RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 SERPINB2P05120 415 aa24.8■■□□□ 1.56
TNFRSF1A-205ENST00000534885 DEFB132Q7Z7B7 95 aa24.8■■□□□ 1.56
TNFRSF1A-205ENST00000534885 FLAD1Q8NFF5 587 aa24.8■■□□□ 1.56
TNFRSF1A-205ENST00000534885 AKAP2Q9Y2D5 859 aa24.8■■□□□ 1.56
TNFRSF1A-205ENST00000534885 IGHMBP2P38935 993 aaKnown RBP24.79■■□□□ 1.56
TNFRSF1A-205ENST00000534885 SF3B2Q13435 895 aaKnown RBP24.79■■□□□ 1.56
TNFRSF1A-205ENST00000534885 CNTROBQ8N137 903 aa24.79■■□□□ 1.56
TNFRSF1A-205ENST00000534885 CDC5LQ99459 802 aaKnown RBP24.79■■□□□ 1.56
TNFRSF1A-205ENST00000534885 ATP5JP18859 108 aa24.79■■□□□ 1.56
TNFRSF1A-205ENST00000534885 CASC1Q6TDU7 716 aa24.79■■□□□ 1.56
TNFRSF1A-205ENST00000534885 ANP32EQ9BTT0 268 aa24.79■■□□□ 1.56
TNFRSF1A-205ENST00000534885 POLRMTO00411 1230 aaKnown RBP24.78■■□□□ 1.56
TNFRSF1A-205ENST00000534885 ANP32AP39687 249 aaKnown RBP24.78■■□□□ 1.56
TNFRSF1A-205ENST00000534885 HELBQ8NG08 1087 aaPredicted RBP24.78■■□□□ 1.56
TNFRSF1A-205ENST00000534885 PDE8BO95263 885 aa24.77■■□□□ 1.56
TNFRSF1A-205ENST00000534885 CHMLP26374 656 aa24.77■■□□□ 1.56
TNFRSF1A-205ENST00000534885 ADORA1P30542 326 aa24.77■■□□□ 1.56
TNFRSF1A-205ENST00000534885 BAG6P46379 1132 aa24.77■■□□□ 1.56
TNFRSF1A-205ENST00000534885 ATP2B3Q16720 1220 aa24.77■■□□□ 1.56
TNFRSF1A-205ENST00000534885 TBC1D32Q96NH3 1257 aa24.77■■□□□ 1.56
TNFRSF1A-205ENST00000534885 MROH5Q6ZUA9 1318 aa24.77■■□□□ 1.56
TNFRSF1A-205ENST00000534885 SLC15A2Q16348 729 aa24.76■■□□□ 1.55
TNFRSF1A-205ENST00000534885 ANKRD18AQ8IVF6 992 aa24.76■■□□□ 1.55
TNFRSF1A-205ENST00000534885 CELF1Q92879 486 aaKnown RBP24.76■■□□□ 1.55
TNFRSF1A-205ENST00000534885 XAGE2Q96GT9 111 aa24.76■■□□□ 1.55
TNFRSF1A-205ENST00000534885 NDUFB9Q9Y6M9 179 aa24.76■■□□□ 1.55
TNFRSF1A-205ENST00000534885 NLGN1Q8N2Q7 840 aa24.75■■□□□ 1.55
TNFRSF1A-205ENST00000534885 TAF5LO75529 589 aa24.74■■□□□ 1.55
TNFRSF1A-205ENST00000534885 EVI5LQ96CN4 794 aa24.74■■□□□ 1.55
TNFRSF1A-205ENST00000534885 EDC3Q96F86 508 aaKnown RBP24.74■■□□□ 1.55
TNFRSF1A-205ENST00000534885 C22orf23Q9BZE7 217 aa24.74■■□□□ 1.55
TNFRSF1A-205ENST00000534885 SNAP23O00161 211 aa24.73■■□□□ 1.55
TNFRSF1A-205ENST00000534885 ST5P78524 1137 aa24.73■■□□□ 1.55
TNFRSF1A-205ENST00000534885 STK32BQ9NY57 414 aa24.73■■□□□ 1.55
TNFRSF1A-205ENST00000534885 A0A1B0GUL6 1792 aa24.73■■□□□ 1.55
TNFRSF1A-205ENST00000534885 CHRNDQ07001 517 aa24.73■■□□□ 1.55
TNFRSF1A-205ENST00000534885 MSL1Q68DK7 614 aa24.73■■□□□ 1.55
TNFRSF1A-205ENST00000534885 BSDC1Q9NW68 430 aaPredicted RBP24.73■■□□□ 1.55
TNFRSF1A-205ENST00000534885 FGFR2P21802 821 aa24.72■■□□□ 1.55
TNFRSF1A-205ENST00000534885 PUM3Q15397 648 aaKnown RBP24.72■■□□□ 1.55
TNFRSF1A-205ENST00000534885 GORABQ5T7V8 394 aa24.72■■□□□ 1.55
TNFRSF1A-205ENST00000534885 DNAJC2Q99543 621 aaKnown RBP24.72■■□□□ 1.55
TNFRSF1A-205ENST00000534885 HAUS7Q99871 368 aa24.72■■□□□ 1.55
TNFRSF1A-205ENST00000534885 ESYT1Q9BSJ8 1104 aa24.72■■□□□ 1.55
TNFRSF1A-205ENST00000534885 QSER1Q2KHR3 1735 aa24.71■■□□□ 1.55
TNFRSF1A-205ENST00000534885 ARAP2Q8WZ64 1704 aa24.71■■□□□ 1.55
TNFRSF1A-205ENST00000534885 RPS8P62241 208 aaKnown RBP24.71■■□□□ 1.55
TNFRSF1A-205ENST00000534885 DDX46Q7L014 1031 aaKnown RBP24.71■■□□□ 1.55
TNFRSF1A-205ENST00000534885 IL25Q9H293 177 aa24.71■■□□□ 1.55
TNFRSF1A-205ENST00000534885 NRXN2Q9P2S2 1712 aa24.7■■□□□ 1.54
TNFRSF1A-205ENST00000534885 CCDC158Q5M9N0 1113 aa24.7■■□□□ 1.54
TNFRSF1A-205ENST00000534885 MMP10P09238 476 aa24.7■■□□□ 1.54
TNFRSF1A-205ENST00000534885 LPIN2Q92539 896 aa24.7■■□□□ 1.54
TNFRSF1A-205ENST00000534885 IFIT1P09914 478 aaKnown RBP24.69■■□□□ 1.54
TNFRSF1A-205ENST00000534885 TTC39AQ5SRH9 613 aa24.69■■□□□ 1.54
TNFRSF1A-205ENST00000534885 MINPP1Q9UNW1 487 aa24.69■■□□□ 1.54
TNFRSF1A-205ENST00000534885 CRY2Q49AN0 593 aa24.68■■□□□ 1.54
TNFRSF1A-205ENST00000534885 ANKRD31Q8N7Z5 1873 aa24.68■■□□□ 1.54
TNFRSF1A-205ENST00000534885 FSD1Q9BTV5 496 aa24.68■■□□□ 1.54
TNFRSF1A-205ENST00000534885 SCARF1Q14162 830 aa24.67■■□□□ 1.54
TNFRSF1A-205ENST00000534885 CWC27Q6UX04 472 aaKnown RBP24.67■■□□□ 1.54
TNFRSF1A-205ENST00000534885 EIF5BO60841 1220 aaKnown RBP24.66■■□□□ 1.54
TNFRSF1A-205ENST00000534885 REC8O95072 547 aa24.66■■□□□ 1.54
TNFRSF1A-205ENST00000534885 RBM25P49756 843 aaKnown RBP24.66■■□□□ 1.54
TNFRSF1A-205ENST00000534885 USP26Q9BXU7 913 aa24.66■■□□□ 1.54
TNFRSF1A-205ENST00000534885 DIAPH3Q9NSV4 1193 aa24.66■■□□□ 1.54
TNFRSF1A-205ENST00000534885 GOLIM4O00461 696 aa24.66■■□□□ 1.54
TNFRSF1A-205ENST00000534885 SLC5A1P13866 664 aa24.66■■□□□ 1.54
TNFRSF1A-205ENST00000534885 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.66■■□□□ 1.54
TNFRSF1A-205ENST00000534885 AKAP11Q9UKA4 1901 aa24.65■■□□□ 1.54
TNFRSF1A-205ENST00000534885 WTIPA6NIX2 430 aaPredicted RBP24.65■■□□□ 1.54
TNFRSF1A-205ENST00000534885 RPGRQ92834 1020 aaKnown RBP24.65■■□□□ 1.54
TNFRSF1A-205ENST00000534885 PAG1Q9NWQ8 432 aa24.65■■□□□ 1.54
TNFRSF1A-205ENST00000534885 PHKA1P46020 1223 aa24.65■■□□□ 1.54
TNFRSF1A-205ENST00000534885 GRAPQ13588 217 aa24.65■■□□□ 1.54
TNFRSF1A-205ENST00000534885 CCDC102BQ68D86 513 aa24.65■■□□□ 1.54
TNFRSF1A-205ENST00000534885 GRAPLQ8TC17 118 aaPredicted RBP24.65■■□□□ 1.54
TNFRSF1A-205ENST00000534885 PDGFDQ9GZP0 370 aaPredicted RBP24.65■■□□□ 1.54
TNFRSF1A-205ENST00000534885 SNRKQ9NRH2 765 aa24.65■■□□□ 1.54
TNFRSF1A-205ENST00000534885 PARP3Q9Y6F1 533 aa24.65■■□□□ 1.54
TNFRSF1A-205ENST00000534885 SGSM2O43147 1006 aa24.64■■□□□ 1.53
TNFRSF1A-205ENST00000534885 PI16Q6UXB8 463 aa24.64■■□□□ 1.53
TNFRSF1A-205ENST00000534885 SLC51AQ86UW1 340 aa24.64■■□□□ 1.53
TNFRSF1A-205ENST00000534885 ANTXR1Q9H6X2 564 aa24.63■■□□□ 1.53
TNFRSF1A-205ENST00000534885 MCAMP43121 646 aa24.63■■□□□ 1.53
TNFRSF1A-205ENST00000534885 FKBP4Q02790 459 aaKnown RBP eCLIP24.63■■□□□ 1.53
TNFRSF1A-205ENST00000534885 FAM227BQ96M60 508 aa24.63■■□□□ 1.53
TNFRSF1A-205ENST00000534885 IPO9Q96P70 1041 aaKnown RBP24.63■■□□□ 1.53
TNFRSF1A-205ENST00000534885 KLRG2A4D1S0 409 aaPredicted RBP24.62■■□□□ 1.53
TNFRSF1A-205ENST00000534885 KBTBD3Q8NAB2 608 aa24.62■■□□□ 1.53
TNFRSF1A-205ENST00000534885 ANO2Q9NQ90 1003 aa24.62■■□□□ 1.53
TNFRSF1A-205ENST00000534885 CHGBP05060 677 aa24.62■■□□□ 1.53
TNFRSF1A-205ENST00000534885 NMIQ13287 307 aaPredicted RBP24.62■■□□□ 1.53
TNFRSF1A-205ENST00000534885 CCDC125Q86Z20 511 aa24.62■■□□□ 1.53
TNFRSF1A-205ENST00000534885 ZNF512BQ96KM6 892 aaPredicted RBP24.62■■□□□ 1.53
TNFRSF1A-205ENST00000534885 HIP1O00291 1037 aa24.61■■□□□ 1.53
TNFRSF1A-205ENST00000534885 ZAP70P43403 619 aa24.61■■□□□ 1.53
TNFRSF1A-205ENST00000534885 BRIP1Q9BX63 1249 aa24.61■■□□□ 1.53
TNFRSF1A-205ENST00000534885 ARID4AP29374 1257 aaPredicted RBP24.6■■□□□ 1.53
TNFRSF1A-205ENST00000534885 A0A0D9SFI3 127 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms