RNA–Protein interactions for RNA: ENST00000535120.1

MRE11-205, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 2

Gene MRE11, Length 234 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-205ENST00000535120 ANKRD13DQ6ZTN6 518 aa9.44□□□□□ -0.9
MRE11-205ENST00000535120 TMC4Q7Z404 712 aa9.44□□□□□ -0.9
MRE11-205ENST00000535120 JARID2Q92833 1246 aaPredicted RBP9.44□□□□□ -0.9
MRE11-205ENST00000535120 FBXW7Q969H0 707 aa9.44□□□□□ -0.9
MRE11-205ENST00000535120 RPS12P25398 132 aaKnown RBP9.43□□□□□ -0.9
MRE11-205ENST00000535120 RPS8P62241 208 aaKnown RBP9.43□□□□□ -0.9
MRE11-205ENST00000535120 MKRN3Q13064 507 aaKnown RBP9.43□□□□□ -0.9
MRE11-205ENST00000535120 TTLL12Q14166 644 aaPredicted RBP9.43□□□□□ -0.9
MRE11-205ENST00000535120 ANGEL2Q5VTE6 544 aaKnown RBP9.43□□□□□ -0.9
MRE11-205ENST00000535120 PRAMEF18Q5VWM3 479 aa9.43□□□□□ -0.9
MRE11-205ENST00000535120 PLBD2Q8NHP8 589 aa9.43□□□□□ -0.9
MRE11-205ENST00000535120 TBC1D16Q8TBP0 767 aa9.43□□□□□ -0.9
MRE11-205ENST00000535120 CDCA5Q96FF9 252 aa9.43□□□□□ -0.9
MRE11-205ENST00000535120 SEC31BQ9NQW1 1179 aa9.43□□□□□ -0.9
MRE11-205ENST00000535120 RTL9Q8NET4 1388 aa9.42□□□□□ -0.9
MRE11-205ENST00000535120 SCARF1Q14162 830 aa9.42□□□□□ -0.9
MRE11-205ENST00000535120 MOB2Q70IA6 237 aa9.42□□□□□ -0.9
MRE11-205ENST00000535120 RIC3Q7Z5B4 369 aa9.42□□□□□ -0.9
MRE11-205ENST00000535120 CSRNP1Q96S65 589 aa9.42□□□□□ -0.9
MRE11-205ENST00000535120 GGA1Q9UJY5 639 aa9.42□□□□□ -0.9
MRE11-205ENST00000535120 HDAC9Q9UKV0 1011 aa9.42□□□□□ -0.9
MRE11-205ENST00000535120 DLG5Q8TDM6 1919 aa9.42□□□□□ -0.9
MRE11-205ENST00000535120 UBE2Q2LH0YL09 131 aa9.41□□□□□ -0.9
MRE11-205ENST00000535120 ELL2O00472 640 aaPredicted RBP9.41□□□□□ -0.9
MRE11-205ENST00000535120 TBC1D8O95759 1140 aa9.41□□□□□ -0.9
MRE11-205ENST00000535120 SLC10A3P09131 477 aa9.41□□□□□ -0.9
MRE11-205ENST00000535120 SF3B3Q15393 1217 aaKnown RBP9.41□□□□□ -0.9
MRE11-205ENST00000535120 ISCA1Q9BUE6 129 aa9.41□□□□□ -0.9
MRE11-205ENST00000535120 BABAM1Q9NWV8 329 aa9.41□□□□□ -0.9
MRE11-205ENST00000535120 SAGE1Q9NXZ1 904 aa9.41□□□□□ -0.9
MRE11-205ENST00000535120 DUOX1Q9NRD9 1551 aa9.41□□□□□ -0.9
MRE11-205ENST00000535120 TAF1P21675 1872 aa9.4□□□□□ -0.9
MRE11-205ENST00000535120 CHL1O00533 1208 aa9.4□□□□□ -0.9
MRE11-205ENST00000535120 VIL1P09327 827 aaKnown RBP9.4□□□□□ -0.9
MRE11-205ENST00000535120 GOLGA2Q08379 1002 aa9.4□□□□□ -0.9
MRE11-205ENST00000535120 PRKG1Q13976 671 aa9.4□□□□□ -0.9
MRE11-205ENST00000535120 WDR43Q15061 677 aaKnown RBP eCLIP9.4□□□□□ -0.9
MRE11-205ENST00000535120 DUSP27Q5VZP5 1158 aa9.4□□□□□ -0.9
MRE11-205ENST00000535120 CTU1Q7Z7A3 348 aaKnown RBP9.4□□□□□ -0.9
MRE11-205ENST00000535120 RASAL3Q86YV0 1011 aa9.4□□□□□ -0.9
MRE11-205ENST00000535120 MYD88Q99836 296 aa9.4□□□□□ -0.9
MRE11-205ENST00000535120 DBF4Q9UBU7 674 aaPredicted RBP9.4□□□□□ -0.9
MRE11-205ENST00000535120 USP17L8P0C7I0 530 aa9.39□□□□□ -0.91
MRE11-205ENST00000535120 CCDC152Q4G0S7 254 aa9.39□□□□□ -0.91
MRE11-205ENST00000535120 RSBN1LQ6PCB5 846 aaPredicted RBP9.39□□□□□ -0.91
MRE11-205ENST00000535120 MXD3Q9BW11 206 aa9.39□□□□□ -0.91
MRE11-205ENST00000535120 MYOZ2Q9NPC6 264 aa9.39□□□□□ -0.91
MRE11-205ENST00000535120 HYPKQ9NX55 129 aa9.39□□□□□ -0.91
MRE11-205ENST00000535120 HPS5Q9UPZ3 1129 aa9.39□□□□□ -0.91
MRE11-205ENST00000535120 LAMB2P55268 1798 aa9.38□□□□□ -0.91
MRE11-205ENST00000535120 WTIPA6NIX2 430 aaPredicted RBP9.38□□□□□ -0.91
MRE11-205ENST00000535120 ANKRD18AQ8IVF6 992 aa9.38□□□□□ -0.91
MRE11-205ENST00000535120 ZBTB38Q8NAP3 1195 aaPredicted RBP9.38□□□□□ -0.91
MRE11-205ENST00000535120 PHAXQ9H814 394 aaKnown RBP9.38□□□□□ -0.91
MRE11-205ENST00000535120 TRIM35Q9UPQ4 493 aa9.38□□□□□ -0.91
MRE11-205ENST00000535120 COL4A1P02462 1669 aa9.38□□□□□ -0.91
MRE11-205ENST00000535120 USP17L3A6NCW0 530 aa9.37□□□□□ -0.91
MRE11-205ENST00000535120 USP17L4A6NCW7 530 aa9.37□□□□□ -0.91
MRE11-205ENST00000535120 ZNF280AP59817 542 aaPredicted RBP9.37□□□□□ -0.91
MRE11-205ENST00000535120 NBPF9Q3BBW0 867 aa9.37□□□□□ -0.91
MRE11-205ENST00000535120 USP17L1Q7RTZ2 530 aa9.37□□□□□ -0.91
MRE11-205ENST00000535120 AGBL3Q8NEM8 1001 aa9.37□□□□□ -0.91
MRE11-205ENST00000535120 ZNF296Q8WUU4 475 aaPredicted RBP9.37□□□□□ -0.91
MRE11-205ENST00000535120 RUNDC1Q96C34 613 aa9.37□□□□□ -0.91
MRE11-205ENST00000535120 PCDH10Q9P2E7 1040 aa9.37□□□□□ -0.91
MRE11-205ENST00000535120 PDE8AO60658 829 aa9.36□□□□□ -0.91
MRE11-205ENST00000535120 SASH1O94885 1247 aa9.36□□□□□ -0.91
MRE11-205ENST00000535120 HSP90B1P14625 803 aaKnown RBP9.36□□□□□ -0.91
MRE11-205ENST00000535120 NF2P35240 595 aa9.36□□□□□ -0.91
MRE11-205ENST00000535120 RALBP1Q15311 655 aa9.36□□□□□ -0.91
MRE11-205ENST00000535120 OGFOD1Q8N543 542 aa9.36□□□□□ -0.91
MRE11-205ENST00000535120 MBIPQ9NS73 344 aa9.36□□□□□ -0.91
MRE11-205ENST00000535120 CWC25Q9NXE8 425 aaPredicted RBP9.36□□□□□ -0.91
MRE11-205ENST00000535120 PODXL2Q9NZ53 605 aa9.36□□□□□ -0.91
MRE11-205ENST00000535120 XDHP47989 1333 aa9.35□□□□□ -0.91
MRE11-205ENST00000535120 ANKRD36CQ5JPF3 1778 aa9.35□□□□□ -0.91
MRE11-205ENST00000535120 ATP2B4P23634 1241 aa9.35□□□□□ -0.91
MRE11-205ENST00000535120 DDX10Q13206 875 aaKnown RBP9.35□□□□□ -0.91
MRE11-205ENST00000535120 TRIM28Q13263 835 aaKnown RBP9.35□□□□□ -0.91
MRE11-205ENST00000535120 PRPF38BQ5VTL8 546 aaKnown RBP9.35□□□□□ -0.91
MRE11-205ENST00000535120 REM2Q8IYK8 340 aaPredicted RBP9.35□□□□□ -0.91
MRE11-205ENST00000535120 FZD1Q9UP38 647 aa9.35□□□□□ -0.91
MRE11-205ENST00000535120 ADAMTS8Q9UP79 889 aa9.35□□□□□ -0.91
MRE11-205ENST00000535120 GPR25O00155 361 aa9.34□□□□□ -0.91
MRE11-205ENST00000535120 PCCAP05165 728 aaPredicted RBP9.34□□□□□ -0.91
MRE11-205ENST00000535120 HOXB7P09629 217 aa9.34□□□□□ -0.91
MRE11-205ENST00000535120 FKBP1BP68106 108 aa9.34□□□□□ -0.91
MRE11-205ENST00000535120 KIAA0825Q8IV33 1275 aa9.34□□□□□ -0.91
MRE11-205ENST00000535120 CCDC191Q8NCU4 936 aa9.34□□□□□ -0.91
MRE11-205ENST00000535120 GMLQ99445 158 aa9.34□□□□□ -0.91
MRE11-205ENST00000535120 CDC5LQ99459 802 aaKnown RBP9.34□□□□□ -0.91
MRE11-205ENST00000535120 R3HDMLQ9H3Y0 253 aa9.34□□□□□ -0.91
MRE11-205ENST00000535120 DDX60Q8IY21 1712 aaKnown RBP9.34□□□□□ -0.92
MRE11-205ENST00000535120 POLR2AP24928 1970 aaKnown RBP9.33□□□□□ -0.92
MRE11-205ENST00000535120 WNT10BO00744 389 aa9.33□□□□□ -0.92
MRE11-205ENST00000535120 FKTNO75072 461 aa9.33□□□□□ -0.92
MRE11-205ENST00000535120 DDX58O95786 925 aaKnown RBP9.33□□□□□ -0.92
MRE11-205ENST00000535120 CTSWP56202 376 aa9.33□□□□□ -0.92
MRE11-205ENST00000535120 PTPN12Q05209 780 aaKnown RBP9.33□□□□□ -0.92
MRE11-205ENST00000535120 PKN2Q16513 984 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms