RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	IFIT5	Q13325	482 aa	Known RBP	18.3	■□□□□ 0.52
CTSB-231	ENST00000534382	GPC2	Q8N158	579 aa		18.3	■□□□□ 0.52
CTSB-231	ENST00000534382	KAZALD1	Q96I82	304 aa		18.3	■□□□□ 0.52
CTSB-231	ENST00000534382	L3MBTL3	Q96JM7	780 aa	Predicted RBP	18.3	■□□□□ 0.52
CTSB-231	ENST00000534382	EYA3	Q99504	573 aa		18.3	■□□□□ 0.52
CTSB-231	ENST00000534382	GGA1	Q9UJY5	639 aa		18.3	■□□□□ 0.52
CTSB-231	ENST00000534382	ZNRF3	Q9ULT6	936 aa		18.3	■□□□□ 0.52
CTSB-231	ENST00000534382	XDH	P47989	1333 aa		18.29	■□□□□ 0.52
CTSB-231	ENST00000534382	UFL1	O94874	794 aa		18.29	■□□□□ 0.52
CTSB-231	ENST00000534382	CCDC57	Q2TAC2	916 aa		18.29	■□□□□ 0.52
CTSB-231	ENST00000534382	MPHOSPH8	Q99549	860 aa		18.29	■□□□□ 0.52
CTSB-231	ENST00000534382	WDR90	Q96KV7	1748 aa		18.29	■□□□□ 0.52
CTSB-231	ENST00000534382	RIMBP2	O15034	1052 aa		18.28	■□□□□ 0.52
CTSB-231	ENST00000534382	ATP2B4	P23634	1241 aa		18.28	■□□□□ 0.52
CTSB-231	ENST00000534382	RBM46	Q8TBY0	533 aa	Known RBP	18.28	■□□□□ 0.52
CTSB-231	ENST00000534382	FRAT1	Q92837	279 aa	Predicted RBP	18.28	■□□□□ 0.52
CTSB-231	ENST00000534382	ZC3H12C	Q9C0D7	883 aa	Known RBP	18.28	■□□□□ 0.52
CTSB-231	ENST00000534382	IQCA1L	A6NCM1	817 aa		18.27	■□□□□ 0.52
CTSB-231	ENST00000534382	GPR101	Q96P66	508 aa	Predicted RBP	18.27	■□□□□ 0.52
CTSB-231	ENST00000534382	BICC1	Q9H694	974 aa	Known RBP	18.27	■□□□□ 0.52
CTSB-231	ENST00000534382	GJA3	Q9Y6H8	435 aa		18.27	■□□□□ 0.52
CTSB-231	ENST00000534382	LTBP1	Q14766	1721 aa		18.26	■□□□□ 0.51
CTSB-231	ENST00000534382	CXCL9	Q07325	125 aa		18.26	■□□□□ 0.51
CTSB-231	ENST00000534382	RABL6	Q3YEC7	729 aa	Predicted RBP	18.26	■□□□□ 0.51
CTSB-231	ENST00000534382	ATF7IP	Q6VMQ6	1270 aa		18.26	■□□□□ 0.51
CTSB-231	ENST00000534382	ANKRD2	Q9GZV1	360 aa		18.26	■□□□□ 0.51
CTSB-231	ENST00000534382	YDJC	A8MPS7	323 aa		18.25	■□□□□ 0.51
CTSB-231	ENST00000534382	TRIM27	P14373	513 aa		18.25	■□□□□ 0.51
CTSB-231	ENST00000534382	TAF7L	Q5H9L4	462 aa		18.25	■□□□□ 0.51
CTSB-231	ENST00000534382	INTS3	Q68E01	1043 aa	Known RBP	18.25	■□□□□ 0.51
CTSB-231	ENST00000534382	DBNDD1	Q9H9R9	158 aa		18.25	■□□□□ 0.51
CTSB-231	ENST00000534382	RAD17	O75943	681 aa		18.24	■□□□□ 0.51
CTSB-231	ENST00000534382	CHRND	Q07001	517 aa		18.24	■□□□□ 0.51
CTSB-231	ENST00000534382	TNIP1	Q15025	636 aa		18.24	■□□□□ 0.51
CTSB-231	ENST00000534382	DOK7	Q18PE1	504 aa		18.24	■□□□□ 0.51
CTSB-231	ENST00000534382	ZKSCAN2	Q63HK3	967 aa		18.24	■□□□□ 0.51
CTSB-231	ENST00000534382	CIAPIN1	Q6FI81	312 aa		18.24	■□□□□ 0.51
CTSB-231	ENST00000534382	LDHAL6A	Q6ZMR3	332 aa		18.24	■□□□□ 0.51
CTSB-231	ENST00000534382	ANKRD44	Q8N8A2	993 aa		18.24	■□□□□ 0.51
CTSB-231	ENST00000534382	ZNF594	Q96JF6	807 aa	Predicted RBP	18.24	■□□□□ 0.51
CTSB-231	ENST00000534382	TAF1D	Q9H5J8	278 aa	Predicted RBP	18.24	■□□□□ 0.51
CTSB-231	ENST00000534382	HACL1	Q9UJ83	578 aa		18.24	■□□□□ 0.51
CTSB-231	ENST00000534382	LEMD3	Q9Y2U8	911 aa		18.24	■□□□□ 0.51
CTSB-231	ENST00000534382	WTIP	A6NIX2	430 aa	Predicted RBP	18.23	■□□□□ 0.51
CTSB-231	ENST00000534382		G3V3G9	751 aa		18.23	■□□□□ 0.51
CTSB-231	ENST00000534382	ECE2	O60344	883 aa		18.23	■□□□□ 0.51
CTSB-231	ENST00000534382	UBTFL1	P0CB47	393 aa	Predicted RBP	18.23	■□□□□ 0.51
CTSB-231	ENST00000534382	FSTL1	Q12841	308 aa		18.23	■□□□□ 0.51
CTSB-231	ENST00000534382	DCAF8	Q5TAQ9	597 aa		18.23	■□□□□ 0.51
CTSB-231	ENST00000534382	HDAC5	Q9UQL6	1122 aa		18.23	■□□□□ 0.51
CTSB-231	ENST00000534382	SMC1B	Q8NDV3	1235 aa		18.22	■□□□□ 0.51
CTSB-231	ENST00000534382	TNN	Q9UQP3	1299 aa		18.22	■□□□□ 0.51
CTSB-231	ENST00000534382	SPEF2	Q9C093	1822 aa		18.21	■□□□□ 0.51
CTSB-231	ENST00000534382	LMOD1	P29536	600 aa	Predicted RBP	18.21	■□□□□ 0.51
CTSB-231	ENST00000534382	EPHX2	P34913	555 aa		18.21	■□□□□ 0.51
CTSB-231	ENST00000534382	SCNN1D	P51172	638 aa		18.21	■□□□□ 0.51
CTSB-231	ENST00000534382	CLUAP1	Q96AJ1	413 aa		18.21	■□□□□ 0.51
CTSB-231	ENST00000534382	CNNM1	Q9NRU3	951 aa		18.21	■□□□□ 0.51
CTSB-231	ENST00000534382	SCN4A	P35499	1836 aa		18.21	■□□□□ 0.51
CTSB-231	ENST00000534382	ZNF804B	A4D1E1	1349 aa		18.21	■□□□□ 0.51
CTSB-231	ENST00000534382	MED23	Q9ULK4	1368 aa		18.2	■□□□□ 0.5
CTSB-231	ENST00000534382	KCNJ4	P48050	445 aa		18.2	■□□□□ 0.5
CTSB-231	ENST00000534382	HELB	Q8NG08	1087 aa	Predicted RBP	18.2	■□□□□ 0.5
CTSB-231	ENST00000534382	MEIS3	Q99687	375 aa		18.2	■□□□□ 0.5
CTSB-231	ENST00000534382	KCNQ5	Q9NR82	932 aa		18.2	■□□□□ 0.5
CTSB-231	ENST00000534382	PSMD14	O00487	310 aa		18.19	■□□□□ 0.5
CTSB-231	ENST00000534382	TAF5L	O75529	589 aa		18.19	■□□□□ 0.5
CTSB-231	ENST00000534382	GNAI3	P08754	354 aa		18.19	■□□□□ 0.5
CTSB-231	ENST00000534382	POTEI	P0CG38	1075 aa		18.19	■□□□□ 0.5
CTSB-231	ENST00000534382	POTEJ	P0CG39	1038 aa		18.19	■□□□□ 0.5
CTSB-231	ENST00000534382	EPS15	P42566	896 aa		18.19	■□□□□ 0.5
CTSB-231	ENST00000534382	GMPS	P49915	693 aa	Predicted RBP	18.19	■□□□□ 0.5
CTSB-231	ENST00000534382	PNMA8A	Q86V59	439 aa	Predicted RBP	18.19	■□□□□ 0.5
CTSB-231	ENST00000534382	PUS3	Q9BZE2	481 aa	Known RBP	18.19	■□□□□ 0.5
CTSB-231	ENST00000534382	GPRC5D	Q9NZD1	345 aa		18.19	■□□□□ 0.5
CTSB-231	ENST00000534382	HSPA6	P17066	643 aa		18.18	■□□□□ 0.5
CTSB-231	ENST00000534382	EAPP	Q56P03	285 aa	Predicted RBP	18.18	■□□□□ 0.5
CTSB-231	ENST00000534382	PODN	Q7Z5L7	613 aa		18.18	■□□□□ 0.5
CTSB-231	ENST00000534382	TXNRD3	Q86VQ6	643 aa		18.18	■□□□□ 0.5
CTSB-231	ENST00000534382	LDHD	Q86WU2	507 aa		18.18	■□□□□ 0.5
CTSB-231	ENST00000534382	RIPOR2	Q9Y4F9	1068 aa		18.18	■□□□□ 0.5
CTSB-231	ENST00000534382	LRRFIP2	Q9Y608	721 aa	Known RBP	18.18	■□□□□ 0.5
CTSB-231	ENST00000534382	SNAP23	O00161	211 aa		18.17	■□□□□ 0.5
CTSB-231	ENST00000534382	PLIN1	O60240	522 aa		18.17	■□□□□ 0.5
CTSB-231	ENST00000534382	VIL1	P09327	827 aa	Known RBP	18.17	■□□□□ 0.5
CTSB-231	ENST00000534382	CHADL	Q6NUI6	762 aa		18.17	■□□□□ 0.5
CTSB-231	ENST00000534382	TMEM57	Q8N5G2	664 aa		18.17	■□□□□ 0.5
CTSB-231	ENST00000534382	DPF2	Q92785	391 aa		18.17	■□□□□ 0.5
CTSB-231	ENST00000534382	COA1	Q9GZY4	146 aa		18.17	■□□□□ 0.5
CTSB-231	ENST00000534382	KLRK1	P26718	216 aa		18.16	■□□□□ 0.5
CTSB-231	ENST00000534382	RFX5	P48382	616 aa	Predicted RBP	18.16	■□□□□ 0.5
CTSB-231	ENST00000534382	C15orf52	Q6ZUT6	534 aa	Known RBP	18.16	■□□□□ 0.5
CTSB-231	ENST00000534382	FTSJ3	Q8IY81	847 aa	Known RBP	18.16	■□□□□ 0.5
CTSB-231	ENST00000534382	DZIP1L	Q8IYY4	767 aa	Known RBP	18.16	■□□□□ 0.5
CTSB-231	ENST00000534382	ADARB2	Q9NS39	739 aa	Known RBP	18.16	■□□□□ 0.5
CTSB-231	ENST00000534382	ZBTB12	Q9Y330	459 aa	Predicted RBP	18.16	■□□□□ 0.5
CTSB-231	ENST00000534382	MROH5	Q6ZUA9	1318 aa		18.16	■□□□□ 0.5
CTSB-231	ENST00000534382	RPS12	P25398	132 aa	Known RBP	18.15	■□□□□ 0.5
CTSB-231	ENST00000534382	LRRC24	Q50LG9	513 aa		18.15	■□□□□ 0.5
CTSB-231	ENST00000534382	USP50	Q70EL3	339 aa	Predicted RBP	18.15	■□□□□ 0.5

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