RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 GREM2Q9H772 168 aa20.19■□□□□ 0.82
LDLRAD3-205ENST00000532490 DBNDD1Q9H9R9 158 aa20.19■□□□□ 0.82
LDLRAD3-205ENST00000532490 KCNQ5Q9NR82 932 aa20.18■□□□□ 0.82
LDLRAD3-205ENST00000532490 TMEM88BA6NKF7 163 aa20.17■□□□□ 0.82
LDLRAD3-205ENST00000532490 F6X3S4 739 aa20.17■□□□□ 0.82
LDLRAD3-205ENST00000532490 PSMD14O00487 310 aa20.17■□□□□ 0.82
LDLRAD3-205ENST00000532490 DOK7Q18PE1 504 aa20.17■□□□□ 0.82
LDLRAD3-205ENST00000532490 BEND3Q5T5X7 828 aa20.17■□□□□ 0.82
LDLRAD3-205ENST00000532490 CDC5LQ99459 802 aaKnown RBP20.17■□□□□ 0.82
LDLRAD3-205ENST00000532490 ANKIB1Q9P2G1 1089 aa20.17■□□□□ 0.82
LDLRAD3-205ENST00000532490 GGA1Q9UJY5 639 aa20.17■□□□□ 0.82
LDLRAD3-205ENST00000532490 SCN9AQ15858 1988 aa20.16■□□□□ 0.82
LDLRAD3-205ENST00000532490 ECE2O60344 883 aa20.16■□□□□ 0.82
LDLRAD3-205ENST00000532490 UFL1O94874 794 aa20.16■□□□□ 0.82
LDLRAD3-205ENST00000532490 CSF1RP07333 972 aa20.16■□□□□ 0.82
LDLRAD3-205ENST00000532490 BCL2L13Q9BXK5 485 aa20.16■□□□□ 0.82
LDLRAD3-205ENST00000532490 ZC3H12CQ9C0D7 883 aaKnown RBP20.16■□□□□ 0.82
LDLRAD3-205ENST00000532490 BSDC1Q9NW68 430 aaPredicted RBP20.16■□□□□ 0.82
LDLRAD3-205ENST00000532490 PGAP2Q9UHJ9 254 aa20.16■□□□□ 0.82
LDLRAD3-205ENST00000532490 SHTN1A0MZ66 631 aa20.15■□□□□ 0.82
LDLRAD3-205ENST00000532490 HIRAP54198 1017 aaPredicted RBP20.15■□□□□ 0.82
LDLRAD3-205ENST00000532490 DPF2Q92785 391 aa20.15■□□□□ 0.82
LDLRAD3-205ENST00000532490 MKRN1Q9UHC7 482 aaKnown RBP20.15■□□□□ 0.82
LDLRAD3-205ENST00000532490 CNOT7Q9UIV1 285 aaKnown RBP20.15■□□□□ 0.82
LDLRAD3-205ENST00000532490 MINPP1Q9UNW1 487 aa20.15■□□□□ 0.82
LDLRAD3-205ENST00000532490 ZBTB12Q9Y330 459 aaPredicted RBP20.15■□□□□ 0.82
LDLRAD3-205ENST00000532490 XDHP47989 1333 aa20.15■□□□□ 0.82
LDLRAD3-205ENST00000532490 CNTNAP1P78357 1384 aa20.14■□□□□ 0.81
LDLRAD3-205ENST00000532490 WTIPA6NIX2 430 aaPredicted RBP20.14■□□□□ 0.81
LDLRAD3-205ENST00000532490 FMR1Q06787 632 aaKnown RBP eCLIP20.14■□□□□ 0.81
LDLRAD3-205ENST00000532490 SPEF2Q9C093 1822 aa20.13■□□□□ 0.81
LDLRAD3-205ENST00000532490 ATP2B4P23634 1241 aa20.13■□□□□ 0.81
LDLRAD3-205ENST00000532490 TRPM4Q8TD43 1214 aa20.13■□□□□ 0.81
LDLRAD3-205ENST00000532490 VIL1P09327 827 aaKnown RBP20.12■□□□□ 0.81
LDLRAD3-205ENST00000532490 ITGA6P23229 1130 aa20.12■□□□□ 0.81
LDLRAD3-205ENST00000532490 FAM161AQ3B820 660 aa20.12■□□□□ 0.81
LDLRAD3-205ENST00000532490 MICALL2Q8IY33 904 aa20.12■□□□□ 0.81
LDLRAD3-205ENST00000532490 E9PSI1 815 aa20.11■□□□□ 0.81
LDLRAD3-205ENST00000532490 H7C1D1 291 aa20.11■□□□□ 0.81
LDLRAD3-205ENST00000532490 RPS12P25398 132 aaKnown RBP20.11■□□□□ 0.81
LDLRAD3-205ENST00000532490 FOXO4P98177 505 aa20.11■□□□□ 0.81
LDLRAD3-205ENST00000532490 SLFN5Q08AF3 891 aa20.11■□□□□ 0.81
LDLRAD3-205ENST00000532490 ZC3H15Q8WU90 426 aaKnown RBP20.11■□□□□ 0.81
LDLRAD3-205ENST00000532490 TRPM7Q96QT4 1865 aa20.1■□□□□ 0.81
LDLRAD3-205ENST00000532490 CCER2I3L3R5 266 aa20.1■□□□□ 0.81
LDLRAD3-205ENST00000532490 TRAF5O00463 557 aa20.1■□□□□ 0.81
LDLRAD3-205ENST00000532490 CST9Q5W186 159 aa20.1■□□□□ 0.81
LDLRAD3-205ENST00000532490 PSME4Q14997 1843 aa20.1■□□□□ 0.81
LDLRAD3-205ENST00000532490 RASSF10A6NK89 507 aa20.09■□□□□ 0.81
LDLRAD3-205ENST00000532490 IGHMBP2P38935 993 aaKnown RBP20.09■□□□□ 0.81
LDLRAD3-205ENST00000532490 CCT4P50991 539 aaKnown RBP20.09■□□□□ 0.81
LDLRAD3-205ENST00000532490 SAMD7Q7Z3H4 446 aa20.09■□□□□ 0.81
LDLRAD3-205ENST00000532490 MRPL50Q8N5N7 158 aaKnown RBP20.09■□□□□ 0.81
LDLRAD3-205ENST00000532490 ZNF609O15014 1411 aa20.09■□□□□ 0.81
LDLRAD3-205ENST00000532490 MED23Q9ULK4 1368 aa20.08■□□□□ 0.81
LDLRAD3-205ENST00000532490 ALDH1L1O75891 902 aa20.08■□□□□ 0.81
LDLRAD3-205ENST00000532490 EGFRP00533 1210 aa20.08■□□□□ 0.81
LDLRAD3-205ENST00000532490 VEGFBP49765 207 aa20.08■□□□□ 0.81
LDLRAD3-205ENST00000532490 EPHA10Q5JZY3 1008 aa20.08■□□□□ 0.81
LDLRAD3-205ENST00000532490 PODNQ7Z5L7 613 aa20.08■□□□□ 0.81
LDLRAD3-205ENST00000532490 GRM8O00222 908 aa20.07■□□□□ 0.8
LDLRAD3-205ENST00000532490 HSPA1AP0DMV8 641 aaKnown RBP20.07■□□□□ 0.8
LDLRAD3-205ENST00000532490 HSPA1BP0DMV9 641 aaKnown RBP20.07■□□□□ 0.8
LDLRAD3-205ENST00000532490 TRMT2AQ8IZ69 625 aaKnown RBP20.07■□□□□ 0.8
LDLRAD3-205ENST00000532490 CDCA7LQ96GN5 454 aa20.07■□□□□ 0.8
LDLRAD3-205ENST00000532490 GLIS2Q9BZE0 524 aaPredicted RBP20.07■□□□□ 0.8
LDLRAD3-205ENST00000532490 LEMD3Q9Y2U8 911 aa20.07■□□□□ 0.8
LDLRAD3-205ENST00000532490 G3V3G9 751 aa20.06■□□□□ 0.8
LDLRAD3-205ENST00000532490 DEFB115Q30KQ5 88 aa20.06■□□□□ 0.8
LDLRAD3-205ENST00000532490 TBC1D10BQ4KMP7 808 aaPredicted RBP20.06■□□□□ 0.8
LDLRAD3-205ENST00000532490 DCAF8Q5TAQ9 597 aa20.06■□□□□ 0.8
LDLRAD3-205ENST00000532490 TXNRD3Q86VQ6 643 aa20.06■□□□□ 0.8
LDLRAD3-205ENST00000532490 GMLQ99445 158 aa20.06■□□□□ 0.8
LDLRAD3-205ENST00000532490 SRCIN1Q9C0H9 1055 aa20.06■□□□□ 0.8
LDLRAD3-205ENST00000532490 ANKRD18BA2A2Z9 1011 aa20.05■□□□□ 0.8
LDLRAD3-205ENST00000532490 RSBN1LQ6PCB5 846 aaPredicted RBP20.05■□□□□ 0.8
LDLRAD3-205ENST00000532490 SLC4A10Q6U841 1118 aa20.05■□□□□ 0.8
LDLRAD3-205ENST00000532490 CDC37L1Q7L3B6 337 aa20.05■□□□□ 0.8
LDLRAD3-205ENST00000532490 AGBL3Q8NEM8 1001 aa20.05■□□□□ 0.8
LDLRAD3-205ENST00000532490 SSH1Q8WYL5 1049 aa20.05■□□□□ 0.8
LDLRAD3-205ENST00000532490 MPHOSPH8Q99549 860 aa20.05■□□□□ 0.8
LDLRAD3-205ENST00000532490 ANKRD2Q9GZV1 360 aa20.05■□□□□ 0.8
LDLRAD3-205ENST00000532490 POLR2AP24928 1970 aaKnown RBP20.04■□□□□ 0.8
LDLRAD3-205ENST00000532490 ZNF646O15015 1829 aaPredicted RBP20.04■□□□□ 0.8
LDLRAD3-205ENST00000532490 ZNF280AP59817 542 aaPredicted RBP20.04■□□□□ 0.8
LDLRAD3-205ENST00000532490 CHRNDQ07001 517 aa20.04■□□□□ 0.8
LDLRAD3-205ENST00000532490 IFFO2Q5TF58 517 aa20.04■□□□□ 0.8
LDLRAD3-205ENST00000532490 LMBR1LQ6UX01 489 aa20.04■□□□□ 0.8
LDLRAD3-205ENST00000532490 KAZALD1Q96I82 304 aa20.04■□□□□ 0.8
LDLRAD3-205ENST00000532490 C9orf78Q9NZ63 289 aaPredicted RBP20.04■□□□□ 0.8
LDLRAD3-205ENST00000532490 ABT1Q9ULW3 272 aaKnown RBP20.04■□□□□ 0.8
LDLRAD3-205ENST00000532490 ZNF804BA4D1E1 1349 aa20.03■□□□□ 0.8
LDLRAD3-205ENST00000532490 UTYO14607 1347 aa20.03■□□□□ 0.8
LDLRAD3-205ENST00000532490 USP17L3A6NCW0 530 aa20.03■□□□□ 0.8
LDLRAD3-205ENST00000532490 USP17L4A6NCW7 530 aa20.03■□□□□ 0.8
LDLRAD3-205ENST00000532490 KLRK1P26718 216 aa20.03■□□□□ 0.8
LDLRAD3-205ENST00000532490 IFIT5Q13325 482 aaKnown RBP20.03■□□□□ 0.8
LDLRAD3-205ENST00000532490 USP17L1Q7RTZ2 530 aa20.03■□□□□ 0.8
LDLRAD3-205ENST00000532490 TLL2Q9Y6L7 1015 aa20.03■□□□□ 0.8
LDLRAD3-205ENST00000532490 IRS2Q9Y4H2 1338 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms