RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 LMNB1P20700 586 aa11.51□□□□□ -0.57
CCDC90B-219ENST00000534753 C1QTNF8P60827 252 aa11.51□□□□□ -0.57
CCDC90B-219ENST00000534753 TCIRG1Q13488 830 aa11.51□□□□□ -0.57
CCDC90B-219ENST00000534753 PARP10Q53GL7 1025 aa11.51□□□□□ -0.57
CCDC90B-219ENST00000534753 HSP90AB3PQ58FF7 597 aa11.51□□□□□ -0.57
CCDC90B-219ENST00000534753 RTL5Q5HYW3 569 aaPredicted RBP11.51□□□□□ -0.57
CCDC90B-219ENST00000534753 RIC3Q7Z5B4 369 aa11.51□□□□□ -0.57
CCDC90B-219ENST00000534753 PHAXQ9H814 394 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-219ENST00000534753 TRMT112Q9UI30 125 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-219ENST00000534753 HCLS1P14317 486 aaPredicted RBP11.5□□□□□ -0.57
CCDC90B-219ENST00000534753 ALDH1B1P30837 517 aa11.5□□□□□ -0.57
CCDC90B-219ENST00000534753 PRELPP51888 382 aa11.5□□□□□ -0.57
CCDC90B-219ENST00000534753 CCDC27Q2M243 656 aa11.5□□□□□ -0.57
CCDC90B-219ENST00000534753 CCDC30Q5VVM6 783 aa11.5□□□□□ -0.57
CCDC90B-219ENST00000534753 NLRP10Q86W26 655 aa11.5□□□□□ -0.57
CCDC90B-219ENST00000534753 SYNE4Q8N205 404 aa11.5□□□□□ -0.57
CCDC90B-219ENST00000534753 PLBD2Q8NHP8 589 aa11.5□□□□□ -0.57
CCDC90B-219ENST00000534753 FAM163AQ96GL9 167 aaPredicted RBP11.5□□□□□ -0.57
CCDC90B-219ENST00000534753 NLRP3Q96P20 1036 aa11.5□□□□□ -0.57
CCDC90B-219ENST00000534753 NMRK2Q9NPI5 230 aa11.5□□□□□ -0.57
CCDC90B-219ENST00000534753 NPDC1Q9NQX5 325 aaPredicted RBP11.5□□□□□ -0.57
CCDC90B-219ENST00000534753 SLX4Q8IY92 1834 aa11.5□□□□□ -0.57
CCDC90B-219ENST00000534753 TNRC6CQ9HCJ0 1690 aaKnown RBP11.49□□□□□ -0.57
CCDC90B-219ENST00000534753 TWISTNBQ3B726 338 aaPredicted RBP11.49□□□□□ -0.57
CCDC90B-219ENST00000534753 RBM17Q96I25 401 aaKnown RBP11.49□□□□□ -0.57
CCDC90B-219ENST00000534753 STK31Q9BXU1 1019 aa11.49□□□□□ -0.57
CCDC90B-219ENST00000534753 TAOK3Q9H2K8 898 aa11.49□□□□□ -0.57
CCDC90B-219ENST00000534753 KLRG2A4D1S0 409 aaPredicted RBP11.48□□□□□ -0.57
CCDC90B-219ENST00000534753 CCDC93Q567U6 631 aa11.48□□□□□ -0.57
CCDC90B-219ENST00000534753 SOGA3Q5TF21 947 aa11.48□□□□□ -0.57
CCDC90B-219ENST00000534753 C16orf71Q8IYS4 520 aaPredicted RBP11.48□□□□□ -0.57
CCDC90B-219ENST00000534753 MYD88Q99836 296 aa11.48□□□□□ -0.57
CCDC90B-219ENST00000534753 RRAGCQ9HB90 399 aa11.48□□□□□ -0.57
CCDC90B-219ENST00000534753 KDM2BQ8NHM5 1336 aa11.48□□□□□ -0.57
CCDC90B-219ENST00000534753 FANCIQ9NVI1 1328 aa11.47□□□□□ -0.57
CCDC90B-219ENST00000534753 SLC51AQ86UW1 340 aa11.47□□□□□ -0.57
CCDC90B-219ENST00000534753 PARP9Q8IXQ6 854 aa11.47□□□□□ -0.57
CCDC90B-219ENST00000534753 JARID2Q92833 1246 aaPredicted RBP11.47□□□□□ -0.57
CCDC90B-219ENST00000534753 FAM89AQ96GI7 184 aa11.47□□□□□ -0.57
CCDC90B-219ENST00000534753 EPAS1Q99814 870 aa11.47□□□□□ -0.57
CCDC90B-219ENST00000534753 FAM117AQ9C073 453 aa11.47□□□□□ -0.57
CCDC90B-219ENST00000534753 ZNF277Q9NRM2 450 aaPredicted RBP11.47□□□□□ -0.57
CCDC90B-219ENST00000534753 SBF1O95248 1867 aa11.46□□□□□ -0.57
CCDC90B-219ENST00000534753 IBTKQ9P2D0 1353 aaPredicted RBP11.46□□□□□ -0.57
CCDC90B-219ENST00000534753 IL16Q14005 1332 aa11.46□□□□□ -0.57
CCDC90B-219ENST00000534753 SH3TC1Q8TE82 1336 aa11.46□□□□□ -0.57
CCDC90B-219ENST00000534753 PPEF1O14829 653 aaPredicted RBP11.46□□□□□ -0.57
CCDC90B-219ENST00000534753 DDX58O95786 925 aaKnown RBP11.46□□□□□ -0.57
CCDC90B-219ENST00000534753 NUDT7P0C024 238 aa11.46□□□□□ -0.57
CCDC90B-219ENST00000534753 HOXB3P14651 431 aaPredicted RBP11.46□□□□□ -0.57
CCDC90B-219ENST00000534753 EXOSC9Q06265 439 aaKnown RBP11.46□□□□□ -0.57
CCDC90B-219ENST00000534753 CRY2Q49AN0 593 aa11.46□□□□□ -0.57
CCDC90B-219ENST00000534753 ARSIQ5FYB1 569 aa11.46□□□□□ -0.57
CCDC90B-219ENST00000534753 WDR63Q8IWG1 891 aa11.46□□□□□ -0.57
CCDC90B-219ENST00000534753 SLAIN1Q8ND83 568 aa11.46□□□□□ -0.57
CCDC90B-219ENST00000534753 CHMP4AQ9BY43 222 aa11.46□□□□□ -0.57
CCDC90B-219ENST00000534753 TMX4Q9H1E5 349 aaPredicted RBP11.46□□□□□ -0.57
CCDC90B-219ENST00000534753 CCDC88AQ3V6T2 1871 aa11.46□□□□□ -0.58
CCDC90B-219ENST00000534753 ANKRD36CQ5JPF3 1778 aa11.46□□□□□ -0.58
CCDC90B-219ENST00000534753 AMHR2Q16671 573 aa11.45□□□□□ -0.58
CCDC90B-219ENST00000534753 SLC10A5Q5PT55 438 aa11.45□□□□□ -0.58
CCDC90B-219ENST00000534753 TYW1BQ6NUM6 668 aa11.45□□□□□ -0.58
CCDC90B-219ENST00000534753 DDX46Q7L014 1031 aaKnown RBP11.45□□□□□ -0.58
CCDC90B-219ENST00000534753 RTKN2Q8IZC4 609 aa11.45□□□□□ -0.58
CCDC90B-219ENST00000534753 C7orf43Q8WVR3 580 aa11.45□□□□□ -0.58
CCDC90B-219ENST00000534753 ISCA1Q9BUE6 129 aa11.45□□□□□ -0.58
CCDC90B-219ENST00000534753 MAP3K2Q9Y2U5 619 aa11.45□□□□□ -0.58
CCDC90B-219ENST00000534753 HOXA10P31260 410 aaPredicted RBP11.44□□□□□ -0.58
CCDC90B-219ENST00000534753 FKBP4Q02790 459 aaKnown RBP eCLIP11.44□□□□□ -0.58
CCDC90B-219ENST00000534753 G2E3Q7L622 706 aa11.44□□□□□ -0.58
CCDC90B-219ENST00000534753 CRAMP1Q96RY5 1269 aa11.44□□□□□ -0.58
CCDC90B-219ENST00000534753 MYH16Q9H6N6 1097 aa11.44□□□□□ -0.58
CCDC90B-219ENST00000534753 ARFGEF2Q9Y6D5 1785 aa11.44□□□□□ -0.58
CCDC90B-219ENST00000534753 TIAM2Q8IVF5 1701 aa11.43□□□□□ -0.58
CCDC90B-219ENST00000534753 ABCC4O15439 1325 aa11.43□□□□□ -0.58
CCDC90B-219ENST00000534753 RNF123Q5XPI4 1314 aa11.43□□□□□ -0.58
CCDC90B-219ENST00000534753 FER1L6Q2WGJ9 1857 aa11.43□□□□□ -0.58
CCDC90B-219ENST00000534753 PI4KAP2A4QPH2 592 aa11.43□□□□□ -0.58
CCDC90B-219ENST00000534753 GLTPD2A6NH11 291 aa11.43□□□□□ -0.58
CCDC90B-219ENST00000534753 IRS4O14654 1257 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-219ENST00000534753 FOSBP53539 338 aa11.43□□□□□ -0.58
CCDC90B-219ENST00000534753 FAM161AQ3B820 660 aa11.43□□□□□ -0.58
CCDC90B-219ENST00000534753 PI4KAP1Q8N8J0 262 aa11.43□□□□□ -0.58
CCDC90B-219ENST00000534753 CCDC85AQ96PX6 553 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-219ENST00000534753 LTBP3Q9NS15 1303 aa11.42□□□□□ -0.58
CCDC90B-219ENST00000534753 TOMM70O94826 608 aa11.42□□□□□ -0.58
CCDC90B-219ENST00000534753 DDNO94850 711 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-219ENST00000534753 IARSP41252 1262 aaKnown RBP11.42□□□□□ -0.58
CCDC90B-219ENST00000534753 NEXNQ0ZGT2 675 aa11.42□□□□□ -0.58
CCDC90B-219ENST00000534753 FKBP5Q13451 457 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-219ENST00000534753 KSR2Q6VAB6 950 aa11.42□□□□□ -0.58
CCDC90B-219ENST00000534753 ZNF454Q8N9F8 522 aa11.42□□□□□ -0.58
CCDC90B-219ENST00000534753 METTL22Q9BUU2 404 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-219ENST00000534753 SCUBE2Q9NQ36 999 aa11.42□□□□□ -0.58
CCDC90B-219ENST00000534753 CWC25Q9NXE8 425 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-219ENST00000534753 RIC1Q4ADV7 1423 aa11.42□□□□□ -0.58
CCDC90B-219ENST00000534753 VAMP4O75379 141 aa11.41□□□□□ -0.58
CCDC90B-219ENST00000534753 TTLL12Q14166 644 aaPredicted RBP11.41□□□□□ -0.58
CCDC90B-219ENST00000534753 CWF19L2Q2TBE0 894 aaKnown RBP11.41□□□□□ -0.58
CCDC90B-219ENST00000534753 CC2D2BQ6DHV5 1058 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms