RNA–Protein interactions for RNA: ENST00000532652.1

AP004550.1-201, humanhuman

TSL 3 BASIC

Gene AP004550.1, Length 514 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004550.1-201ENST00000532652 DOK7Q18PE1 504 aa16.55■□□□□ 0.24
AP004550.1-201ENST00000532652 CSRNP1Q96S65 589 aa16.55■□□□□ 0.24
AP004550.1-201ENST00000532652 BABAM1Q9NWV8 329 aa16.55■□□□□ 0.24
AP004550.1-201ENST00000532652 CEP290O15078 2479 aa16.55■□□□□ 0.24
AP004550.1-201ENST00000532652 RIPK4P57078 832 aa16.54■□□□□ 0.24
AP004550.1-201ENST00000532652 KIF4BQ2VIQ3 1234 aa16.54■□□□□ 0.24
AP004550.1-201ENST00000532652 GGA3Q9NZ52 723 aa16.54■□□□□ 0.24
AP004550.1-201ENST00000532652 ASTN2O75129 1339 aaPredicted RBP16.53■□□□□ 0.24
AP004550.1-201ENST00000532652 SF3B3Q15393 1217 aaKnown RBP16.53■□□□□ 0.24
AP004550.1-201ENST00000532652 SULF1Q8IWU6 871 aa16.53■□□□□ 0.24
AP004550.1-201ENST00000532652 CDCA5Q96FF9 252 aa16.53■□□□□ 0.24
AP004550.1-201ENST00000532652 FAM89AQ96GI7 184 aa16.53■□□□□ 0.24
AP004550.1-201ENST00000532652 EYA3Q99504 573 aa16.53■□□□□ 0.24
AP004550.1-201ENST00000532652 ECM29Q5VYK3 1845 aa16.53■□□□□ 0.24
AP004550.1-201ENST00000532652 CTU1Q7Z7A3 348 aaKnown RBP16.52■□□□□ 0.24
AP004550.1-201ENST00000532652 TBC1D16Q8TBP0 767 aa16.52■□□□□ 0.24
AP004550.1-201ENST00000532652 VIL1P09327 827 aaKnown RBP16.51■□□□□ 0.23
AP004550.1-201ENST00000532652 KRT24Q2M2I5 525 aa16.51■□□□□ 0.23
AP004550.1-201ENST00000532652 RASAL3Q86YV0 1011 aa16.51■□□□□ 0.23
AP004550.1-201ENST00000532652 ISCA1Q9BUE6 129 aa16.51■□□□□ 0.23
AP004550.1-201ENST00000532652 CHPF2Q9P2E5 772 aa16.51■□□□□ 0.23
AP004550.1-201ENST00000532652 ATP5J2-PTCD1G3V325 749 aa16.5■□□□□ 0.23
AP004550.1-201ENST00000532652 RTL5Q5HYW3 569 aaPredicted RBP16.5■□□□□ 0.23
AP004550.1-201ENST00000532652 PRPF38BQ5VTL8 546 aaKnown RBP16.5■□□□□ 0.23
AP004550.1-201ENST00000532652 REM2Q8IYK8 340 aaPredicted RBP16.5■□□□□ 0.23
AP004550.1-201ENST00000532652 PLBD2Q8NHP8 589 aa16.5■□□□□ 0.23
AP004550.1-201ENST00000532652 LAMB1P07942 1786 aa16.5■□□□□ 0.23
AP004550.1-201ENST00000532652 TMPOP42166 694 aaKnown RBP16.49■□□□□ 0.23
AP004550.1-201ENST00000532652 RPS8P62241 208 aaKnown RBP16.49■□□□□ 0.23
AP004550.1-201ENST00000532652 ANKRD13DQ6ZTN6 518 aa16.49■□□□□ 0.23
AP004550.1-201ENST00000532652 ZC3H12CQ9C0D7 883 aaKnown RBP16.49■□□□□ 0.23
AP004550.1-201ENST00000532652 RBBP6Q7Z6E9 1792 aaKnown RBP16.49■□□□□ 0.23
AP004550.1-201ENST00000532652 HTTP42858 3142 aa16.48■□□□□ 0.23
AP004550.1-201ENST00000532652 ZNF609O15014 1411 aa16.48■□□□□ 0.23
AP004550.1-201ENST00000532652 LMOD3Q0VAK6 560 aa16.48■□□□□ 0.23
AP004550.1-201ENST00000532652 SCARF1Q14162 830 aa16.48■□□□□ 0.23
AP004550.1-201ENST00000532652 ANGEL2Q5VTE6 544 aaKnown RBP16.48■□□□□ 0.23
AP004550.1-201ENST00000532652 HPS5Q9UPZ3 1129 aa16.48■□□□□ 0.23
AP004550.1-201ENST00000532652 BRCA2P51587 3418 aa16.48■□□□□ 0.23
AP004550.1-201ENST00000532652 G3V3G9 751 aa16.47■□□□□ 0.23
AP004550.1-201ENST00000532652 IRS4O14654 1257 aaPredicted RBP16.47■□□□□ 0.23
AP004550.1-201ENST00000532652 UFL1O94874 794 aa16.47■□□□□ 0.23
AP004550.1-201ENST00000532652 ZNF280AP59817 542 aaPredicted RBP16.47■□□□□ 0.23
AP004550.1-201ENST00000532652 DCAF8Q5TAQ9 597 aa16.47■□□□□ 0.23
AP004550.1-201ENST00000532652 PODXL2Q9NZ53 605 aa16.47■□□□□ 0.23
AP004550.1-201ENST00000532652 CACNA1FO60840 1977 aa16.46■□□□□ 0.23
AP004550.1-201ENST00000532652 CHL1O00533 1208 aa16.46■□□□□ 0.23
AP004550.1-201ENST00000532652 FKBP1BP68106 108 aa16.46■□□□□ 0.23
AP004550.1-201ENST00000532652 HDGFL1Q5TGJ6 251 aa16.46■□□□□ 0.23
AP004550.1-201ENST00000532652 RSBN1LQ6PCB5 846 aaPredicted RBP16.46■□□□□ 0.23
AP004550.1-201ENST00000532652 AGBL3Q8NEM8 1001 aa16.46■□□□□ 0.23
AP004550.1-201ENST00000532652 SEC31BQ9NQW1 1179 aa16.46■□□□□ 0.23
AP004550.1-201ENST00000532652 MOB2Q70IA6 237 aa16.45■□□□□ 0.22
AP004550.1-201ENST00000532652 ZNF296Q8WUU4 475 aaPredicted RBP16.45■□□□□ 0.22
AP004550.1-201ENST00000532652 ANKIB1Q9P2G1 1089 aa16.45■□□□□ 0.22
AP004550.1-201ENST00000532652 GGA1Q9UJY5 639 aa16.45■□□□□ 0.22
AP004550.1-201ENST00000532652 HDAC9Q9UKV0 1011 aa16.45■□□□□ 0.22
AP004550.1-201ENST00000532652 SCAF8Q9UPN6 1271 aaKnown RBP16.45■□□□□ 0.22
AP004550.1-201ENST00000532652 LAS1LQ9Y4W2 734 aaKnown RBP16.45■□□□□ 0.22
AP004550.1-201ENST00000532652 TBC1D8O95759 1140 aa16.44■□□□□ 0.22
AP004550.1-201ENST00000532652 TRIM28Q13263 835 aaKnown RBP16.44■□□□□ 0.22
AP004550.1-201ENST00000532652 NEUROD2Q15784 382 aa16.44■□□□□ 0.22
AP004550.1-201ENST00000532652 PKN2Q16513 984 aaKnown RBP16.44■□□□□ 0.22
AP004550.1-201ENST00000532652 MYOZ2Q9NPC6 264 aa16.44■□□□□ 0.22
AP004550.1-201ENST00000532652 DBF4Q9UBU7 674 aaPredicted RBP16.44■□□□□ 0.22
AP004550.1-201ENST00000532652 PITPNM2Q9BZ72 1349 aa16.44■□□□□ 0.22
AP004550.1-201ENST00000532652 UBE2Q2LH0YL09 131 aa16.43■□□□□ 0.22
AP004550.1-201ENST00000532652 GMLQ99445 158 aa16.43■□□□□ 0.22
AP004550.1-201ENST00000532652 A0A1B0GUL6 1792 aa16.42■□□□□ 0.22
AP004550.1-201ENST00000532652 HOXB7P09629 217 aa16.42■□□□□ 0.22
AP004550.1-201ENST00000532652 USP17L8P0C7I0 530 aa16.42■□□□□ 0.22
AP004550.1-201ENST00000532652 ZBTB38Q8NAP3 1195 aaPredicted RBP16.42■□□□□ 0.22
AP004550.1-201ENST00000532652 HYPKQ9NX55 129 aa16.42■□□□□ 0.22
AP004550.1-201ENST00000532652 TRIOBPQ9H2D6 2365 aa16.41■□□□□ 0.22
AP004550.1-201ENST00000532652 PRAMEF18Q5VWM3 479 aa16.41■□□□□ 0.22
AP004550.1-201ENST00000532652 CCDC146Q8IYE0 955 aa16.41■□□□□ 0.22
AP004550.1-201ENST00000532652 USP17L3A6NCW0 530 aa16.4■□□□□ 0.22
AP004550.1-201ENST00000532652 USP17L4A6NCW7 530 aa16.4■□□□□ 0.22
AP004550.1-201ENST00000532652 TM4SF4P48230 202 aa16.4■□□□□ 0.22
AP004550.1-201ENST00000532652 TTLL12Q14166 644 aaPredicted RBP16.4■□□□□ 0.22
AP004550.1-201ENST00000532652 CCDC152Q4G0S7 254 aa16.4■□□□□ 0.22
AP004550.1-201ENST00000532652 USP17L1Q7RTZ2 530 aa16.4■□□□□ 0.22
AP004550.1-201ENST00000532652 RIC3Q7Z5B4 369 aa16.4■□□□□ 0.22
AP004550.1-201ENST00000532652 CCDC85AQ96PX6 553 aaPredicted RBP16.4■□□□□ 0.22
AP004550.1-201ENST00000532652 TRIM35Q9UPQ4 493 aa16.4■□□□□ 0.22
AP004550.1-201ENST00000532652 XDHP47989 1333 aa16.4■□□□□ 0.22
AP004550.1-201ENST00000532652 GPR25O00155 361 aa16.39■□□□□ 0.21
AP004550.1-201ENST00000532652 HSP90B1P14625 803 aaKnown RBP16.39■□□□□ 0.21
AP004550.1-201ENST00000532652 NBPF9Q3BBW0 867 aa16.39■□□□□ 0.21
AP004550.1-201ENST00000532652 FBXO46Q6PJ61 603 aaPredicted RBP16.39■□□□□ 0.21
AP004550.1-201ENST00000532652 OTOFQ9HC10 1997 aa16.38■□□□□ 0.21
AP004550.1-201ENST00000532652 PDE8AO60658 829 aa16.38■□□□□ 0.21
AP004550.1-201ENST00000532652 GOLGA2Q08379 1002 aa16.38■□□□□ 0.21
AP004550.1-201ENST00000532652 MKRN3Q13064 507 aaKnown RBP16.38■□□□□ 0.21
AP004550.1-201ENST00000532652 NOM1Q5C9Z4 860 aaKnown RBP16.38■□□□□ 0.21
AP004550.1-201ENST00000532652 DUSP27Q5VZP5 1158 aa16.38■□□□□ 0.21
AP004550.1-201ENST00000532652 PODNQ7Z5L7 613 aa16.38■□□□□ 0.21
AP004550.1-201ENST00000532652 JARID2Q92833 1246 aaPredicted RBP16.38■□□□□ 0.21
AP004550.1-201ENST00000532652 ATP2B4P23634 1241 aa16.37■□□□□ 0.21
AP004550.1-201ENST00000532652 ANKRD18AQ8IVF6 992 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms