RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 TRPM7Q96QT4 1865 aa22.33■■□□□ 1.17
VPS51-213ENST00000533827 SHTN1A0MZ66 631 aa22.33■■□□□ 1.17
VPS51-213ENST00000533827 TRAF5O00463 557 aa22.33■■□□□ 1.17
VPS51-213ENST00000533827 FLIIQ13045 1269 aa22.33■■□□□ 1.17
VPS51-213ENST00000533827 DOK7Q18PE1 504 aa22.33■■□□□ 1.17
VPS51-213ENST00000533827 ANKRD18AQ8IVF6 992 aa22.33■■□□□ 1.17
VPS51-213ENST00000533827 TTLL11Q8NHH1 800 aa22.33■■□□□ 1.17
VPS51-213ENST00000533827 KCNQ5Q9NR82 932 aa22.33■■□□□ 1.17
VPS51-213ENST00000533827 ZBTB12Q9Y330 459 aaPredicted RBP22.33■■□□□ 1.17
VPS51-213ENST00000533827 MYH3P11055 1940 aa22.32■■□□□ 1.16
VPS51-213ENST00000533827 H7C1W4 665 aa22.32■■□□□ 1.16
VPS51-213ENST00000533827 EXOSC9Q06265 439 aaKnown RBP22.32■■□□□ 1.16
VPS51-213ENST00000533827 CST9Q5W186 159 aa22.32■■□□□ 1.16
VPS51-213ENST00000533827 TRPM4Q8TD43 1214 aa22.32■■□□□ 1.16
VPS51-213ENST00000533827 ZC3H15Q8WU90 426 aaKnown RBP22.32■■□□□ 1.16
VPS51-213ENST00000533827 ZC3H12CQ9C0D7 883 aaKnown RBP22.32■■□□□ 1.16
VPS51-213ENST00000533827 ANKIB1Q9P2G1 1089 aa22.32■■□□□ 1.16
VPS51-213ENST00000533827 GGA1Q9UJY5 639 aa22.32■■□□□ 1.16
VPS51-213ENST00000533827 RTL9Q8NET4 1388 aa22.32■■□□□ 1.16
VPS51-213ENST00000533827 CACNA1FO60840 1977 aa22.32■■□□□ 1.16
VPS51-213ENST00000533827 H7C1D1 291 aa22.31■■□□□ 1.16
VPS51-213ENST00000533827 UFL1O94874 794 aa22.31■■□□□ 1.16
VPS51-213ENST00000533827 MICALL2Q8IY33 904 aa22.31■■□□□ 1.16
VPS51-213ENST00000533827 SPINK5Q9NQ38 1064 aaPredicted RBP22.31■■□□□ 1.16
VPS51-213ENST00000533827 ABT1Q9ULW3 272 aaKnown RBP22.31■■□□□ 1.16
VPS51-213ENST00000533827 GCKRQ14397 625 aa22.3■■□□□ 1.16
VPS51-213ENST00000533827 FAM9BQ8IZU0 186 aa22.3■■□□□ 1.16
VPS51-213ENST00000533827 CDC5LQ99459 802 aaKnown RBP22.3■■□□□ 1.16
VPS51-213ENST00000533827 XDHP47989 1333 aa22.3■■□□□ 1.16
VPS51-213ENST00000533827 SCN9AQ15858 1988 aa22.29■■□□□ 1.16
VPS51-213ENST00000533827 RPS12P25398 132 aaKnown RBP22.29■■□□□ 1.16
VPS51-213ENST00000533827 FKBP5Q13451 457 aaPredicted RBP22.29■■□□□ 1.16
VPS51-213ENST00000533827 DNAAF4Q8WXU2 420 aa22.29■■□□□ 1.16
VPS51-213ENST00000533827 GLIS2Q9BZE0 524 aaPredicted RBP22.29■■□□□ 1.16
VPS51-213ENST00000533827 GREM2Q9H772 168 aa22.29■■□□□ 1.16
VPS51-213ENST00000533827 UBE3BQ7Z3V4 1068 aa22.28■■□□□ 1.16
VPS51-213ENST00000533827 PLA2G12BQ9BX93 195 aa22.28■■□□□ 1.16
VPS51-213ENST00000533827 BSDC1Q9NW68 430 aaPredicted RBP22.28■■□□□ 1.16
VPS51-213ENST00000533827 WDR33Q9C0J8 1336 aaKnown RBP22.28■■□□□ 1.16
VPS51-213ENST00000533827 VIL1P09327 827 aaKnown RBP22.27■■□□□ 1.16
VPS51-213ENST00000533827 CASP7P55210 303 aa22.27■■□□□ 1.16
VPS51-213ENST00000533827 SAMD7Q7Z3H4 446 aa22.27■■□□□ 1.16
VPS51-213ENST00000533827 LINS1Q8NG48 757 aa22.27■■□□□ 1.16
VPS51-213ENST00000533827 TLL2Q9Y6L7 1015 aa22.27■■□□□ 1.16
VPS51-213ENST00000533827 SPEF2Q9C093 1822 aa22.27■■□□□ 1.15
VPS51-213ENST00000533827 FOXN1O15353 648 aa22.26■■□□□ 1.15
VPS51-213ENST00000533827 ATP2B4P23634 1241 aa22.26■■□□□ 1.15
VPS51-213ENST00000533827 CDC37L1Q7L3B6 337 aa22.26■■□□□ 1.15
VPS51-213ENST00000533827 MYH16Q9H6N6 1097 aa22.26■■□□□ 1.15
VPS51-213ENST00000533827 WBP1LQ9NX94 342 aa22.26■■□□□ 1.15
VPS51-213ENST00000533827 MINPP1Q9UNW1 487 aa22.26■■□□□ 1.15
VPS51-213ENST00000533827 PSME4Q14997 1843 aa22.25■■□□□ 1.15
VPS51-213ENST00000533827 G3V3G9 751 aa22.25■■□□□ 1.15
VPS51-213ENST00000533827 EGFRP00533 1210 aa22.25■■□□□ 1.15
VPS51-213ENST00000533827 DCAF8Q5TAQ9 597 aa22.25■■□□□ 1.15
VPS51-213ENST00000533827 THSD7BQ9C0I4 1608 aa22.24■■□□□ 1.15
VPS51-213ENST00000533827 ZNF609O15014 1411 aa22.24■■□□□ 1.15
VPS51-213ENST00000533827 WTIPA6NIX2 430 aaPredicted RBP22.24■■□□□ 1.15
VPS51-213ENST00000533827 CELF2O95319 508 aaKnown RBP22.24■■□□□ 1.15
VPS51-213ENST00000533827 CSF1RP07333 972 aa22.24■■□□□ 1.15
VPS51-213ENST00000533827 TBC1D10BQ4KMP7 808 aaPredicted RBP22.24■■□□□ 1.15
VPS51-213ENST00000533827 TNS4Q8IZW8 715 aa22.24■■□□□ 1.15
VPS51-213ENST00000533827 CAPNS2Q96L46 248 aa22.23■■□□□ 1.15
VPS51-213ENST00000533827 ECE1P42892 770 aa22.22■■□□□ 1.15
VPS51-213ENST00000533827 CYP4F22Q6NT55 531 aa22.22■■□□□ 1.15
VPS51-213ENST00000533827 PODNQ7Z5L7 613 aa22.22■■□□□ 1.15
VPS51-213ENST00000533827 SAPCD2Q86UD0 394 aa22.22■■□□□ 1.15
VPS51-213ENST00000533827 AIDAQ96BJ3 306 aa22.22■■□□□ 1.15
VPS51-213ENST00000533827 MED23Q9ULK4 1368 aa22.22■■□□□ 1.15
VPS51-213ENST00000533827 F6X3S4 739 aa22.21■■□□□ 1.15
VPS51-213ENST00000533827 ITGA6P23229 1130 aa22.21■■□□□ 1.15
VPS51-213ENST00000533827 IGHMBP2P38935 993 aaKnown RBP22.21■■□□□ 1.15
VPS51-213ENST00000533827 CCT4P50991 539 aaKnown RBP22.21■■□□□ 1.15
VPS51-213ENST00000533827 FAM161AQ3B820 660 aa22.21■■□□□ 1.15
VPS51-213ENST00000533827 BEND3Q5T5X7 828 aa22.21■■□□□ 1.15
VPS51-213ENST00000533827 RBM26Q5T8P6 1007 aaKnown RBP22.21■■□□□ 1.15
VPS51-213ENST00000533827 RSBN1LQ6PCB5 846 aaPredicted RBP22.21■■□□□ 1.15
VPS51-213ENST00000533827 USP48Q86UV5 1035 aa22.21■■□□□ 1.15
VPS51-213ENST00000533827 AGBL3Q8NEM8 1001 aa22.21■■□□□ 1.15
VPS51-213ENST00000533827 ZNF521Q96K83 1311 aa22.21■■□□□ 1.15
VPS51-213ENST00000533827 CTCFP49711 727 aaPredicted RBP22.2■■□□□ 1.14
VPS51-213ENST00000533827 MAP2K1Q02750 393 aaPredicted RBP22.2■■□□□ 1.14
VPS51-213ENST00000533827 PAXIP1Q6ZW49 1069 aaPredicted RBP22.2■■□□□ 1.14
VPS51-213ENST00000533827 PRDM10Q9NQV6 1147 aa22.2■■□□□ 1.14
VPS51-213ENST00000533827 ZNF280AP59817 542 aaPredicted RBP22.19■■□□□ 1.14
VPS51-213ENST00000533827 KIF4BQ2VIQ3 1234 aa22.19■■□□□ 1.14
VPS51-213ENST00000533827 DLK2Q6UY11 383 aa22.19■■□□□ 1.14
VPS51-213ENST00000533827 HHIPL1Q96JK4 782 aa22.19■■□□□ 1.14
VPS51-213ENST00000533827 GMLQ99445 158 aa22.19■■□□□ 1.14
VPS51-213ENST00000533827 ZNF408Q9H9D4 720 aa22.19■■□□□ 1.14
VPS51-213ENST00000533827 USP17L3A6NCW0 530 aa22.18■■□□□ 1.14
VPS51-213ENST00000533827 USP17L4A6NCW7 530 aa22.18■■□□□ 1.14
VPS51-213ENST00000533827 USP17L1Q7RTZ2 530 aa22.18■■□□□ 1.14
VPS51-213ENST00000533827 KRT26Q7Z3Y9 468 aa22.18■■□□□ 1.14
VPS51-213ENST00000533827 LEMD3Q9Y2U8 911 aa22.18■■□□□ 1.14
VPS51-213ENST00000533827 POLR2AP24928 1970 aaKnown RBP22.18■■□□□ 1.14
VPS51-213ENST00000533827 FOXO4P98177 505 aa22.17■■□□□ 1.14
VPS51-213ENST00000533827 GRM1Q13255 1194 aa22.17■■□□□ 1.14
VPS51-213ENST00000533827 DCPSQ96C86 337 aaKnown RBP22.17■■□□□ 1.14
VPS51-213ENST00000533827 MPHOSPH8Q99549 860 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms