RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 HMGB2P26583 209 aaKnown RBP16.09■□□□□ 0.17
BEST1-208ENST00000534553 ATP2B3Q16720 1220 aa16.09■□□□□ 0.17
BEST1-208ENST00000534553 MCMDC2Q4G0Z9 681 aa16.09■□□□□ 0.17
BEST1-208ENST00000534553 TTC39AQ5SRH9 613 aa16.09■□□□□ 0.17
BEST1-208ENST00000534553 TMX3Q96JJ7 454 aa16.09■□□□□ 0.17
BEST1-208ENST00000534553 RBM8AQ9Y5S9 174 aaKnown RBP16.09■□□□□ 0.17
BEST1-208ENST00000534553 NTSR2O95665 410 aa16.08■□□□□ 0.17
BEST1-208ENST00000534553 MCM4P33991 863 aa16.08■□□□□ 0.17
BEST1-208ENST00000534553 PTH1RQ03431 593 aa16.08■□□□□ 0.17
BEST1-208ENST00000534553 KRT32Q14532 448 aa16.08■□□□□ 0.17
BEST1-208ENST00000534553 XAGE2Q96GT9 111 aa16.08■□□□□ 0.17
BEST1-208ENST00000534553 BTAF1O14981 1849 aa16.08■□□□□ 0.16
BEST1-208ENST00000534553 RPS6KA4O75676 772 aa16.08■□□□□ 0.16
BEST1-208ENST00000534553 PDE8BO95263 885 aa16.08■□□□□ 0.16
BEST1-208ENST00000534553 TSGA10IPQ3SY00 556 aa16.08■□□□□ 0.16
BEST1-208ENST00000534553 VPS53Q5VIR6 699 aa16.08■□□□□ 0.16
BEST1-208ENST00000534553 USPL1Q5W0Q7 1092 aa16.08■□□□□ 0.16
BEST1-208ENST00000534553 CLEC17AQ6ZS10 378 aa16.08■□□□□ 0.16
BEST1-208ENST00000534553 SYNE4Q8N205 404 aa16.08■□□□□ 0.16
BEST1-208ENST00000534553 SCN7AQ01118 1682 aa16.07■□□□□ 0.16
BEST1-208ENST00000534553 GOLIM4O00461 696 aa16.07■□□□□ 0.16
BEST1-208ENST00000534553 SSFA2P28290 1259 aa16.07■□□□□ 0.16
BEST1-208ENST00000534553 CREB3L3Q68CJ9 461 aa16.07■□□□□ 0.16
BEST1-208ENST00000534553 PRPF40BQ6NWY9 871 aaKnown RBP16.07■□□□□ 0.16
BEST1-208ENST00000534553 DDX46Q7L014 1031 aaKnown RBP16.07■□□□□ 0.16
BEST1-208ENST00000534553 CCDC85AQ96PX6 553 aaPredicted RBP16.07■□□□□ 0.16
BEST1-208ENST00000534553 ZSWIM6Q9HCJ5 1215 aa16.07■□□□□ 0.16
BEST1-208ENST00000534553 U3KPZ7 1027 aaPredicted RBP16.07■□□□□ 0.16
BEST1-208ENST00000534553 TAF5LO75529 589 aa16.06■□□□□ 0.16
BEST1-208ENST00000534553 PUM3Q15397 648 aaKnown RBP16.06■□□□□ 0.16
BEST1-208ENST00000534553 VGLL2Q8N8G2 317 aa16.06■□□□□ 0.16
BEST1-208ENST00000534553 TTC14Q96N46 770 aa16.06■□□□□ 0.16
BEST1-208ENST00000534553 UPF3BQ9BZI7 483 aaKnown RBP16.06■□□□□ 0.16
BEST1-208ENST00000534553 CYP46A1Q9Y6A2 500 aa16.06■□□□□ 0.16
BEST1-208ENST00000534553 RASEFQ8IZ41 740 aa16.05■□□□□ 0.16
BEST1-208ENST00000534553 LPIN2Q92539 896 aa16.05■□□□□ 0.16
BEST1-208ENST00000534553 TNPO1Q92973 898 aaKnown RBP16.05■□□□□ 0.16
BEST1-208ENST00000534553 EDC3Q96F86 508 aaKnown RBP16.05■□□□□ 0.16
BEST1-208ENST00000534553 MPHOSPH8Q99549 860 aa16.05■□□□□ 0.16
BEST1-208ENST00000534553 NYXQ9GZU5 481 aa16.05■□□□□ 0.16
BEST1-208ENST00000534553 NARFQ9UHQ1 456 aa16.05■□□□□ 0.16
BEST1-208ENST00000534553 CCNL1Q9UK58 526 aaPredicted RBP16.05■□□□□ 0.16
BEST1-208ENST00000534553 RPAP1Q9BWH6 1393 aaPredicted RBP16.05■□□□□ 0.16
BEST1-208ENST00000534553 GOLGA6L22H0YM25 854 aa16.05■□□□□ 0.16
BEST1-208ENST00000534553 UQCRFS1P1P0C7P4 283 aa16.05■□□□□ 0.16
BEST1-208ENST00000534553 CASTP20810 708 aaKnown RBP16.05■□□□□ 0.16
BEST1-208ENST00000534553 IGHMBP2P38935 993 aaKnown RBP16.05■□□□□ 0.16
BEST1-208ENST00000534553 ANKRD1Q15327 319 aa16.05■□□□□ 0.16
BEST1-208ENST00000534553 TTF1Q15361 905 aaPredicted RBP16.05■□□□□ 0.16
BEST1-208ENST00000534553 ZMYM1Q5SVZ6 1142 aa16.05■□□□□ 0.16
BEST1-208ENST00000534553 ZSCAN25Q6NSZ9 544 aa16.05■□□□□ 0.16
BEST1-208ENST00000534553 ZSCAN31Q96LW9 406 aaPredicted RBP16.05■□□□□ 0.16
BEST1-208ENST00000534553 CDC5LQ99459 802 aaKnown RBP16.05■□□□□ 0.16
BEST1-208ENST00000534553 DSCC1Q9BVC3 393 aa16.05■□□□□ 0.16
BEST1-208ENST00000534553 LIMCH1Q9UPQ0 1083 aa16.05■□□□□ 0.16
BEST1-208ENST00000534553 SLC27A2O14975 620 aa16.04■□□□□ 0.16
BEST1-208ENST00000534553 RNF113AO15541 343 aaKnown RBP16.04■□□□□ 0.16
BEST1-208ENST00000534553 RUFY3Q7L099 469 aa16.04■□□□□ 0.16
BEST1-208ENST00000534553 JAKMIP1Q96N16 626 aaKnown RBP16.04■□□□□ 0.16
BEST1-208ENST00000534553 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.04■□□□□ 0.16
BEST1-208ENST00000534553 ALDH8A1Q9H2A2 487 aaPredicted RBP16.04■□□□□ 0.16
BEST1-208ENST00000534553 SH2B1Q9NRF2 756 aaPredicted RBP16.04■□□□□ 0.16
BEST1-208ENST00000534553 FOXD4L1Q9NU39 408 aa16.04■□□□□ 0.16
BEST1-208ENST00000534553 RTCBQ9Y3I0 505 aaKnown RBP16.04■□□□□ 0.16
BEST1-208ENST00000534553 LY75O60449 1722 aa16.04■□□□□ 0.16
BEST1-208ENST00000534553 CYP2E1P05181 493 aaPredicted RBP16.03■□□□□ 0.16
BEST1-208ENST00000534553 HCLS1P14317 486 aaPredicted RBP16.03■□□□□ 0.16
BEST1-208ENST00000534553 ZNF589Q86UQ0 364 aaPredicted RBP16.03■□□□□ 0.16
BEST1-208ENST00000534553 DDX60Q8IY21 1712 aaKnown RBP16.03■□□□□ 0.16
BEST1-208ENST00000534553 SEPT12Q8IYM1 358 aa16.03■□□□□ 0.16
BEST1-208ENST00000534553 BCL11BQ9C0K0 894 aaPredicted RBP16.03■□□□□ 0.16
BEST1-208ENST00000534553 SLC5A1P13866 664 aa16.03■□□□□ 0.16
BEST1-208ENST00000534553 SF3B3Q15393 1217 aaKnown RBP16.03■□□□□ 0.16
BEST1-208ENST00000534553 PDRG1Q9NUG6 133 aa16.03■□□□□ 0.16
BEST1-208ENST00000534553 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.03■□□□□ 0.16
BEST1-208ENST00000534553 ZPR1O75312 459 aa16.02■□□□□ 0.16
BEST1-208ENST00000534553 PDIA4P13667 645 aaKnown RBP16.02■□□□□ 0.16
BEST1-208ENST00000534553 FGFR2P21802 821 aa16.02■□□□□ 0.16
BEST1-208ENST00000534553 ARID4AP29374 1257 aaPredicted RBP16.02■□□□□ 0.16
BEST1-208ENST00000534553 ADORA1P30542 326 aa16.02■□□□□ 0.16
BEST1-208ENST00000534553 AK2P54819 239 aa16.02■□□□□ 0.16
BEST1-208ENST00000534553 FKBP4Q02790 459 aaKnown RBP eCLIP16.02■□□□□ 0.16
BEST1-208ENST00000534553 GSE1Q14687 1217 aa16.02■□□□□ 0.16
BEST1-208ENST00000534553 SLC10A5Q5PT55 438 aa16.02■□□□□ 0.16
BEST1-208ENST00000534553 ARAP2Q8WZ64 1704 aa16.02■□□□□ 0.15
BEST1-208ENST00000534553 HMGB1P09429 215 aaKnown RBP16.01■□□□□ 0.15
BEST1-208ENST00000534553 SKOR2Q2VWA4 1001 aaPredicted RBP16.01■□□□□ 0.15
BEST1-208ENST00000534553 BLOC1S2Q6QNY1 142 aa16.01■□□□□ 0.15
BEST1-208ENST00000534553 GNPATO15228 680 aa16.01■□□□□ 0.15
BEST1-208ENST00000534553 ADRA2BP18089 450 aa16.01■□□□□ 0.15
BEST1-208ENST00000534553 NDUFB9Q9Y6M9 179 aa16.01■□□□□ 0.15
BEST1-208ENST00000534553 SBF2Q86WG5 1849 aa16■□□□□ 0.15
BEST1-208ENST00000534553 ZGPATQ8N5A5 531 aaKnown RBP16■□□□□ 0.15
BEST1-208ENST00000534553 SETDB2Q96T68 719 aa16■□□□□ 0.15
BEST1-208ENST00000534553 COL24A1Q17RW2 1714 aa15.99■□□□□ 0.15
BEST1-208ENST00000534553 FAM177BA6PVY3 158 aa15.99■□□□□ 0.15
BEST1-208ENST00000534553 GTF2E1P29083 439 aaPredicted RBP15.99■□□□□ 0.15
BEST1-208ENST00000534553 DEKP35659 375 aaKnown RBP15.99■□□□□ 0.15
BEST1-208ENST00000534553 ADCK5Q3MIX3 580 aa15.99■□□□□ 0.15
BEST1-208ENST00000534553 CCDC102BQ68D86 513 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms