00000535202 MYH16Q9H6N6 1097 aa10.9□□□□□ -0.66
SFSWAP-202ENST00000535202 GGA1Q9UJY5 639 aa10.9□□□□□ -0.66
SFSWAP-202ENST00000535202 CNTNAP1P78357 1384 aa10.9□□□□□ -0.67
SFSWAP-202ENST00000535202 G3V3G9 751 aa10.89□□□□□ -0.67
SFSWAP-202ENST00000535202 PSMD14O00487 310 aa10.89□□□□□ -0.67
SFSWAP-202ENST00000535202 DCAF8Q5TAQ9 597 aa10.89□□□□□ -0.67
SFSWAP-202ENST00000535202 CDC5LQ99459 802 aaKnown RBP10.89□□□□□ -0.67
SFSWAP-202ENST00000535202 ZC3H12CQ9C0D7 883 aaKnown RBP10.89□□□□□ -0.67
SFSWAP-202ENST00000535202 GREM2Q9H772 168 aa10.89□□□□□ -0.67
SFSWAP-202ENST00000535202 PODXL2Q9NZ53 605 aa10.89□□□□□ -0.67
SFSWAP-202ENST00000535202 ZBTB12Q9Y330 459 aaPredicted RBP10.89□□□□□ -0.67
SFSWAP-202ENST00000535202 TRPM7Q96QT4 1865 aa10.89□□□□□ -0.67
SFSWAP-202ENST00000535202 SHTN1A0MZ66 631 aa10.88□□□□□ -0.67
SFSWAP-202ENST00000535202 H7C1W4 665 aa10.88□□□□□ -0.67
SFSWAP-202ENST00000535202 HSPA1AP0DMV8 641 aaKnown RBP10.88□□□□□ -0.67
SFSWAP-202ENST00000535202 HSPA1BP0DMV9 641 aaKnown RBP10.88□□□□□ -0.67
SFSWAP-202ENST00000535202 FMR1Q06787 632 aaKnown RBP eCLIP10.88□□□□□ -0.67
SFSWAP-202ENST00000535202 GCKRQ14397 625 aa10.88□□□□□ -0.67
SFSWAP-202ENST00000535202 MICALL2Q8IY33 904 aa10.88□□□□□ -0.67
SFSWAP-202ENST00000535202 TTLL11Q8NHH1 800 aa10.88□□□□□ -0.67
SFSWAP-202ENST00000535202 TRPM4Q8TD43 1214 aa10.88□□□□□ -0.67
SFSWAP-202ENST00000535202 CNOT7Q9UIV1 285 aaKnown RBP10.88□□□□□ -0.67
SFSWAP-202ENST00000535202 SCN9AQ15858 1988 aa10.88□□□□□ -0.67
SFSWAP-202ENST00000535202 XDHP47989 1333 aa10.87□□□□□ -0.67
SFSWAP-202ENST00000535202 F6X3S4 739 aa10.87□□□□□ -0.67
SFSWAP-202ENST00000535202 H7C1D1 291 aa10.87□□□□□ -0.67
SFSWAP-202ENST00000535202 TRAF5O00463 557 aa10.87□□□□□ -0.67
SFSWAP-202ENST00000535202 IFFO2Q5TF58 517 aa10.87□□□□□ -0.67
SFSWAP-202ENST00000535202 LINS1Q8NG48 757 aa10.87□□□□□ -0.67
SFSWAP-202ENST00000535202 KCNQ5Q9NR82 932 aa10.87□□□□□ -0.67
SFSWAP-202ENST00000535202 ABT1Q9ULW3 272 aaKnown RBP10.87□□□□□ -0.67
SFSWAP-202ENST00000535202 RTL9Q8NET4 1388 aa10.87□□□□□ -0.67
SFSWAP-202ENST00000535202 ATP2B4P23634 1241 aa10.86□□□□□ -0.67
SFSWAP-202ENST00000535202 IGHMBP2P38935 993 aaKnown RBP10.86□□□□□ -0.67
SFSWAP-202ENST00000535202 VEGFBP49765 207 aa10.86□□□□□ -0.67
SFSWAP-202ENST00000535202 HIRAP54198 1017 aaPredicted RBP10.86□□□□□ -0.67
SFSWAP-202ENST00000535202 CASP7P55210 303 aa10.86□□□□□ -0.67
SFSWAP-202ENST00000535202 FAM161AQ3B820 660 aa10.86□□□□□ -0.67
SFSWAP-202ENST00000535202 YTHDC1Q96MU7 727 aaKnown RBP10.86□□□□□ -0.67
SFSWAP-202ENST00000535202 PLA2G12BQ9BX93 195 aa10.86□□□□□ -0.67
SFSWAP-202ENST00000535202 BSDC1Q9NW68 430 aaPredicted RBP10.86□□□□□ -0.67
SFSWAP-202ENST00000535202 PSME4Q14997 1843 aa10.86□□□□□ -0.67
SFSWAP-202ENST00000535202 ZNF521Q96K83 1311 aa10.85□□□□□ -0.67
SFSWAP-202ENST00000535202 ITGA6P23229 1130 aa10.85□□□□□ -0.67
SFSWAP-202ENST00000535202 RPS12P25398 132 aaKnown RBP10.85□□□□□ -0.67
SFSWAP-202ENST00000535202 DEFB115Q30KQ5 88 aa10.85□□□□□ -0.67
SFSWAP-202ENST00000535202 TBC1D10BQ4KMP7 808 aaPredicted RBP10.85□□□□□ -0.67
SFSWAP-202ENST00000535202 RBM26Q5T8P6 1007 aaKnown RBP10.85□□□□□ -0.67
SFSWAP-202ENST00000535202 ERICH6BQ5W0A0 696 aa10.85□□□□□ -0.67
SFSWAP-202ENST00000535202 PAXIP1Q6ZW49 1069 aaPredicted RBP10.85□□□□□ -0.67
SFSWAP-202ENST00000535202 SAMD7Q7Z3H4 446 aa10.85□□□□□ -0.67
SFSWAP-202ENST00000535202 DPF2Q92785 391 aa10.85□□□□□ -0.67
SFSWAP-202ENST00000535202 GLIS2Q9BZE0 524 aaPredicted RBP10.85□□□□□ -0.67
SFSWAP-202ENST00000535202 MINPP1Q9UNW1 487 aa10.85□□□□□ -0.67
SFSWAP-202ENST00000535202 RASSF10A6NK89 507 aa10.84□□□□□ -0.67
SFSWAP-202ENST00000535202 CELF2O95319 508 aaKnown RBP10.84□□□□□ -0.67
SFSWAP-202ENST00000535202 BEND3Q5T5X7 828 aa10.84□□□□□ -0.67
SFSWAP-202ENST00000535202 COL13A1Q5TAT6 717 aaPredicted RBP10.84□□□□□ -0.67
SFSWAP-202ENST00000535202 SLC4A10Q6U841 1118 aa10.84□□□□□ -0.67
SFSWAP-202ENST00000535202 ZC3H15Q8WU90 426 aaKnown RBP10.84□□□□□ -0.67
SFSWAP-202ENST00000535202 MPHOSPH8Q99549 860 aa10.84□□□□□ -0.67
SFSWAP-202ENST00000535202 ZNF408Q9H9D4 720 aa10.84□□□□□ -0.67
SFSWAP-202ENST00000535202 CHMP3Q9Y3E7 222 aa10.84□□□□□ -0.67
SFSWAP-202ENST00000535202 MED23Q9ULK4 1368 aa10.83□□□□□ -0.68
SFSWAP-202ENST00000535202 ANKRD18BA2A2Z9 1011 aa10.83□□□□□ -0.68
SFSWAP-202ENST00000535202 WTIPA6NIX2 430 aaPredicted RBP10.83□□□□□ -0.68
SFSWAP-202ENST00000535202 EGFRP00533 1210 aa10.83□□□□□ -0.68
SFSWAP-202ENST00000535202 CSF1RP07333 972 aa10.83□□□□□ -0.68
SFSWAP-202ENST00000535202 VIL1P09327 827 aaKnown RBP10.83□□□□□ -0.68
SFSWAP-202ENST00000535202 CCT4P50991 539 aaKnown RBP10.83□□□□□ -0.68
SFSWAP-202ENST00000535202 GRM1Q13255 1194 aa10.83□□□□□ -0.68
SFSWAP-202ENST00000535202 CST9Q5W186 159 aa10.83□□□□□ -0.68
SFSWAP-202ENST00000535202 CDC37L1Q7L3B6 337 aa10.83□□□□□ -0.68
SFSWAP-202ENST00000535202 PGAP2Q9UHJ9 254 aa10.83□□□□□ -0.68
SFSWAP-202ENST00000535202 POLR2AP24928 1970 aaKnown RBP10.83□□□□□ -0.68
SFSWAP-202ENST00000535202 WDR33Q9C0J8 1336 aaKnown RBP10.83□□□□□ -0.68
SFSWAP-202ENST00000535202 A0A1B0GUL6 1792 aa10.82□□□□□ -0.68
SFSWAP-202ENST00000535202 E9PSI1 815 aa10.82□□□□□ -0.68
SFSWAP-202ENST00000535202 KIF4BQ2VIQ3 1234 aa10.82□□□□□ -0.68
SFSWAP-202ENST00000535202 RSBN1LQ6PCB5 846 aaPredicted RBP10.82□□□□□ -0.68
SFSWAP-202ENST00000535202 PODNQ7Z5L7 613 aa10.82□□□□□ -0.68
SFSWAP-202ENST00000535202 USP48Q86UV5 1035 aa10.82□□□□□ -0.68
SFSWAP-202ENST00000535202 FBXW7Q969H0 707 aa10.82□□□□□ -0.68
SFSWAP-202ENST00000535202 AIDAQ96BJ3 306 aa10.82□□□□□ -0.68
SFSWAP-202ENST00000535202 ANKRD2Q9GZV1 360 aa10.82□□□□□ -0.68
SFSWAP-202ENST00000535202 C9orf78Q9NZ63 289 aaPredicted RBP10.82□□□□□ -0.68
SFSWAP-202ENST00000535202 TLL2Q9Y6L7 1015 aa10.82□□□□□ -0.68
SFSWAP-202ENST00000535202 USP17L3A6NCW0 530 aa10.81□□□□□ -0.68
SFSWAP-202ENST00000535202 USP17L4A6NCW7 530 aa10.81□□□□□ -0.68
SFSWAP-202ENST00000535202 GRM8O00222 908 aa10.81□□□□□ -0.68
SFSWAP-202ENST00000535202 FOXN1O15353 648 aa10.81□□□□□ -0.68
SFSWAP-202ENST00000535202 KCNJ4P48050 445 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms