RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 MYD88Q99836 296 aa13.64□□□□□ -0.23
CCDC90B-218ENST00000533761 VPS9D1Q9Y2B5 631 aa13.64□□□□□ -0.23
CCDC90B-218ENST00000533761 KDM2BQ8NHM5 1336 aa13.64□□□□□ -0.23
CCDC90B-218ENST00000533761 ATP5J2-PTCD1G3V325 749 aa13.63□□□□□ -0.23
CCDC90B-218ENST00000533761 MMP10P09238 476 aa13.63□□□□□ -0.23
CCDC90B-218ENST00000533761 GPTP24298 496 aa13.63□□□□□ -0.23
CCDC90B-218ENST00000533761 POLD1P28340 1107 aa13.63□□□□□ -0.23
CCDC90B-218ENST00000533761 THSD4Q6ZMP0 1018 aa13.63□□□□□ -0.23
CCDC90B-218ENST00000533761 PTCD2Q8WV60 388 aaKnown RBP13.63□□□□□ -0.23
CCDC90B-218ENST00000533761 SPON1Q9HCB6 807 aa13.63□□□□□ -0.23
CCDC90B-218ENST00000533761 C9orf78Q9NZ63 289 aaPredicted RBP13.63□□□□□ -0.23
CCDC90B-218ENST00000533761 ARFGEF2Q9Y6D5 1785 aa13.63□□□□□ -0.23
CCDC90B-218ENST00000533761 PPP1R42Q7Z4L9 355 aa13.62□□□□□ -0.23
CCDC90B-218ENST00000533761 CCDC191Q8NCU4 936 aa13.62□□□□□ -0.23
CCDC90B-218ENST00000533761 CARMIL3Q8ND23 1372 aa13.62□□□□□ -0.23
CCDC90B-218ENST00000533761 GCC1Q96CN9 775 aa13.62□□□□□ -0.23
CCDC90B-218ENST00000533761 KCNK17Q96T54 332 aa13.62□□□□□ -0.23
CCDC90B-218ENST00000533761 ISCA1Q9BUE6 129 aa13.62□□□□□ -0.23
CCDC90B-218ENST00000533761 PCDHB15Q9Y5E8 787 aa13.62□□□□□ -0.23
CCDC90B-218ENST00000533761 PARP3Q9Y6F1 533 aa13.62□□□□□ -0.23
CCDC90B-218ENST00000533761 NPHP1O15259 732 aa13.62□□□□□ -0.23
CCDC90B-218ENST00000533761 TPTE2Q6XPS3 522 aa13.62□□□□□ -0.23
CCDC90B-218ENST00000533761 NLRP10Q86W26 655 aa13.62□□□□□ -0.23
CCDC90B-218ENST00000533761 NBPF5PQ86XG9 351 aaPredicted RBP13.62□□□□□ -0.23
CCDC90B-218ENST00000533761 MEIS3Q99687 375 aa13.62□□□□□ -0.23
CCDC90B-218ENST00000533761 NYXQ9GZU5 481 aa13.62□□□□□ -0.23
CCDC90B-218ENST00000533761 SERPINB2P05120 415 aa13.61□□□□□ -0.23
CCDC90B-218ENST00000533761 IGKV5-2P06315 115 aa13.61□□□□□ -0.23
CCDC90B-218ENST00000533761 GTF2E1P29083 439 aaPredicted RBP13.61□□□□□ -0.23
CCDC90B-218ENST00000533761 CWF19L2Q2TBE0 894 aaKnown RBP13.61□□□□□ -0.23
CCDC90B-218ENST00000533761 CWC25Q9NXE8 425 aaPredicted RBP13.61□□□□□ -0.23
CCDC90B-218ENST00000533761 ANKRD36CQ5JPF3 1778 aa13.6□□□□□ -0.23
CCDC90B-218ENST00000533761 UBN2Q6ZU65 1347 aa13.6□□□□□ -0.23
CCDC90B-218ENST00000533761 NEURL1BA8MQ27 555 aa13.6□□□□□ -0.23
CCDC90B-218ENST00000533761 GRM8O00222 908 aa13.6□□□□□ -0.23
CCDC90B-218ENST00000533761 POLRMTO00411 1230 aaKnown RBP13.6□□□□□ -0.23
CCDC90B-218ENST00000533761 DDR1Q08345 913 aa13.6□□□□□ -0.23
CCDC90B-218ENST00000533761 ANKRD44Q8N8A2 993 aa13.6□□□□□ -0.23
CCDC90B-218ENST00000533761 UTP14AQ9BVJ6 771 aaKnown RBP13.6□□□□□ -0.23
CCDC90B-218ENST00000533761 TRMT112Q9UI30 125 aaKnown RBP13.6□□□□□ -0.23
CCDC90B-218ENST00000533761 PRKCSHP14314 528 aaPredicted RBP13.59□□□□□ -0.23
CCDC90B-218ENST00000533761 GCKRQ14397 625 aa13.59□□□□□ -0.23
CCDC90B-218ENST00000533761 SUSD4Q5VX71 490 aa13.59□□□□□ -0.23
CCDC90B-218ENST00000533761 CNBD1Q8NA66 436 aa13.59□□□□□ -0.23
CCDC90B-218ENST00000533761 USP44Q9H0E7 712 aa13.59□□□□□ -0.23
CCDC90B-218ENST00000533761 FAM177BA6PVY3 158 aa13.58□□□□□ -0.23
CCDC90B-218ENST00000533761 ZBTB38Q8NAP3 1195 aaPredicted RBP13.58□□□□□ -0.23
CCDC90B-218ENST00000533761 C1orf115Q9H7X2 142 aa13.58□□□□□ -0.23
CCDC90B-218ENST00000533761 SH3TC1Q8TE82 1336 aa13.58□□□□□ -0.24
CCDC90B-218ENST00000533761 IGHDP01880 384 aa13.58□□□□□ -0.24
CCDC90B-218ENST00000533761 HSP90B1P14625 803 aaKnown RBP13.58□□□□□ -0.24
CCDC90B-218ENST00000533761 CEP85Q6P2H3 762 aa13.58□□□□□ -0.24
CCDC90B-218ENST00000533761 COL24A1Q17RW2 1714 aa13.57□□□□□ -0.24
CCDC90B-218ENST00000533761 UTYO14607 1347 aa13.57□□□□□ -0.24
CCDC90B-218ENST00000533761 NTSR2O95665 410 aa13.57□□□□□ -0.24
CCDC90B-218ENST00000533761 ST5P78524 1137 aa13.57□□□□□ -0.24
CCDC90B-218ENST00000533761 SMC5Q8IY18 1101 aa13.57□□□□□ -0.24
CCDC90B-218ENST00000533761 PCCAP05165 728 aaPredicted RBP13.56□□□□□ -0.24
CCDC90B-218ENST00000533761 PRR5LQ6MZQ0 368 aa13.56□□□□□ -0.24
CCDC90B-218ENST00000533761 FAM89AQ96GI7 184 aa13.56□□□□□ -0.24
CCDC90B-218ENST00000533761 LRRFIP2Q9Y608 721 aaKnown RBP13.56□□□□□ -0.24
CCDC90B-218ENST00000533761 AFDNP55196 1824 aaKnown RBP13.56□□□□□ -0.24
CCDC90B-218ENST00000533761 H7C1W4 665 aa13.55□□□□□ -0.24
CCDC90B-218ENST00000533761 HSP90AB4PQ58FF6 505 aa13.55□□□□□ -0.24
CCDC90B-218ENST00000533761 RTL5Q5HYW3 569 aaPredicted RBP13.55□□□□□ -0.24
CCDC90B-218ENST00000533761 UBE3BQ7Z3V4 1068 aa13.55□□□□□ -0.24
CCDC90B-218ENST00000533761 NUTM1Q86Y26 1132 aa13.55□□□□□ -0.24
CCDC90B-218ENST00000533761 NBPF7P0C2Y1 421 aaPredicted RBP13.54□□□□□ -0.24
CCDC90B-218ENST00000533761 ERFEQ4G0M1 354 aa13.54□□□□□ -0.24
CCDC90B-218ENST00000533761 SLC10A5Q5PT55 438 aa13.54□□□□□ -0.24
CCDC90B-218ENST00000533761 BRIP1Q9BX63 1249 aa13.54□□□□□ -0.24
CCDC90B-218ENST00000533761 SLC4A5Q9BY07 1137 aa13.54□□□□□ -0.24
CCDC90B-218ENST00000533761 IRS4O14654 1257 aaPredicted RBP13.54□□□□□ -0.24
CCDC90B-218ENST00000533761 PDE6BP35913 854 aa13.54□□□□□ -0.24
CCDC90B-218ENST00000533761 ATP8B2P98198 1209 aa13.54□□□□□ -0.24
CCDC90B-218ENST00000533761 DCTPP1Q9H773 170 aa13.54□□□□□ -0.24
CCDC90B-218ENST00000533761 PPP1R1BQ9UD71 204 aaPredicted RBP13.54□□□□□ -0.24
CCDC90B-218ENST00000533761 TAOK2Q9UL54 1235 aa13.54□□□□□ -0.24
CCDC90B-218ENST00000533761 STK24Q9Y6E0 443 aa13.54□□□□□ -0.24
CCDC90B-218ENST00000533761 CDHR2Q9BYE9 1310 aa13.53□□□□□ -0.24
CCDC90B-218ENST00000533761 NRXN2Q9P2S2 1712 aa13.53□□□□□ -0.24
CCDC90B-218ENST00000533761 SRGAP3O43295 1099 aa13.53□□□□□ -0.24
CCDC90B-218ENST00000533761 MTX1Q13505 466 aa13.53□□□□□ -0.24
CCDC90B-218ENST00000533761 SYNE4Q8N205 404 aa13.53□□□□□ -0.24
CCDC90B-218ENST00000533761 NLRP3Q96P20 1036 aa13.53□□□□□ -0.24
CCDC90B-218ENST00000533761 CD2APQ9Y5K6 639 aa13.53□□□□□ -0.24
CCDC90B-218ENST00000533761 GOLGA8CPA6NN73 597 aa13.52□□□□□ -0.25
CCDC90B-218ENST00000533761 CCDC24Q8N4L8 307 aa13.52□□□□□ -0.25
CCDC90B-218ENST00000533761 JARID2Q92833 1246 aaPredicted RBP13.52□□□□□ -0.25
CCDC90B-218ENST00000533761 PDZRN3Q9UPQ7 1066 aa13.52□□□□□ -0.25
CCDC90B-218ENST00000533761 BHMG1C9JSJ3 638 aaPredicted RBP13.51□□□□□ -0.25
CCDC90B-218ENST00000533761 PDE8AO60658 829 aa13.51□□□□□ -0.25
CCDC90B-218ENST00000533761 HCLS1P14317 486 aaPredicted RBP13.51□□□□□ -0.25
CCDC90B-218ENST00000533761 CASP7P55210 303 aa13.51□□□□□ -0.25
CCDC90B-218ENST00000533761 NUCB1Q02818 461 aa13.51□□□□□ -0.25
CCDC90B-218ENST00000533761 SIRT2Q8IXJ6 389 aa13.51□□□□□ -0.25
CCDC90B-218ENST00000533761 SSH3Q8TE77 659 aa13.51□□□□□ -0.25
CCDC90B-218ENST00000533761 WNT2BQ93097 391 aa13.51□□□□□ -0.25
CCDC90B-218ENST00000533761 RIC1Q4ADV7 1423 aa13.51□□□□□ -0.25
CCDC90B-218ENST00000533761 RAB11FIP3O75154 756 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms