RNA–Protein interactions for RNA: ENST00000533155.5

NCAPD3-210, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 3

Gene NCAPD3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-210ENST00000533155 SPEF2Q9C093 1822 aa21.89■■□□□ 1.09
NCAPD3-210ENST00000533155 XDHP47989 1333 aa21.88■■□□□ 1.09
NCAPD3-210ENST00000533155 RAD17O75943 681 aa21.88■■□□□ 1.09
NCAPD3-210ENST00000533155 USP50Q70EL3 339 aaPredicted RBP21.88■■□□□ 1.09
NCAPD3-210ENST00000533155 MRPL50Q8N5N7 158 aaKnown RBP21.88■■□□□ 1.09
NCAPD3-210ENST00000533155 BCL2L13Q9BXK5 485 aa21.88■■□□□ 1.09
NCAPD3-210ENST00000533155 BSDC1Q9NW68 430 aaPredicted RBP21.88■■□□□ 1.09
NCAPD3-210ENST00000533155 YDJCA8MPS7 323 aa21.87■■□□□ 1.09
NCAPD3-210ENST00000533155 CSF1RP07333 972 aa21.87■■□□□ 1.09
NCAPD3-210ENST00000533155 IGHMBP2P38935 993 aaKnown RBP21.87■■□□□ 1.09
NCAPD3-210ENST00000533155 GMPSP49915 693 aaPredicted RBP21.87■■□□□ 1.09
NCAPD3-210ENST00000533155 SLC4A10Q6U841 1118 aa21.87■■□□□ 1.09
NCAPD3-210ENST00000533155 TRMT2AQ8IZ69 625 aaKnown RBP21.87■■□□□ 1.09
NCAPD3-210ENST00000533155 DBNDD1Q9H9R9 158 aa21.87■■□□□ 1.09
NCAPD3-210ENST00000533155 ADARB2Q9NS39 739 aaKnown RBP21.87■■□□□ 1.09
NCAPD3-210ENST00000533155 PASKQ96RG2 1323 aa21.86■■□□□ 1.09
NCAPD3-210ENST00000533155 G3V3G9 751 aa21.86■■□□□ 1.09
NCAPD3-210ENST00000533155 ECE2O60344 883 aa21.86■■□□□ 1.09
NCAPD3-210ENST00000533155 ATP2B4P23634 1241 aa21.86■■□□□ 1.09
NCAPD3-210ENST00000533155 DCAF8Q5TAQ9 597 aa21.86■■□□□ 1.09
NCAPD3-210ENST00000533155 CREBZFQ9NS37 354 aa21.86■■□□□ 1.09
NCAPD3-210ENST00000533155 ALDH1L1O75891 902 aa21.85■■□□□ 1.09
NCAPD3-210ENST00000533155 ITGA6P23229 1130 aa21.85■■□□□ 1.09
NCAPD3-210ENST00000533155 MIER1Q8N108 512 aa21.85■■□□□ 1.09
NCAPD3-210ENST00000533155 CNTROBQ8N137 903 aa21.85■■□□□ 1.09
NCAPD3-210ENST00000533155 SRCIN1Q9C0H9 1055 aa21.85■■□□□ 1.09
NCAPD3-210ENST00000533155 ITGBL1O95965 494 aaPredicted RBP21.84■■□□□ 1.09
NCAPD3-210ENST00000533155 DOK7Q18PE1 504 aa21.84■■□□□ 1.09
NCAPD3-210ENST00000533155 MAP1SQ66K74 1059 aaPredicted RBP21.84■■□□□ 1.09
NCAPD3-210ENST00000533155 SSH1Q8WYL5 1049 aa21.84■■□□□ 1.09
NCAPD3-210ENST00000533155 GPR101Q96P66 508 aaPredicted RBP21.84■■□□□ 1.09
NCAPD3-210ENST00000533155 C9orf78Q9NZ63 289 aaPredicted RBP21.84■■□□□ 1.09
NCAPD3-210ENST00000533155 MINPP1Q9UNW1 487 aa21.84■■□□□ 1.09
NCAPD3-210ENST00000533155 PTPRCP08575 1304 aa21.83■■□□□ 1.09
NCAPD3-210ENST00000533155 GRM8O00222 908 aa21.83■■□□□ 1.09
NCAPD3-210ENST00000533155 PSMD14O00487 310 aa21.83■■□□□ 1.09
NCAPD3-210ENST00000533155 FAM161AQ3B820 660 aa21.83■■□□□ 1.09
NCAPD3-210ENST00000533155 ALDH1L2Q3SY69 923 aa21.83■■□□□ 1.09
NCAPD3-210ENST00000533155 MPHOSPH8Q99549 860 aa21.83■■□□□ 1.09
NCAPD3-210ENST00000533155 RPS12P25398 132 aaKnown RBP21.82■■□□□ 1.08
NCAPD3-210ENST00000533155 FOXO4P98177 505 aa21.82■■□□□ 1.08
NCAPD3-210ENST00000533155 DPF2Q92785 391 aa21.82■■□□□ 1.08
NCAPD3-210ENST00000533155 ANKRD18BA2A2Z9 1011 aa21.81■■□□□ 1.08
NCAPD3-210ENST00000533155 H7C1D1 291 aa21.81■■□□□ 1.08
NCAPD3-210ENST00000533155 JMYQ8N9B5 988 aa21.81■■□□□ 1.08
NCAPD3-210ENST00000533155 CNOT7Q9UIV1 285 aaKnown RBP21.81■■□□□ 1.08
NCAPD3-210ENST00000533155 TMEM88BA6NKF7 163 aa21.8■■□□□ 1.08
NCAPD3-210ENST00000533155 CT47B1P0C2W7 299 aaPredicted RBP21.8■■□□□ 1.08
NCAPD3-210ENST00000533155 IFIT5Q13325 482 aaKnown RBP21.8■■□□□ 1.08
NCAPD3-210ENST00000533155 ANKRD2Q9GZV1 360 aa21.8■■□□□ 1.08
NCAPD3-210ENST00000533155 CHMP3Q9Y3E7 222 aa21.8■■□□□ 1.08
NCAPD3-210ENST00000533155 MED23Q9ULK4 1368 aa21.79■■□□□ 1.08
NCAPD3-210ENST00000533155 CCT4P50991 539 aaKnown RBP21.79■■□□□ 1.08
NCAPD3-210ENST00000533155 MICALL2Q8IY33 904 aa21.79■■□□□ 1.08
NCAPD3-210ENST00000533155 KCNQ5Q9NR82 932 aa21.79■■□□□ 1.08
NCAPD3-210ENST00000533155 LEMD3Q9Y2U8 911 aa21.79■■□□□ 1.08
NCAPD3-210ENST00000533155 ZBTB12Q9Y330 459 aaPredicted RBP21.79■■□□□ 1.08
NCAPD3-210ENST00000533155 SCN9AQ15858 1988 aa21.79■■□□□ 1.08
NCAPD3-210ENST00000533155 LMBR1LQ6UX01 489 aa21.78■■□□□ 1.08
NCAPD3-210ENST00000533155 PODNQ7Z5L7 613 aa21.78■■□□□ 1.08
NCAPD3-210ENST00000533155 ZC3H15Q8WU90 426 aaKnown RBP21.78■■□□□ 1.08
NCAPD3-210ENST00000533155 SMC4Q9NTJ3 1288 aa21.78■■□□□ 1.08
NCAPD3-210ENST00000533155 VIL1P09327 827 aaKnown RBP21.77■■□□□ 1.08
NCAPD3-210ENST00000533155 EPHA10Q5JZY3 1008 aa21.77■■□□□ 1.08
NCAPD3-210ENST00000533155 PSME4Q14997 1843 aa21.76■■□□□ 1.07
NCAPD3-210ENST00000533155 CCDC57Q2TAC2 916 aa21.76■■□□□ 1.07
NCAPD3-210ENST00000533155 WTIPA6NIX2 430 aaPredicted RBP21.75■■□□□ 1.07
NCAPD3-210ENST00000533155 TRPM4Q8TD43 1214 aa21.75■■□□□ 1.07
NCAPD3-210ENST00000533155 PGAP2Q9UHJ9 254 aa21.75■■□□□ 1.07
NCAPD3-210ENST00000533155 ZNF804BA4D1E1 1349 aa21.75■■□□□ 1.07
NCAPD3-210ENST00000533155 UTYO14607 1347 aa21.75■■□□□ 1.07
NCAPD3-210ENST00000533155 ZNF609O15014 1411 aa21.74■■□□□ 1.07
NCAPD3-210ENST00000533155 NBPF7P0C2Y1 421 aaPredicted RBP21.74■■□□□ 1.07
NCAPD3-210ENST00000533155 KCNJ4P48050 445 aa21.74■■□□□ 1.07
NCAPD3-210ENST00000533155 CHRNDQ07001 517 aa21.74■■□□□ 1.07
NCAPD3-210ENST00000533155 TAF7LQ5H9L4 462 aa21.74■■□□□ 1.07
NCAPD3-210ENST00000533155 AGBL3Q8NEM8 1001 aa21.74■■□□□ 1.07
NCAPD3-210ENST00000533155 SUCLG2Q96I99 432 aa21.74■■□□□ 1.07
NCAPD3-210ENST00000533155 COA1Q9GZY4 146 aa21.74■■□□□ 1.07
NCAPD3-210ENST00000533155 MKRN1Q9UHC7 482 aaKnown RBP21.74■■□□□ 1.07
NCAPD3-210ENST00000533155 CNTNAP1P78357 1384 aa21.74■■□□□ 1.07
NCAPD3-210ENST00000533155 TRPM7Q96QT4 1865 aa21.73■■□□□ 1.07
NCAPD3-210ENST00000533155 SHTN1A0MZ66 631 aa21.73■■□□□ 1.07
NCAPD3-210ENST00000533155 USP17L3A6NCW0 530 aa21.73■■□□□ 1.07
NCAPD3-210ENST00000533155 USP17L4A6NCW7 530 aa21.73■■□□□ 1.07
NCAPD3-210ENST00000533155 HIRAP54198 1017 aaPredicted RBP21.73■■□□□ 1.07
NCAPD3-210ENST00000533155 RSBN1LQ6PCB5 846 aaPredicted RBP21.73■■□□□ 1.07
NCAPD3-210ENST00000533155 USP17L1Q7RTZ2 530 aa21.73■■□□□ 1.07
NCAPD3-210ENST00000533155 POLR2AP24928 1970 aaKnown RBP21.73■■□□□ 1.07
NCAPD3-210ENST00000533155 BRPF1P55201 1214 aaPredicted RBP21.72■■□□□ 1.07
NCAPD3-210ENST00000533155 SAMD7Q7Z3H4 446 aa21.72■■□□□ 1.07
NCAPD3-210ENST00000533155 KAZALD1Q96I82 304 aa21.72■■□□□ 1.07
NCAPD3-210ENST00000533155 TBC1D10BQ4KMP7 808 aaPredicted RBP21.71■■□□□ 1.07
NCAPD3-210ENST00000533155 LDHAL6AQ6ZMR3 332 aa21.71■■□□□ 1.07
NCAPD3-210ENST00000533155 CDC37L1Q7L3B6 337 aa21.71■■□□□ 1.07
NCAPD3-210ENST00000533155 ZNF594Q96JF6 807 aaPredicted RBP21.71■■□□□ 1.07
NCAPD3-210ENST00000533155 ABT1Q9ULW3 272 aaKnown RBP21.71■■□□□ 1.07
NCAPD3-210ENST00000533155 NOB1Q9ULX3 412 aaKnown RBP21.71■■□□□ 1.07
NCAPD3-210ENST00000533155 A0A1B0GUL6 1792 aa21.7■■□□□ 1.06
NCAPD3-210ENST00000533155 TXNRD3Q86VQ6 643 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms