RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 DDX19BQ9UMR2 479 aa21.59■■□□□ 1.05
CTSB-229ENST00000533572 GJA3Q9Y6H8 435 aa21.59■■□□□ 1.05
CTSB-229ENST00000533572 RTL9Q8NET4 1388 aa21.59■■□□□ 1.05
CTSB-229ENST00000533572 GRM8O00222 908 aa21.58■■□□□ 1.05
CTSB-229ENST00000533572 GNAI3P08754 354 aa21.58■■□□□ 1.05
CTSB-229ENST00000533572 IGHMBP2P38935 993 aaKnown RBP21.58■■□□□ 1.05
CTSB-229ENST00000533572 GPSM2P81274 684 aa21.58■■□□□ 1.05
CTSB-229ENST00000533572 MVPQ14764 893 aaKnown RBP21.58■■□□□ 1.05
CTSB-229ENST00000533572 ITPRIPQ8IWB1 547 aa21.58■■□□□ 1.05
CTSB-229ENST00000533572 SMC1BQ8NDV3 1235 aa21.58■■□□□ 1.05
CTSB-229ENST00000533572 L3MBTL3Q96JM7 780 aaPredicted RBP21.58■■□□□ 1.05
CTSB-229ENST00000533572 CASP7P55210 303 aa21.57■■□□□ 1.04
CTSB-229ENST00000533572 FSTL1Q12841 308 aa21.57■■□□□ 1.04
CTSB-229ENST00000533572 WASHC4Q2M389 1173 aa21.57■■□□□ 1.04
CTSB-229ENST00000533572 PANK1Q8TE04 598 aa21.57■■□□□ 1.04
CTSB-229ENST00000533572 ZNRF3Q9ULT6 936 aa21.57■■□□□ 1.04
CTSB-229ENST00000533572 CHMP3Q9Y3E7 222 aa21.57■■□□□ 1.04
CTSB-229ENST00000533572 COL4A5P29400 1685 aa21.56■■□□□ 1.04
CTSB-229ENST00000533572 UTYO14607 1347 aa21.56■■□□□ 1.04
CTSB-229ENST00000533572 RLBP1P12271 317 aa21.56■■□□□ 1.04
CTSB-229ENST00000533572 HSPA6P17066 643 aa21.56■■□□□ 1.04
CTSB-229ENST00000533572 LMOD1P29536 600 aaPredicted RBP21.56■■□□□ 1.04
CTSB-229ENST00000533572 HACL1Q9UJ83 578 aa21.56■■□□□ 1.04
CTSB-229ENST00000533572 GGA1Q9UJY5 639 aa21.56■■□□□ 1.04
CTSB-229ENST00000533572 TNNQ9UQP3 1299 aa21.56■■□□□ 1.04
CTSB-229ENST00000533572 COL4A1P02462 1669 aa21.56■■□□□ 1.04
CTSB-229ENST00000533572 POTECB2RU33 542 aa21.55■■□□□ 1.04
CTSB-229ENST00000533572 UFL1O94874 794 aa21.55■■□□□ 1.04
CTSB-229ENST00000533572 ITGA6P23229 1130 aa21.55■■□□□ 1.04
CTSB-229ENST00000533572 FAM161AQ3B820 660 aa21.55■■□□□ 1.04
CTSB-229ENST00000533572 DUOX1Q9NRD9 1551 aa21.55■■□□□ 1.04
CTSB-229ENST00000533572 XDHP47989 1333 aa21.55■■□□□ 1.04
CTSB-229ENST00000533572 G3V3G9 751 aa21.54■■□□□ 1.04
CTSB-229ENST00000533572 RIMBP2O15034 1052 aa21.54■■□□□ 1.04
CTSB-229ENST00000533572 AAMPQ13685 434 aa21.54■■□□□ 1.04
CTSB-229ENST00000533572 DCAF8Q5TAQ9 597 aa21.54■■□□□ 1.04
CTSB-229ENST00000533572 TBC1D16Q8TBP0 767 aa21.54■■□□□ 1.04
CTSB-229ENST00000533572 MPHOSPH8Q99549 860 aa21.54■■□□□ 1.04
CTSB-229ENST00000533572 USP44Q9H0E7 712 aa21.54■■□□□ 1.04
CTSB-229ENST00000533572 BSDC1Q9NW68 430 aaPredicted RBP21.54■■□□□ 1.04
CTSB-229ENST00000533572 PODXL2Q9NZ53 605 aa21.54■■□□□ 1.04
CTSB-229ENST00000533572 POLLQ9UGP5 575 aa21.54■■□□□ 1.04
CTSB-229ENST00000533572 COG6Q9Y2V7 657 aa21.54■■□□□ 1.04
CTSB-229ENST00000533572 SCN4AP35499 1836 aa21.53■■□□□ 1.04
CTSB-229ENST00000533572 ANKRD18BA2A2Z9 1011 aa21.53■■□□□ 1.04
CTSB-229ENST00000533572 CSF1RP07333 972 aa21.53■■□□□ 1.04
CTSB-229ENST00000533572 UBTFL1P0CB47 393 aaPredicted RBP21.53■■□□□ 1.04
CTSB-229ENST00000533572 ZC3H12CQ9C0D7 883 aaKnown RBP21.53■■□□□ 1.04
CTSB-229ENST00000533572 IFIT5Q13325 482 aaKnown RBP21.52■■□□□ 1.04
CTSB-229ENST00000533572 TNIP1Q15025 636 aa21.52■■□□□ 1.04
CTSB-229ENST00000533572 EAPPQ56P03 285 aaPredicted RBP21.52■■□□□ 1.04
CTSB-229ENST00000533572 C20orf194Q5TEA3 1177 aa21.52■■□□□ 1.04
CTSB-229ENST00000533572 CIAPIN1Q6FI81 312 aa21.52■■□□□ 1.04
CTSB-229ENST00000533572 TAF1DQ9H5J8 278 aaPredicted RBP21.52■■□□□ 1.04
CTSB-229ENST00000533572 ZBTB7BO15156 539 aaPredicted RBP21.51■■□□□ 1.03
CTSB-229ENST00000533572 ATP2B4P23634 1241 aa21.51■■□□□ 1.03
CTSB-229ENST00000533572 EPHX2P34913 555 aa21.51■■□□□ 1.03
CTSB-229ENST00000533572 TAF7LQ5H9L4 462 aa21.51■■□□□ 1.03
CTSB-229ENST00000533572 SPEF2Q9C093 1822 aa21.5■■□□□ 1.03
CTSB-229ENST00000533572 RAD17O75943 681 aa21.5■■□□□ 1.03
CTSB-229ENST00000533572 FOXO4P98177 505 aa21.5■■□□□ 1.03
CTSB-229ENST00000533572 CXCL9Q07325 125 aa21.5■■□□□ 1.03
CTSB-229ENST00000533572 CCDC57Q2TAC2 916 aa21.5■■□□□ 1.03
CTSB-229ENST00000533572 LMBR1LQ6UX01 489 aa21.5■■□□□ 1.03
CTSB-229ENST00000533572 GPR101Q96P66 508 aaPredicted RBP21.5■■□□□ 1.03
CTSB-229ENST00000533572 DBNDD1Q9H9R9 158 aa21.5■■□□□ 1.03
CTSB-229ENST00000533572 MINPP1Q9UNW1 487 aa21.5■■□□□ 1.03
CTSB-229ENST00000533572 GNAI2P04899 355 aa21.49■■□□□ 1.03
CTSB-229ENST00000533572 NBPF7P0C2Y1 421 aaPredicted RBP21.49■■□□□ 1.03
CTSB-229ENST00000533572 APLP1P51693 650 aa21.49■■□□□ 1.03
CTSB-229ENST00000533572 CHADLQ6NUI6 762 aa21.49■■□□□ 1.03
CTSB-229ENST00000533572 PNMA8AQ86V59 439 aaPredicted RBP21.49■■□□□ 1.03
CTSB-229ENST00000533572 LDHDQ86WU2 507 aa21.49■■□□□ 1.03
CTSB-229ENST00000533572 MEIS3Q99687 375 aa21.49■■□□□ 1.03
CTSB-229ENST00000533572 CLEC11AQ9Y240 323 aa21.49■■□□□ 1.03
CTSB-229ENST00000533572 LTBP1Q14766 1721 aa21.49■■□□□ 1.03
CTSB-229ENST00000533572 ECE2O60344 883 aa21.48■■□□□ 1.03
CTSB-229ENST00000533572 NEFLP07196 543 aa21.48■■□□□ 1.03
CTSB-229ENST00000533572 DOK7Q18PE1 504 aa21.48■■□□□ 1.03
CTSB-229ENST00000533572 ANKRD2Q9GZV1 360 aa21.48■■□□□ 1.03
CTSB-229ENST00000533572 SUCLG2Q96I99 432 aa21.47■■□□□ 1.03
CTSB-229ENST00000533572 YDJCA8MPS7 323 aa21.46■■□□□ 1.03
CTSB-229ENST00000533572 KCNJ4P48050 445 aa21.46■■□□□ 1.03
CTSB-229ENST00000533572 SCNN1DP51172 638 aa21.46■■□□□ 1.03
CTSB-229ENST00000533572 EPHA10Q5JZY3 1008 aa21.46■■□□□ 1.03
CTSB-229ENST00000533572 ZBTB40Q9NUA8 1239 aa21.46■■□□□ 1.03
CTSB-229ENST00000533572 POTEIP0CG38 1075 aa21.45■■□□□ 1.02
CTSB-229ENST00000533572 POTEJP0CG39 1038 aa21.45■■□□□ 1.02
CTSB-229ENST00000533572 GMPSP49915 693 aaPredicted RBP21.45■■□□□ 1.02
CTSB-229ENST00000533572 CRBNQ96SW2 442 aa21.45■■□□□ 1.02
CTSB-229ENST00000533572 LEMD3Q9Y2U8 911 aa21.45■■□□□ 1.02
CTSB-229ENST00000533572 EPS15P42566 896 aa21.44■■□□□ 1.02
CTSB-229ENST00000533572 CNNM1Q9NRU3 951 aa21.44■■□□□ 1.02
CTSB-229ENST00000533572 GPRC5DQ9NZD1 345 aa21.44■■□□□ 1.02
CTSB-229ENST00000533572 MED23Q9ULK4 1368 aa21.44■■□□□ 1.02
CTSB-229ENST00000533572 PSMD14O00487 310 aa21.43■■□□□ 1.02
CTSB-229ENST00000533572 CHRNDQ07001 517 aa21.43■■□□□ 1.02
CTSB-229ENST00000533572 RABL6Q3YEC7 729 aaPredicted RBP21.43■■□□□ 1.02
CTSB-229ENST00000533572 LDHAL6AQ6ZMR3 332 aa21.43■■□□□ 1.02
CTSB-229ENST00000533572 BICC1Q9H694 974 aaKnown RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms