RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 UFL1O94874 794 aa19.42■□□□□ 0.7
CPSF1-210ENST00000532935 HSPA6P17066 643 aa19.42■□□□□ 0.7
CPSF1-210ENST00000532935 EPHA10Q5JZY3 1008 aa19.42■□□□□ 0.7
CPSF1-210ENST00000532935 SMC1BQ8NDV3 1235 aa19.42■□□□□ 0.7
CPSF1-210ENST00000532935 GPR101Q96P66 508 aaPredicted RBP19.42■□□□□ 0.7
CPSF1-210ENST00000532935 TAF1DQ9H5J8 278 aaPredicted RBP19.42■□□□□ 0.7
CPSF1-210ENST00000532935 NOB1Q9ULX3 412 aaKnown RBP19.42■□□□□ 0.7
CPSF1-210ENST00000532935 MINPP1Q9UNW1 487 aa19.42■□□□□ 0.7
CPSF1-210ENST00000532935 CHMP3Q9Y3E7 222 aa19.42■□□□□ 0.7
CPSF1-210ENST00000532935 UTYO14607 1347 aa19.42■□□□□ 0.7
CPSF1-210ENST00000532935 SCN9AQ15858 1988 aa19.41■□□□□ 0.7
CPSF1-210ENST00000532935 ANKRD18BA2A2Z9 1011 aa19.41■□□□□ 0.7
CPSF1-210ENST00000532935 NBPF7P0C2Y1 421 aaPredicted RBP19.41■□□□□ 0.7
CPSF1-210ENST00000532935 CXCL9Q07325 125 aa19.41■□□□□ 0.7
CPSF1-210ENST00000532935 LMBR1LQ6UX01 489 aa19.41■□□□□ 0.7
CPSF1-210ENST00000532935 HACL1Q9UJ83 578 aa19.41■□□□□ 0.7
CPSF1-210ENST00000532935 ZBED9Q6R2W3 1325 aa19.41■□□□□ 0.7
CPSF1-210ENST00000532935 PSME4Q14997 1843 aa19.41■□□□□ 0.7
CPSF1-210ENST00000532935 ADAMTSL1Q8N6G6 1762 aa19.4■□□□□ 0.7
CPSF1-210ENST00000532935 YDJCA8MPS7 323 aa19.4■□□□□ 0.7
CPSF1-210ENST00000532935 IFIT5Q13325 482 aaKnown RBP19.4■□□□□ 0.7
CPSF1-210ENST00000532935 SUCLG2Q96I99 432 aa19.4■□□□□ 0.7
CPSF1-210ENST00000532935 MPHOSPH8Q99549 860 aa19.4■□□□□ 0.7
CPSF1-210ENST00000532935 ZC3H12CQ9C0D7 883 aaKnown RBP19.4■□□□□ 0.7
CPSF1-210ENST00000532935 DBNDD1Q9H9R9 158 aa19.4■□□□□ 0.7
CPSF1-210ENST00000532935 RAD17O75943 681 aa19.39■□□□□ 0.69
CPSF1-210ENST00000532935 ATP2B4P23634 1241 aa19.39■□□□□ 0.69
CPSF1-210ENST00000532935 CIAPIN1Q6FI81 312 aa19.39■□□□□ 0.69
CPSF1-210ENST00000532935 API5Q9BZZ5 524 aaKnown RBP19.39■□□□□ 0.69
CPSF1-210ENST00000532935 POTEIP0CG38 1075 aa19.38■□□□□ 0.69
CPSF1-210ENST00000532935 POTEJP0CG39 1038 aa19.38■□□□□ 0.69
CPSF1-210ENST00000532935 LMOD1P29536 600 aaPredicted RBP19.38■□□□□ 0.69
CPSF1-210ENST00000532935 EPHX2P34913 555 aa19.38■□□□□ 0.69
CPSF1-210ENST00000532935 SCNN1DP51172 638 aa19.38■□□□□ 0.69
CPSF1-210ENST00000532935 TNIP1Q15025 636 aa19.38■□□□□ 0.69
CPSF1-210ENST00000532935 DOK7Q18PE1 504 aa19.38■□□□□ 0.69
CPSF1-210ENST00000532935 KAZALD1Q96I82 304 aa19.38■□□□□ 0.69
CPSF1-210ENST00000532935 KIF16BQ96L93 1317 aa19.38■□□□□ 0.69
CPSF1-210ENST00000532935 ECE2O60344 883 aa19.37■□□□□ 0.69
CPSF1-210ENST00000532935 CCT4P50991 539 aaKnown RBP19.37■□□□□ 0.69
CPSF1-210ENST00000532935 USP44Q9H0E7 712 aa19.37■□□□□ 0.69
CPSF1-210ENST00000532935 CCDC57Q2TAC2 916 aa19.36■□□□□ 0.69
CPSF1-210ENST00000532935 EAPPQ56P03 285 aaPredicted RBP19.36■□□□□ 0.69
CPSF1-210ENST00000532935 CHADLQ6NUI6 762 aa19.36■□□□□ 0.69
CPSF1-210ENST00000532935 LDHDQ86WU2 507 aa19.36■□□□□ 0.69
CPSF1-210ENST00000532935 ARHGAP45Q92619 1136 aa19.36■□□□□ 0.69
CPSF1-210ENST00000532935 ANKRD2Q9GZV1 360 aa19.36■□□□□ 0.69
CPSF1-210ENST00000532935 WTIPA6NIX2 430 aaPredicted RBP19.35■□□□□ 0.69
CPSF1-210ENST00000532935 G3V3G9 751 aa19.35■□□□□ 0.69
CPSF1-210ENST00000532935 EPS15P42566 896 aa19.35■□□□□ 0.69
CPSF1-210ENST00000532935 GMPSP49915 693 aaPredicted RBP19.35■□□□□ 0.69
CPSF1-210ENST00000532935 TAF7LQ5H9L4 462 aa19.35■□□□□ 0.69
CPSF1-210ENST00000532935 DCAF8Q5TAQ9 597 aa19.35■□□□□ 0.69
CPSF1-210ENST00000532935 PNMA8AQ86V59 439 aaPredicted RBP19.35■□□□□ 0.69
CPSF1-210ENST00000532935 BICC1Q9H694 974 aaKnown RBP19.35■□□□□ 0.69
CPSF1-210ENST00000532935 MED23Q9ULK4 1368 aa19.34■□□□□ 0.69
CPSF1-210ENST00000532935 BCAR3O75815 825 aa19.34■□□□□ 0.69
CPSF1-210ENST00000532935 APLP1P51693 650 aa19.34■□□□□ 0.69
CPSF1-210ENST00000532935 CHRNDQ07001 517 aa19.34■□□□□ 0.69
CPSF1-210ENST00000532935 RABL6Q3YEC7 729 aaPredicted RBP19.34■□□□□ 0.69
CPSF1-210ENST00000532935 ZNF594Q96JF6 807 aaPredicted RBP19.34■□□□□ 0.69
CPSF1-210ENST00000532935 GPRC5DQ9NZD1 345 aa19.34■□□□□ 0.69
CPSF1-210ENST00000532935 LEMD3Q9Y2U8 911 aa19.34■□□□□ 0.69
CPSF1-210ENST00000532935 ZNF646O15015 1829 aaPredicted RBP19.33■□□□□ 0.69
CPSF1-210ENST00000532935 PSMD14O00487 310 aa19.33■□□□□ 0.68
CPSF1-210ENST00000532935 ANKRD44Q8N8A2 993 aa19.33■□□□□ 0.68
CPSF1-210ENST00000532935 KCNQ5Q9NR82 932 aa19.33■□□□□ 0.68
CPSF1-210ENST00000532935 CLEC11AQ9Y240 323 aa19.33■□□□□ 0.68
CPSF1-210ENST00000532935 ZNF804BA4D1E1 1349 aa19.32■□□□□ 0.68
CPSF1-210ENST00000532935 IPO8O15397 1037 aaKnown RBP19.32■□□□□ 0.68
CPSF1-210ENST00000532935 LDHAL6AQ6ZMR3 332 aa19.32■□□□□ 0.68
CPSF1-210ENST00000532935 KCNJ4P48050 445 aa19.31■□□□□ 0.68
CPSF1-210ENST00000532935 CNNM1Q9NRU3 951 aa19.31■□□□□ 0.68
CPSF1-210ENST00000532935 ADARB2Q9NS39 739 aaKnown RBP19.31■□□□□ 0.68
CPSF1-210ENST00000532935 ZBTB12Q9Y330 459 aaPredicted RBP19.31■□□□□ 0.68
CPSF1-210ENST00000532935 TAF5LO75529 589 aa19.3■□□□□ 0.68
CPSF1-210ENST00000532935 TRIM27P14373 513 aa19.3■□□□□ 0.68
CPSF1-210ENST00000532935 ATF7IPQ6VMQ6 1270 aa19.3■□□□□ 0.68
CPSF1-210ENST00000532935 USP50Q70EL3 339 aaPredicted RBP19.3■□□□□ 0.68
CPSF1-210ENST00000532935 HELBQ8NG08 1087 aaPredicted RBP19.3■□□□□ 0.68
CPSF1-210ENST00000532935 DPF2Q92785 391 aa19.3■□□□□ 0.68
CPSF1-210ENST00000532935 FRAT1Q92837 279 aaPredicted RBP19.3■□□□□ 0.68
CPSF1-210ENST00000532935 VIL1P09327 827 aaKnown RBP19.29■□□□□ 0.68
CPSF1-210ENST00000532935 UBTFL1P0CB47 393 aaPredicted RBP19.29■□□□□ 0.68
CPSF1-210ENST00000532935 RPS12P25398 132 aaKnown RBP19.29■□□□□ 0.68
CPSF1-210ENST00000532935 INTS3Q68E01 1043 aaKnown RBP19.29■□□□□ 0.68
CPSF1-210ENST00000532935 PODNQ7Z5L7 613 aa19.29■□□□□ 0.68
CPSF1-210ENST00000532935 TXNRD3Q86VQ6 643 aa19.29■□□□□ 0.68
CPSF1-210ENST00000532935 CNOT7Q9UIV1 285 aaKnown RBP19.29■□□□□ 0.68
CPSF1-210ENST00000532935 SNAP23O00161 211 aa19.28■□□□□ 0.68
CPSF1-210ENST00000532935 KLRK1P26718 216 aa19.28■□□□□ 0.68
CPSF1-210ENST00000532935 COA1Q9GZY4 146 aa19.28■□□□□ 0.68
CPSF1-210ENST00000532935 TNNQ9UQP3 1299 aa19.28■□□□□ 0.68
CPSF1-210ENST00000532935 TRPM7Q96QT4 1865 aa19.27■□□□□ 0.68
CPSF1-210ENST00000532935 POLR2AP24928 1970 aaKnown RBP19.27■□□□□ 0.68
CPSF1-210ENST00000532935 SHTN1A0MZ66 631 aa19.27■□□□□ 0.68
CPSF1-210ENST00000532935 H7C1D1 291 aa19.27■□□□□ 0.68
CPSF1-210ENST00000532935 PLIN1O60240 522 aa19.27■□□□□ 0.68
CPSF1-210ENST00000532935 HTRA3P83110 453 aa19.27■□□□□ 0.68
CPSF1-210ENST00000532935 MAP1SQ66K74 1059 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms