RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 NOM1Q5C9Z4 860 aaKnown RBP13.08□□□□□ -0.32
PTPRK-221ENST00000532331 SH2D4AQ9H788 454 aa13.08□□□□□ -0.32
PTPRK-221ENST00000532331 PAG1Q9NWQ8 432 aa13.08□□□□□ -0.32
PTPRK-221ENST00000532331 MBD5Q9P267 1494 aa13.08□□□□□ -0.32
PTPRK-221ENST00000532331 TRMT1LQ7Z2T5 733 aaKnown RBP13.07□□□□□ -0.32
PTPRK-221ENST00000532331 MICU3Q86XE3 530 aa13.07□□□□□ -0.32
PTPRK-221ENST00000532331 MAGEB6Q8N7X4 407 aa13.07□□□□□ -0.32
PTPRK-221ENST00000532331 LIG1P18858 919 aa13.07□□□□□ -0.32
PTPRK-221ENST00000532331 TCIRG1Q13488 830 aa13.07□□□□□ -0.32
PTPRK-221ENST00000532331 GRPEL1Q9HAV7 217 aa13.07□□□□□ -0.32
PTPRK-221ENST00000532331 TMOD4Q9NZQ9 345 aa13.07□□□□□ -0.32
PTPRK-221ENST00000532331 HMG20BQ9P0W2 317 aa13.07□□□□□ -0.32
PTPRK-221ENST00000532331 METAP2P50579 478 aaKnown RBP eCLIP13.07□□□□□ -0.32
PTPRK-221ENST00000532331 MTERF4Q7Z6M4 381 aaKnown RBP13.07□□□□□ -0.32
PTPRK-221ENST00000532331 BICC1Q9H694 974 aaKnown RBP13.07□□□□□ -0.32
PTPRK-221ENST00000532331 ERLIN2O94905 339 aa13.07□□□□□ -0.32
PTPRK-221ENST00000532331 MCM5P33992 734 aa13.07□□□□□ -0.32
PTPRK-221ENST00000532331 CCT2P78371 535 aaKnown RBP13.07□□□□□ -0.32
PTPRK-221ENST00000532331 TSHZ3Q63HK5 1081 aa13.07□□□□□ -0.32
PTPRK-221ENST00000532331 TMTC2Q8N394 836 aa13.07□□□□□ -0.32
PTPRK-221ENST00000532331 ZNF496Q96IT1 587 aaPredicted RBP13.07□□□□□ -0.32
PTPRK-221ENST00000532331 UBA5Q9GZZ9 404 aa13.07□□□□□ -0.32
PTPRK-221ENST00000532331 USP16Q9Y5T5 823 aa13.07□□□□□ -0.32
PTPRK-221ENST00000532331 GNAQP50148 359 aa13.06□□□□□ -0.32
PTPRK-221ENST00000532331 TFCP2Q12800 502 aa13.06□□□□□ -0.32
PTPRK-221ENST00000532331 MAP3K11Q16584 847 aa13.06□□□□□ -0.32
PTPRK-221ENST00000532331 MIGA1Q8NAN2 632 aa13.06□□□□□ -0.32
PTPRK-221ENST00000532331 FBXO3Q9UK99 471 aa13.06□□□□□ -0.32
PTPRK-221ENST00000532331 TSPYL6Q8N831 410 aa13.06□□□□□ -0.32
PTPRK-221ENST00000532331 PARD3Q8TEW0 1356 aa13.06□□□□□ -0.32
PTPRK-221ENST00000532331 PUM3Q15397 648 aaKnown RBP13.06□□□□□ -0.32
PTPRK-221ENST00000532331 NEK1Q96PY6 1258 aa13.06□□□□□ -0.32
PTPRK-221ENST00000532331 VAMP4O75379 141 aa13.06□□□□□ -0.32
PTPRK-221ENST00000532331 FERMT3Q86UX7 667 aa13.06□□□□□ -0.32
PTPRK-221ENST00000532331 TEX11Q8IYF3 940 aa13.06□□□□□ -0.32
PTPRK-221ENST00000532331 AFF2P51816 1311 aa13.05□□□□□ -0.32
PTPRK-221ENST00000532331 CCDC181Q5TID7 509 aa13.05□□□□□ -0.32
PTPRK-221ENST00000532331 BRINP3Q76B58 766 aa13.05□□□□□ -0.32
PTPRK-221ENST00000532331 CKAP2LQ8IYA6 745 aa13.05□□□□□ -0.32
PTPRK-221ENST00000532331 CNKSR1Q969H4 720 aa13.05□□□□□ -0.32
PTPRK-221ENST00000532331 PLXNC1O60486 1568 aa13.05□□□□□ -0.32
PTPRK-221ENST00000532331 LOC102724428A0A0B4J2F2 783 aa13.05□□□□□ -0.32
PTPRK-221ENST00000532331 SIK1P57059 783 aa13.05□□□□□ -0.32
PTPRK-221ENST00000532331 MCMDC2Q4G0Z9 681 aa13.05□□□□□ -0.32
PTPRK-221ENST00000532331 FAM182BQ5T319 152 aa13.05□□□□□ -0.32
PTPRK-221ENST00000532331 SCAND2PQ9GZW5 306 aaPredicted RBP13.05□□□□□ -0.32
PTPRK-221ENST00000532331 SEPT11Q9NVA2 429 aaKnown RBP13.05□□□□□ -0.32
PTPRK-221ENST00000532331 ANKRD44Q8N8A2 993 aa13.05□□□□□ -0.32
PTPRK-221ENST00000532331 SMARCC2Q8TAQ2 1214 aa13.05□□□□□ -0.32
PTPRK-221ENST00000532331 WDR66Q8TBY9 1149 aa13.04□□□□□ -0.32
PTPRK-221ENST00000532331 GUCY1B3Q02153 619 aa13.04□□□□□ -0.32
PTPRK-221ENST00000532331 LIMCH1Q9UPQ0 1083 aa13.04□□□□□ -0.32
PTPRK-221ENST00000532331 POTEJP0CG39 1038 aa13.04□□□□□ -0.32
PTPRK-221ENST00000532331 CCDC150Q8NCX0 1101 aa13.04□□□□□ -0.32
PTPRK-221ENST00000532331 TSG101Q99816 390 aa13.04□□□□□ -0.32
PTPRK-221ENST00000532331 SLC26A6Q9BXS9 759 aa13.04□□□□□ -0.32
PTPRK-221ENST00000532331 THRAP3Q9Y2W1 955 aaKnown RBP13.04□□□□□ -0.32
PTPRK-221ENST00000532331 WDR17Q8IZU2 1322 aa13.04□□□□□ -0.32
PTPRK-221ENST00000532331 EIF5P55010 431 aaKnown RBP13.03□□□□□ -0.32
PTPRK-221ENST00000532331 CALML4Q96GE6 196 aa13.03□□□□□ -0.32
PTPRK-221ENST00000532331 MAP7D2Q96T17 732 aa13.03□□□□□ -0.32
PTPRK-221ENST00000532331 TCP11L1Q9NUJ3 509 aa13.03□□□□□ -0.32
PTPRK-221ENST00000532331 ROBO2Q9HCK4 1378 aa13.03□□□□□ -0.32
PTPRK-221ENST00000532331 EYA2O00167 538 aa13.03□□□□□ -0.32
PTPRK-221ENST00000532331 NEBLO76041 1014 aa13.03□□□□□ -0.32
PTPRK-221ENST00000532331 PREX2Q70Z35 1606 aa13.03□□□□□ -0.32
PTPRK-221ENST00000532331 RNF113AO15541 343 aaKnown RBP13.03□□□□□ -0.32
PTPRK-221ENST00000532331 KIF20AO95235 890 aa13.03□□□□□ -0.32
PTPRK-221ENST00000532331 PRKG1Q13976 671 aa13.03□□□□□ -0.32
PTPRK-221ENST00000532331 DLGAP5Q15398 846 aa13.03□□□□□ -0.32
PTPRK-221ENST00000532331 DRC1Q96MC2 740 aa13.03□□□□□ -0.32
PTPRK-221ENST00000532331 CA8P35219 290 aa13.03□□□□□ -0.32
PTPRK-221ENST00000532331 CCDC148Q8NFR7 591 aa13.03□□□□□ -0.32
PTPRK-221ENST00000532331 RAB3GAP1Q15042 981 aa13.02□□□□□ -0.32
PTPRK-221ENST00000532331 TTC22Q5TAA0 569 aa13.02□□□□□ -0.32
PTPRK-221ENST00000532331 ARHGEF25Q86VW2 580 aa13.02□□□□□ -0.32
PTPRK-221ENST00000532331 INSRP06213 1382 aa13.02□□□□□ -0.33
PTPRK-221ENST00000532331 SKIDA1Q1XH10 827 aa13.02□□□□□ -0.33
PTPRK-221ENST00000532331 RAB11FIP4Q86YS3 637 aa13.02□□□□□ -0.33
PTPRK-221ENST00000532331 CCDC112Q8NEF3 446 aa13.02□□□□□ -0.33
PTPRK-221ENST00000532331 USPL1Q5W0Q7 1092 aa13.01□□□□□ -0.33
PTPRK-221ENST00000532331 HEATR3Q7Z4Q2 680 aa13.01□□□□□ -0.33
PTPRK-221ENST00000532331 ZBTB43O43298 467 aa13.01□□□□□ -0.33
PTPRK-221ENST00000532331 RBM6P78332 1123 aaKnown RBP13.01□□□□□ -0.33
PTPRK-221ENST00000532331 FILIP1Q7Z7B0 1213 aa13.01□□□□□ -0.33
PTPRK-221ENST00000532331 SAP30BPQ9UHR5 308 aaKnown RBP13.01□□□□□ -0.33
PTPRK-221ENST00000532331 ATF5Q9Y2D1 282 aaPredicted RBP13.01□□□□□ -0.33
PTPRK-221ENST00000532331 IVNS1ABPQ9Y6Y0 642 aa13.01□□□□□ -0.33
PTPRK-221ENST00000532331 CFAP100Q494V2 611 aa13.01□□□□□ -0.33
PTPRK-221ENST00000532331 STXBP4Q6ZWJ1 553 aa13.01□□□□□ -0.33
PTPRK-221ENST00000532331 CERS3Q8IU89 383 aa13.01□□□□□ -0.33
PTPRK-221ENST00000532331 ORC3Q9UBD5 711 aaPredicted RBP13.01□□□□□ -0.33
PTPRK-221ENST00000532331 RPS8P62241 208 aaKnown RBP13.01□□□□□ -0.33
PTPRK-221ENST00000532331 CAMK4Q16566 473 aa13.01□□□□□ -0.33
PTPRK-221ENST00000532331 BMP2KLQ5H9B9 411 aa13.01□□□□□ -0.33
PTPRK-221ENST00000532331 ERMNQ8TAM6 284 aa13.01□□□□□ -0.33
PTPRK-221ENST00000532331 ARHGEF10LQ9HCE6 1279 aa13.01□□□□□ -0.33
PTPRK-221ENST00000532331 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.01□□□□□ -0.331e-9■■□□□ 13.6
PTPRK-221ENST00000532331 EPB41L2O43491 1005 aaKnown RBP13.01□□□□□ -0.33
PTPRK-221ENST00000532331 ZNF397Q8NF99 534 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms