RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 C21orf2O43822 256 aa16.64■□□□□ 0.25
TRAPPC4-214ENST00000533632 LRRC24Q50LG9 513 aa16.64■□□□□ 0.25
TRAPPC4-214ENST00000533632 NOP58Q9Y2X3 529 aaKnown RBP16.64■□□□□ 0.25
TRAPPC4-214ENST00000533632 SURF6O75683 361 aaKnown RBP16.63■□□□□ 0.25
TRAPPC4-214ENST00000533632 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC4-214ENST00000533632 LTBP1Q14766 1721 aa16.63■□□□□ 0.25
TRAPPC4-214ENST00000533632 GRAPQ13588 217 aa16.62■□□□□ 0.25
TRAPPC4-214ENST00000533632 DDX46Q7L014 1031 aaKnown RBP16.62■□□□□ 0.25
TRAPPC4-214ENST00000533632 ATG9AQ7Z3C6 839 aa16.62■□□□□ 0.25
TRAPPC4-214ENST00000533632 SMC5Q8IY18 1101 aa16.62■□□□□ 0.25
TRAPPC4-214ENST00000533632 GRAPLQ8TC17 118 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC4-214ENST00000533632 TSHZ2Q9NRE2 1034 aa16.62■□□□□ 0.25
TRAPPC4-214ENST00000533632 ZNF219Q9P2Y4 722 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC4-214ENST00000533632 GRIN3BO60391 1043 aa16.61■□□□□ 0.25
TRAPPC4-214ENST00000533632 PRELPP51888 382 aa16.61■□□□□ 0.25
TRAPPC4-214ENST00000533632 NFKBIEO00221 500 aa16.61■□□□□ 0.25
TRAPPC4-214ENST00000533632 CDC5LQ99459 802 aaKnown RBP16.61■□□□□ 0.25
TRAPPC4-214ENST00000533632 DUOX1Q9NRD9 1551 aa16.6■□□□□ 0.25
TRAPPC4-214ENST00000533632 EYA2O00167 538 aa16.6■□□□□ 0.25
TRAPPC4-214ENST00000533632 APBB1O00213 710 aa16.6■□□□□ 0.25
TRAPPC4-214ENST00000533632 PPEF1O14829 653 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC4-214ENST00000533632 SASH1O94885 1247 aa16.6■□□□□ 0.25
TRAPPC4-214ENST00000533632 RPS8P62241 208 aaKnown RBP16.6■□□□□ 0.25
TRAPPC4-214ENST00000533632 TAF7LQ5H9L4 462 aa16.6■□□□□ 0.25
TRAPPC4-214ENST00000533632 ANKRD18AQ8IVF6 992 aa16.6■□□□□ 0.25
TRAPPC4-214ENST00000533632 RIPOR2Q9Y4F9 1068 aa16.6■□□□□ 0.25
TRAPPC4-214ENST00000533632 DICER1Q9UPY3 1922 aaKnown RBP16.6■□□□□ 0.25
TRAPPC4-214ENST00000533632 LDHAL6AQ6ZMR3 332 aa16.59■□□□□ 0.25
TRAPPC4-214ENST00000533632 BBOX1O75936 387 aa16.59■□□□□ 0.25
TRAPPC4-214ENST00000533632 CIAO1O76071 339 aa16.59■□□□□ 0.25
TRAPPC4-214ENST00000533632 IGHMBP2P38935 993 aaKnown RBP16.59■□□□□ 0.25
TRAPPC4-214ENST00000533632 RASSF7Q02833 373 aa16.59■□□□□ 0.25
TRAPPC4-214ENST00000533632 ARHGAP27Q6ZUM4 889 aa16.59■□□□□ 0.25
TRAPPC4-214ENST00000533632 GCC1Q96CN9 775 aa16.59■□□□□ 0.25
TRAPPC4-214ENST00000533632 ATP6V0A2Q9Y487 856 aa16.59■□□□□ 0.25
TRAPPC4-214ENST00000533632 SMARCA5O60264 1052 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC4-214ENST00000533632 MPHOSPH8Q99549 860 aa16.58■□□□□ 0.24
TRAPPC4-214ENST00000533632 BSDC1Q9NW68 430 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC4-214ENST00000533632 DCAF8L1A6NGE4 600 aa16.57■□□□□ 0.24
TRAPPC4-214ENST00000533632 G3BP1Q13283 466 aaKnown RBP eCLIP16.57■□□□□ 0.24
TRAPPC4-214ENST00000533632 SKAP1Q86WV1 359 aa16.57■□□□□ 0.24
TRAPPC4-214ENST00000533632 VGLL2Q8N8G2 317 aa16.57■□□□□ 0.24
TRAPPC4-214ENST00000533632 RHPN1Q8TCX5 695 aa16.57■□□□□ 0.24
TRAPPC4-214ENST00000533632 CNNM1Q9NRU3 951 aa16.57■□□□□ 0.24
TRAPPC4-214ENST00000533632 IL15P40933 162 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC4-214ENST00000533632 TFCP2Q12800 502 aa16.56■□□□□ 0.24
TRAPPC4-214ENST00000533632 OS9Q13438 667 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC4-214ENST00000533632 CCDC93Q567U6 631 aa16.56■□□□□ 0.24
TRAPPC4-214ENST00000533632 SP8Q8IXZ3 490 aa16.56■□□□□ 0.24
TRAPPC4-214ENST00000533632 FBXO3Q9UK99 471 aa16.56■□□□□ 0.24
TRAPPC4-214ENST00000533632 MINPP1Q9UNW1 487 aa16.56■□□□□ 0.24
TRAPPC4-214ENST00000533632 HELBQ8NG08 1087 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC4-214ENST00000533632 IL1RAPL2Q9NP60 686 aa16.56■□□□□ 0.24
TRAPPC4-214ENST00000533632 LTBP3Q9NS15 1303 aa16.55■□□□□ 0.24
TRAPPC4-214ENST00000533632 COL4A5P29400 1685 aa16.55■□□□□ 0.24
TRAPPC4-214ENST00000533632 WTIPA6NIX2 430 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC4-214ENST00000533632 RAB11FIP3O75154 756 aa16.55■□□□□ 0.24
TRAPPC4-214ENST00000533632 NUCB1Q02818 461 aa16.55■□□□□ 0.24
TRAPPC4-214ENST00000533632 CHRNDQ07001 517 aa16.55■□□□□ 0.24
TRAPPC4-214ENST00000533632 HSP90AB4PQ58FF6 505 aa16.55■□□□□ 0.24
TRAPPC4-214ENST00000533632 SOGA3Q5TF21 947 aa16.55■□□□□ 0.24
TRAPPC4-214ENST00000533632 ANKRD45Q5TZF3 282 aa16.55■□□□□ 0.24
TRAPPC4-214ENST00000533632 TIAM2Q8IVF5 1701 aa16.55■□□□□ 0.24
TRAPPC4-214ENST00000533632 SNAP23O00161 211 aa16.54■□□□□ 0.24
TRAPPC4-214ENST00000533632 TAF5LO75529 589 aa16.54■□□□□ 0.24
TRAPPC4-214ENST00000533632 CC2D2BQ6DHV5 1058 aa16.54■□□□□ 0.24
TRAPPC4-214ENST00000533632 TMC4Q7Z404 712 aa16.54■□□□□ 0.24
TRAPPC4-214ENST00000533632 KIF1BPQ96EK5 621 aa16.54■□□□□ 0.24
TRAPPC4-214ENST00000533632 LRRCC1Q9C099 1032 aa16.54■□□□□ 0.24
TRAPPC4-214ENST00000533632 ARAP2Q8WZ64 1704 aa16.54■□□□□ 0.24
TRAPPC4-214ENST00000533632 ZNF609O15014 1411 aa16.54■□□□□ 0.24
TRAPPC4-214ENST00000533632 METTL24Q5JXM2 366 aa16.54■□□□□ 0.24
TRAPPC4-214ENST00000533632 ERC1Q8IUD2 1116 aa16.54■□□□□ 0.24
TRAPPC4-214ENST00000533632 LNPKQ9C0E8 428 aa16.54■□□□□ 0.24
TRAPPC4-214ENST00000533632 BCL11AQ9H165 835 aa16.54■□□□□ 0.24
TRAPPC4-214ENST00000533632 MROH5Q6ZUA9 1318 aa16.53■□□□□ 0.24
TRAPPC4-214ENST00000533632 FKBP4Q02790 459 aaKnown RBP eCLIP16.53■□□□□ 0.24
TRAPPC4-214ENST00000533632 RTKN2Q8IZC4 609 aa16.53■□□□□ 0.24
TRAPPC4-214ENST00000533632 PSMD1Q99460 953 aa16.53■□□□□ 0.24
TRAPPC4-214ENST00000533632 TAOK3Q9H2K8 898 aa16.53■□□□□ 0.24
TRAPPC4-214ENST00000533632 PDE8BO95263 885 aa16.52■□□□□ 0.24
TRAPPC4-214ENST00000533632 GPSM2P81274 684 aa16.52■□□□□ 0.24
TRAPPC4-214ENST00000533632 CHD1LQ86WJ1 897 aa16.52■□□□□ 0.24
TRAPPC4-214ENST00000533632 C16orf71Q8IYS4 520 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC4-214ENST00000533632 OTUD7AQ8TE49 926 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC4-214ENST00000533632 EAF2Q96CJ1 260 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC4-214ENST00000533632 RTFDC1Q9BY42 306 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC4-214ENST00000533632 PDE4AP27815 886 aa16.51■□□□□ 0.23
TRAPPC4-214ENST00000533632 CEP126Q9P2H0 1117 aa16.51■□□□□ 0.23
TRAPPC4-214ENST00000533632 TNNI3KQ59H18 835 aa16.51■□□□□ 0.23
TRAPPC4-214ENST00000533632 C9orf131Q5VYM1 1079 aa16.51■□□□□ 0.23
TRAPPC4-214ENST00000533632 ZNF277Q9NRM2 450 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC4-214ENST00000533632 TLR7Q9NYK1 1049 aaKnown RBP16.51■□□□□ 0.23
TRAPPC4-214ENST00000533632 FPGT-TNNI3KV9GXZ4 949 aa16.51■□□□□ 0.23
TRAPPC4-214ENST00000533632 LMNB1P20700 586 aa16.5■□□□□ 0.23
TRAPPC4-214ENST00000533632 FGFR2P21802 821 aa16.5■□□□□ 0.23
TRAPPC4-214ENST00000533632 GRIPAP1Q4V328 841 aa16.5■□□□□ 0.23
TRAPPC4-214ENST00000533632 MPNDQ8N594 471 aa16.5■□□□□ 0.23
TRAPPC4-214ENST00000533632 PODXL2Q9NZ53 605 aa16.5■□□□□ 0.23
TRAPPC4-214ENST00000533632 POLLQ9UGP5 575 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms