RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 ATP2B4P23634 1241 aa15.45■□□□□ 0.06
SF3B2-213ENST00000533421 CXCL9Q07325 125 aa15.45■□□□□ 0.06
SF3B2-213ENST00000533421 ALDH1L2Q3SY69 923 aa15.45■□□□□ 0.06
SF3B2-213ENST00000533421 BEND3Q5T5X7 828 aa15.45■□□□□ 0.06
SF3B2-213ENST00000533421 SLC4A10Q6U841 1118 aa15.45■□□□□ 0.06
SF3B2-213ENST00000533421 USP50Q70EL3 339 aaPredicted RBP15.45■□□□□ 0.06
SF3B2-213ENST00000533421 TBC1D16Q8TBP0 767 aa15.45■□□□□ 0.06
SF3B2-213ENST00000533421 MPHOSPH8Q99549 860 aa15.45■□□□□ 0.06
SF3B2-213ENST00000533421 SRCIN1Q9C0H9 1055 aa15.45■□□□□ 0.06
SF3B2-213ENST00000533421 C9orf78Q9NZ63 289 aaPredicted RBP15.45■□□□□ 0.06
SF3B2-213ENST00000533421 DUOX1Q9NRD9 1551 aa15.45■□□□□ 0.06
SF3B2-213ENST00000533421 COL4A5P29400 1685 aa15.44■□□□□ 0.06
SF3B2-213ENST00000533421 GREM2Q9H772 168 aa15.44■□□□□ 0.06
SF3B2-213ENST00000533421 POLLQ9UGP5 575 aa15.44■□□□□ 0.06
SF3B2-213ENST00000533421 NOB1Q9ULX3 412 aaKnown RBP15.44■□□□□ 0.06
SF3B2-213ENST00000533421 ANKRD18BA2A2Z9 1011 aa15.43■□□□□ 0.06
SF3B2-213ENST00000533421 GRM8O00222 908 aa15.43■□□□□ 0.06
SF3B2-213ENST00000533421 RIMBP2O15034 1052 aa15.43■□□□□ 0.06
SF3B2-213ENST00000533421 ITGA6P23229 1130 aa15.43■□□□□ 0.06
SF3B2-213ENST00000533421 SCNN1DP51172 638 aa15.43■□□□□ 0.06
SF3B2-213ENST00000533421 SLC51AQ86UW1 340 aa15.43■□□□□ 0.06
SF3B2-213ENST00000533421 ANKRD2Q9GZV1 360 aa15.43■□□□□ 0.06
SF3B2-213ENST00000533421 ADARB2Q9NS39 739 aaKnown RBP15.43■□□□□ 0.06
SF3B2-213ENST00000533421 GPRC5DQ9NZD1 345 aa15.43■□□□□ 0.06
SF3B2-213ENST00000533421 ECE2O60344 883 aa15.42■□□□□ 0.06
SF3B2-213ENST00000533421 RAD17O75943 681 aa15.42■□□□□ 0.06
SF3B2-213ENST00000533421 CSF1RP07333 972 aa15.42■□□□□ 0.06
SF3B2-213ENST00000533421 RPS12P25398 132 aaKnown RBP15.42■□□□□ 0.06
SF3B2-213ENST00000533421 CASP7P55210 303 aa15.42■□□□□ 0.06
SF3B2-213ENST00000533421 IFIT5Q13325 482 aaKnown RBP15.42■□□□□ 0.06
SF3B2-213ENST00000533421 FRAT1Q92837 279 aaPredicted RBP15.42■□□□□ 0.06
SF3B2-213ENST00000533421 LTBP1Q14766 1721 aa15.42■□□□□ 0.06
SF3B2-213ENST00000533421 H7C1D1 291 aa15.41■□□□□ 0.06
SF3B2-213ENST00000533421 GMPSP49915 693 aaPredicted RBP15.41■□□□□ 0.06
SF3B2-213ENST00000533421 HTRA3P83110 453 aa15.41■□□□□ 0.06
SF3B2-213ENST00000533421 DBNDD1Q9H9R9 158 aa15.41■□□□□ 0.06
SF3B2-213ENST00000533421 CREBZFQ9NS37 354 aa15.41■□□□□ 0.06
SF3B2-213ENST00000533421 LEMD3Q9Y2U8 911 aa15.41■□□□□ 0.06
SF3B2-213ENST00000533421 CHMP3Q9Y3E7 222 aa15.41■□□□□ 0.06
SF3B2-213ENST00000533421 POTEIP0CG38 1075 aa15.4■□□□□ 0.06
SF3B2-213ENST00000533421 POTEJP0CG39 1038 aa15.4■□□□□ 0.06
SF3B2-213ENST00000533421 EPS15P42566 896 aa15.4■□□□□ 0.06
SF3B2-213ENST00000533421 CCDC57Q2TAC2 916 aa15.4■□□□□ 0.06
SF3B2-213ENST00000533421 FAM161AQ3B820 660 aa15.4■□□□□ 0.06
SF3B2-213ENST00000533421 TAF7LQ5H9L4 462 aa15.4■□□□□ 0.06
SF3B2-213ENST00000533421 DPF2Q92785 391 aa15.4■□□□□ 0.06
SF3B2-213ENST00000533421 KLRG1Q96E93 195 aa15.4■□□□□ 0.06
SF3B2-213ENST00000533421 MINPP1Q9UNW1 487 aa15.4■□□□□ 0.06
SF3B2-213ENST00000533421 COL4A1P02462 1669 aa15.4■□□□□ 0.06
SF3B2-213ENST00000533421 ADAMTSL1Q8N6G6 1762 aa15.39■□□□□ 0.05
SF3B2-213ENST00000533421 MED23Q9ULK4 1368 aa15.39■□□□□ 0.05
SF3B2-213ENST00000533421 SPEF2Q9C093 1822 aa15.39■□□□□ 0.05
SF3B2-213ENST00000533421 KCNJ4P48050 445 aa15.39■□□□□ 0.05
SF3B2-213ENST00000533421 CCT4P50991 539 aaKnown RBP15.39■□□□□ 0.05
SF3B2-213ENST00000533421 PODNQ7Z5L7 613 aa15.39■□□□□ 0.05
SF3B2-213ENST00000533421 CNTROBQ8N137 903 aa15.39■□□□□ 0.05
SF3B2-213ENST00000533421 YDJCA8MPS7 323 aa15.38■□□□□ 0.05
SF3B2-213ENST00000533421 PSMD14O00487 310 aa15.38■□□□□ 0.05
SF3B2-213ENST00000533421 DOK7Q18PE1 504 aa15.38■□□□□ 0.05
SF3B2-213ENST00000533421 ZC3H15Q8WU90 426 aaKnown RBP15.38■□□□□ 0.05
SF3B2-213ENST00000533421 CLUAP1Q96AJ1 413 aa15.38■□□□□ 0.05
SF3B2-213ENST00000533421 CNOT7Q9UIV1 285 aaKnown RBP15.38■□□□□ 0.05
SF3B2-213ENST00000533421 HDAC5Q9UQL6 1122 aa15.38■□□□□ 0.05
SF3B2-213ENST00000533421 PASKQ96RG2 1323 aa15.38■□□□□ 0.05
SF3B2-213ENST00000533421 TMEM88BA6NKF7 163 aa15.37■□□□□ 0.05
SF3B2-213ENST00000533421 FOXO4P98177 505 aa15.37■□□□□ 0.05
SF3B2-213ENST00000533421 LMBR1LQ6UX01 489 aa15.37■□□□□ 0.05
SF3B2-213ENST00000533421 DNAJC5GQ8N7S2 189 aa15.37■□□□□ 0.05
SF3B2-213ENST00000533421 KIF16BQ96L93 1317 aa15.37■□□□□ 0.05
SF3B2-213ENST00000533421 MAP1SQ66K74 1059 aaPredicted RBP15.36■□□□□ 0.05
SF3B2-213ENST00000533421 MICALL2Q8IY33 904 aa15.36■□□□□ 0.05
SF3B2-213ENST00000533421 AGBL3Q8NEM8 1001 aa15.36■□□□□ 0.05
SF3B2-213ENST00000533421 API5Q9BZZ5 524 aaKnown RBP15.36■□□□□ 0.05
SF3B2-213ENST00000533421 COA1Q9GZY4 146 aa15.36■□□□□ 0.05
SF3B2-213ENST00000533421 UTYO14607 1347 aa15.36■□□□□ 0.05
SF3B2-213ENST00000533421 PCNTO95613 3336 aa15.36■□□□□ 0.05
SF3B2-213ENST00000533421 USP17L3A6NCW0 530 aa15.35■□□□□ 0.05
SF3B2-213ENST00000533421 USP17L4A6NCW7 530 aa15.35■□□□□ 0.05
SF3B2-213ENST00000533421 PLIN1O60240 522 aa15.35■□□□□ 0.05
SF3B2-213ENST00000533421 ITGBL1O95965 494 aaPredicted RBP15.35■□□□□ 0.05
SF3B2-213ENST00000533421 VIL1P09327 827 aaKnown RBP15.35■□□□□ 0.05
SF3B2-213ENST00000533421 MMP14P50281 582 aa15.35■□□□□ 0.05
SF3B2-213ENST00000533421 BRPF1P55201 1214 aaPredicted RBP15.35■□□□□ 0.05
SF3B2-213ENST00000533421 CHRNDQ07001 517 aa15.35■□□□□ 0.05
SF3B2-213ENST00000533421 LDHAL6AQ6ZMR3 332 aa15.35■□□□□ 0.05
SF3B2-213ENST00000533421 USP17L1Q7RTZ2 530 aa15.35■□□□□ 0.05
SF3B2-213ENST00000533421 GPR101Q96P66 508 aaPredicted RBP15.35■□□□□ 0.05
SF3B2-213ENST00000533421 CNNM1Q9NRU3 951 aa15.35■□□□□ 0.05
SF3B2-213ENST00000533421 RCAN3Q9UKA8 241 aa15.35■□□□□ 0.05
SF3B2-213ENST00000533421 ZNF804BA4D1E1 1349 aa15.35■□□□□ 0.05
SF3B2-213ENST00000533421 MYO3BQ8WXR4 1341 aa15.35■□□□□ 0.05
SF3B2-213ENST00000533421 ZNF609O15014 1411 aa15.34■□□□□ 0.05
SF3B2-213ENST00000533421 TRIM27P14373 513 aa15.34■□□□□ 0.05
SF3B2-213ENST00000533421 RSBN1LQ6PCB5 846 aaPredicted RBP15.33■□□□□ 0.04
SF3B2-213ENST00000533421 JMYQ8N9B5 988 aa15.33■□□□□ 0.04
SF3B2-213ENST00000533421 ZBTB12Q9Y330 459 aaPredicted RBP15.33■□□□□ 0.04
SF3B2-213ENST00000533421 PSME4Q14997 1843 aa15.32■□□□□ 0.04
SF3B2-213ENST00000533421 IPO8O15397 1037 aaKnown RBP15.32■□□□□ 0.04
SF3B2-213ENST00000533421 NBPF7P0C2Y1 421 aaPredicted RBP15.32■□□□□ 0.04
SF3B2-213ENST00000533421 RLBP1P12271 317 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms