RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 TBC1D8O95759 1140 aa16.3■□□□□ 0.2
SVIP-205ENST00000533774 PPP2R1AP30153 589 aa16.3■□□□□ 0.2
SVIP-205ENST00000533774 WASHC4Q2M389 1173 aa16.3■□□□□ 0.2
SVIP-205ENST00000533774 KIF4BQ2VIQ3 1234 aa16.3■□□□□ 0.2
SVIP-205ENST00000533774 MOB2Q70IA6 237 aa16.3■□□□□ 0.2
SVIP-205ENST00000533774 PNISRQ8TF01 805 aaKnown RBP16.3■□□□□ 0.2
SVIP-205ENST00000533774 HTTP42858 3142 aa16.3■□□□□ 0.2
SVIP-205ENST00000533774 KIAA0100Q14667 2235 aaKnown RBP16.3■□□□□ 0.2
SVIP-205ENST00000533774 RPS12P25398 132 aaKnown RBP16.29■□□□□ 0.2
SVIP-205ENST00000533774 GPSM2P81274 684 aa16.29■□□□□ 0.2
SVIP-205ENST00000533774 HABP4Q5JVS0 413 aaKnown RBP16.29■□□□□ 0.2
SVIP-205ENST00000533774 CELF1Q92879 486 aaKnown RBP16.29■□□□□ 0.2
SVIP-205ENST00000533774 EIF2S2P20042 333 aaKnown RBP16.28■□□□□ 0.2
SVIP-205ENST00000533774 SULF1Q8IWU6 871 aa16.28■□□□□ 0.2
SVIP-205ENST00000533774 TRMT112Q9UI30 125 aaKnown RBP16.28■□□□□ 0.2
SVIP-205ENST00000533774 NSFL1CQ9UNZ2 370 aaKnown RBP16.28■□□□□ 0.2
SVIP-205ENST00000533774 SCAF8Q9UPN6 1271 aaKnown RBP16.28■□□□□ 0.2
SVIP-205ENST00000533774 ZNF646O15015 1829 aaPredicted RBP16.28■□□□□ 0.2
SVIP-205ENST00000533774 VIL1P09327 827 aaKnown RBP16.27■□□□□ 0.2
SVIP-205ENST00000533774 PKN2Q16513 984 aaKnown RBP16.27■□□□□ 0.2
SVIP-205ENST00000533774 R3HDMLQ9H3Y0 253 aa16.27■□□□□ 0.2
SVIP-205ENST00000533774 HDAC9Q9UKV0 1011 aa16.27■□□□□ 0.2
SVIP-205ENST00000533774 CENPFP49454 3210 aa16.26■□□□□ 0.19
SVIP-205ENST00000533774 RBBP6Q7Z6E9 1792 aaKnown RBP16.26■□□□□ 0.19
SVIP-205ENST00000533774 SH3TC1Q8TE82 1336 aa16.26■□□□□ 0.19
SVIP-205ENST00000533774 C6orf229H3BNL8 230 aa16.26■□□□□ 0.19
SVIP-205ENST00000533774 TCIRG1Q13488 830 aa16.26■□□□□ 0.19
SVIP-205ENST00000533774 ANGEL2Q5VTE6 544 aaKnown RBP16.26■□□□□ 0.19
SVIP-205ENST00000533774 COPS6Q7L5N1 327 aa16.26■□□□□ 0.19
SVIP-205ENST00000533774 TMC4Q7Z404 712 aa16.26■□□□□ 0.19
SVIP-205ENST00000533774 PLEKHF1Q96S99 279 aa16.26■□□□□ 0.19
SVIP-205ENST00000533774 AIMP1Q12904 312 aaKnown RBP16.25■□□□□ 0.19
SVIP-205ENST00000533774 SCARF1Q14162 830 aa16.25■□□□□ 0.19
SVIP-205ENST00000533774 REM2Q8IYK8 340 aaPredicted RBP16.25■□□□□ 0.19
SVIP-205ENST00000533774 XAGE3Q8WTP9 111 aa16.25■□□□□ 0.19
SVIP-205ENST00000533774 UBE2Q2LH0YL09 131 aa16.24■□□□□ 0.19
SVIP-205ENST00000533774 GPR25O00155 361 aa16.24■□□□□ 0.19
SVIP-205ENST00000533774 ZNF280AP59817 542 aaPredicted RBP16.24■□□□□ 0.19
SVIP-205ENST00000533774 PRAMEF18Q5VWM3 479 aa16.24■□□□□ 0.19
SVIP-205ENST00000533774 FBXO46Q6PJ61 603 aaPredicted RBP16.24■□□□□ 0.19
SVIP-205ENST00000533774 TBC1D16Q8TBP0 767 aa16.24■□□□□ 0.19
SVIP-205ENST00000533774 NECTIN2Q92692 538 aa16.24■□□□□ 0.19
SVIP-205ENST00000533774 GCC1Q96CN9 775 aa16.24■□□□□ 0.19
SVIP-205ENST00000533774 NFE2L2Q16236 605 aa16.23■□□□□ 0.19
SVIP-205ENST00000533774 POTEFA5A3E0 1075 aa16.22■□□□□ 0.19
SVIP-205ENST00000533774 TM4SF4P48230 202 aa16.22■□□□□ 0.19
SVIP-205ENST00000533774 FKBP1BP68106 108 aa16.22■□□□□ 0.19
SVIP-205ENST00000533774 SF3B3Q15393 1217 aaKnown RBP16.22■□□□□ 0.19
SVIP-205ENST00000533774 HSP90AB3PQ58FF7 597 aa16.22■□□□□ 0.19
SVIP-205ENST00000533774 GMLQ99445 158 aa16.22■□□□□ 0.19
SVIP-205ENST00000533774 BRCA2P51587 3418 aa16.22■□□□□ 0.19
SVIP-205ENST00000533774 ZNF609O15014 1411 aa16.21■□□□□ 0.19
SVIP-205ENST00000533774 MKRN3Q13064 507 aaKnown RBP16.21■□□□□ 0.19
SVIP-205ENST00000533774 NOM1Q5C9Z4 860 aaKnown RBP16.21■□□□□ 0.19
SVIP-205ENST00000533774 FAM89AQ96GI7 184 aa16.21■□□□□ 0.19
SVIP-205ENST00000533774 TSPYL4Q9UJ04 414 aa16.21■□□□□ 0.19
SVIP-205ENST00000533774 FXR1P51114 621 aaKnown RBP eCLIP16.2■□□□□ 0.18
SVIP-205ENST00000533774 EYA3Q99504 573 aa16.2■□□□□ 0.18
SVIP-205ENST00000533774 LAMB1P07942 1786 aa16.2■□□□□ 0.18
SVIP-205ENST00000533774 KRT24Q2M2I5 525 aa16.19■□□□□ 0.18
SVIP-205ENST00000533774 RTL5Q5HYW3 569 aaPredicted RBP16.19■□□□□ 0.18
SVIP-205ENST00000533774 RSBN1LQ6PCB5 846 aaPredicted RBP16.19■□□□□ 0.18
SVIP-205ENST00000533774 SPEF2Q9C093 1822 aa16.19■□□□□ 0.18
SVIP-205ENST00000533774 PITPNM2Q9BZ72 1349 aa16.19■□□□□ 0.18
SVIP-205ENST00000533774 CEP290O15078 2479 aa16.18■□□□□ 0.18
SVIP-205ENST00000533774 FKTNO75072 461 aa16.18■□□□□ 0.18
SVIP-205ENST00000533774 RPS8P62241 208 aaKnown RBP16.18■□□□□ 0.18
SVIP-205ENST00000533774 AGBL3Q8NEM8 1001 aa16.18■□□□□ 0.18
SVIP-205ENST00000533774 ISCA1Q9BUE6 129 aa16.18■□□□□ 0.18
SVIP-205ENST00000533774 ZC3H12CQ9C0D7 883 aaKnown RBP16.18■□□□□ 0.18
SVIP-205ENST00000533774 MYOZ2Q9NPC6 264 aa16.18■□□□□ 0.18
SVIP-205ENST00000533774 SEC31BQ9NQW1 1179 aa16.18■□□□□ 0.18
SVIP-205ENST00000533774 PODXL2Q9NZ53 605 aa16.18■□□□□ 0.18
SVIP-205ENST00000533774 ATP5J2-PTCD1G3V325 749 aa16.17■□□□□ 0.18
SVIP-205ENST00000533774 NBPF9Q3BBW0 867 aa16.17■□□□□ 0.18
SVIP-205ENST00000533774 CFHR5Q9BXR6 569 aa16.17■□□□□ 0.18
SVIP-205ENST00000533774 TRIOBPQ9H2D6 2365 aa16.17■□□□□ 0.18
SVIP-205ENST00000533774 WTIPA6NIX2 430 aaPredicted RBP16.16■□□□□ 0.18
SVIP-205ENST00000533774 UFL1O94874 794 aa16.16■□□□□ 0.18
SVIP-205ENST00000533774 PTPN12Q05209 780 aaKnown RBP16.16■□□□□ 0.18
SVIP-205ENST00000533774 SZT2Q5T011 3432 aa16.16■□□□□ 0.18
SVIP-205ENST00000533774 USP17L8P0C7I0 530 aa16.15■□□□□ 0.18
SVIP-205ENST00000533774 MXD3Q9BW11 206 aa16.15■□□□□ 0.18
SVIP-205ENST00000533774 NEFMP07197 916 aa16.14■□□□□ 0.17
SVIP-205ENST00000533774 TTLL12Q14166 644 aaPredicted RBP16.14■□□□□ 0.17
SVIP-205ENST00000533774 OTOP1Q7RTM1 612 aa16.14■□□□□ 0.17
SVIP-205ENST00000533774 CHPF2Q9P2E5 772 aa16.14■□□□□ 0.17
SVIP-205ENST00000533774 IRS4O14654 1257 aaPredicted RBP16.13■□□□□ 0.17
SVIP-205ENST00000533774 CAP1Q01518 475 aa16.13■□□□□ 0.17
SVIP-205ENST00000533774 PLBD2Q8NHP8 589 aa16.13■□□□□ 0.17
SVIP-205ENST00000533774 ANKIB1Q9P2G1 1089 aa16.13■□□□□ 0.17
SVIP-205ENST00000533774 GGA1Q9UJY5 639 aa16.13■□□□□ 0.17
SVIP-205ENST00000533774 FZD1Q9UP38 647 aa16.13■□□□□ 0.17
SVIP-205ENST00000533774 TRIM17Q9Y577 477 aa16.13■□□□□ 0.17
SVIP-205ENST00000533774 G3V3G9 751 aa16.12■□□□□ 0.17
SVIP-205ENST00000533774 EN2P19622 333 aaPredicted RBP16.12■□□□□ 0.17
SVIP-205ENST00000533774 PRKG1Q13976 671 aa16.12■□□□□ 0.17
SVIP-205ENST00000533774 POLA2Q14181 598 aa16.12■□□□□ 0.17
SVIP-205ENST00000533774 DCAF8Q5TAQ9 597 aa16.12■□□□□ 0.17
SVIP-205ENST00000533774 ANKRD13DQ6ZTN6 518 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms