RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 CELF1Q92879 486 aaKnown RBP10.29□□□□□ -0.76
NXF1-212ENST00000531872 EYA3Q99504 573 aa10.29□□□□□ -0.76
NXF1-212ENST00000531872 HDAC9Q9UKV0 1011 aa10.29□□□□□ -0.76
NXF1-212ENST00000531872 ZNF609O15014 1411 aa10.29□□□□□ -0.76
NXF1-212ENST00000531872 DDX60Q8IY21 1712 aaKnown RBP10.29□□□□□ -0.76
NXF1-212ENST00000531872 PAPPA2Q9BXP8 1791 aa10.29□□□□□ -0.76
NXF1-212ENST00000531872 C6orf229H3BNL8 230 aa10.28□□□□□ -0.76
NXF1-212ENST00000531872 TBC1D8O95759 1140 aa10.28□□□□□ -0.76
NXF1-212ENST00000531872 NEFMP07197 916 aa10.28□□□□□ -0.76
NXF1-212ENST00000531872 ZNF280AP59817 542 aaPredicted RBP10.28□□□□□ -0.76
NXF1-212ENST00000531872 DOK7Q18PE1 504 aa10.28□□□□□ -0.76
NXF1-212ENST00000531872 NCBP3Q53F19 620 aaKnown RBP10.28□□□□□ -0.76
NXF1-212ENST00000531872 FBXO46Q6PJ61 603 aaPredicted RBP10.28□□□□□ -0.76
NXF1-212ENST00000531872 TBC1D16Q8TBP0 767 aa10.28□□□□□ -0.76
NXF1-212ENST00000531872 XAGE3Q8WTP9 111 aa10.28□□□□□ -0.76
NXF1-212ENST00000531872 TSPYL4Q9UJ04 414 aa10.28□□□□□ -0.76
NXF1-212ENST00000531872 SCN9AQ15858 1988 aa10.28□□□□□ -0.76
NXF1-212ENST00000531872 COL4A1P02462 1669 aa10.28□□□□□ -0.76
NXF1-212ENST00000531872 HTTP42858 3142 aa10.27□□□□□ -0.76
NXF1-212ENST00000531872 BRCA2P51587 3418 aa10.27□□□□□ -0.77
NXF1-212ENST00000531872 GPR25O00155 361 aa10.27□□□□□ -0.77
NXF1-212ENST00000531872 TM4SF4P48230 202 aa10.27□□□□□ -0.77
NXF1-212ENST00000531872 AIMP1Q12904 312 aaKnown RBP10.27□□□□□ -0.77
NXF1-212ENST00000531872 SCARF1Q14162 830 aa10.27□□□□□ -0.77
NXF1-212ENST00000531872 ANGEL2Q5VTE6 544 aaKnown RBP10.27□□□□□ -0.77
NXF1-212ENST00000531872 CFHR5Q9BXR6 569 aa10.27□□□□□ -0.77
NXF1-212ENST00000531872 BABAM1Q9NWV8 329 aa10.27□□□□□ -0.77
NXF1-212ENST00000531872 PODXL2Q9NZ53 605 aa10.27□□□□□ -0.77
NXF1-212ENST00000531872 PITPNM2Q9BZ72 1349 aa10.27□□□□□ -0.77
NXF1-212ENST00000531872 HABP4Q5JVS0 413 aaKnown RBP10.26□□□□□ -0.77
NXF1-212ENST00000531872 MOB2Q70IA6 237 aa10.26□□□□□ -0.77
NXF1-212ENST00000531872 AGBL3Q8NEM8 1001 aa10.26□□□□□ -0.77
NXF1-212ENST00000531872 NECTIN2Q92692 538 aa10.26□□□□□ -0.77
NXF1-212ENST00000531872 GMLQ99445 158 aa10.26□□□□□ -0.77
NXF1-212ENST00000531872 ZC3H12CQ9C0D7 883 aaKnown RBP10.26□□□□□ -0.77
NXF1-212ENST00000531872 CENPFP49454 3210 aa10.26□□□□□ -0.77
NXF1-212ENST00000531872 RPS8P62241 208 aaKnown RBP10.25□□□□□ -0.77
NXF1-212ENST00000531872 RSBN1LQ6PCB5 846 aaPredicted RBP10.25□□□□□ -0.77
NXF1-212ENST00000531872 FAM89AQ96GI7 184 aa10.25□□□□□ -0.77
NXF1-212ENST00000531872 ISCA1Q9BUE6 129 aa10.25□□□□□ -0.77
NXF1-212ENST00000531872 UBE2Q2LH0YL09 131 aa10.24□□□□□ -0.77
NXF1-212ENST00000531872 MYOZ2Q9NPC6 264 aa10.24□□□□□ -0.77
NXF1-212ENST00000531872 PSME4Q14997 1843 aa10.23□□□□□ -0.77
NXF1-212ENST00000531872 FKTNO75072 461 aa10.23□□□□□ -0.77
NXF1-212ENST00000531872 USP17L8P0C7I0 530 aa10.23□□□□□ -0.77
NXF1-212ENST00000531872 PLBD2Q8NHP8 589 aa10.23□□□□□ -0.77
NXF1-212ENST00000531872 CCER1Q8TC90 406 aaPredicted RBP10.23□□□□□ -0.77
NXF1-212ENST00000531872 ZNF428Q96B54 188 aa10.23□□□□□ -0.77
NXF1-212ENST00000531872 PNNQ9H307 717 aaKnown RBP10.23□□□□□ -0.77
NXF1-212ENST00000531872 R3HDMLQ9H3Y0 253 aa10.23□□□□□ -0.77
NXF1-212ENST00000531872 UFL1O94874 794 aa10.22□□□□□ -0.77
NXF1-212ENST00000531872 SREBF2Q12772 1141 aa10.22□□□□□ -0.77
NXF1-212ENST00000531872 TRIM28Q13263 835 aaKnown RBP10.22□□□□□ -0.77
NXF1-212ENST00000531872 ANKRD13DQ6ZTN6 518 aa10.22□□□□□ -0.77
NXF1-212ENST00000531872 GGA1Q9UJY5 639 aa10.22□□□□□ -0.77
NXF1-212ENST00000531872 SCAF8Q9UPN6 1271 aaKnown RBP10.22□□□□□ -0.77
NXF1-212ENST00000531872 MAPK8IP3Q9UPT6 1336 aa10.22□□□□□ -0.77
NXF1-212ENST00000531872 POTEFA5A3E0 1075 aa10.21□□□□□ -0.77
NXF1-212ENST00000531872 ATP5J2-PTCD1G3V325 749 aa10.21□□□□□ -0.77
NXF1-212ENST00000531872 G3V3G9 751 aa10.21□□□□□ -0.77
NXF1-212ENST00000531872 IRS4O14654 1257 aaPredicted RBP10.21□□□□□ -0.77
NXF1-212ENST00000531872 RIPK4P57078 832 aa10.21□□□□□ -0.77
NXF1-212ENST00000531872 NBPF9Q3BBW0 867 aa10.21□□□□□ -0.77
NXF1-212ENST00000531872 DCAF8Q5TAQ9 597 aa10.21□□□□□ -0.77
NXF1-212ENST00000531872 PRAMEF18Q5VWM3 479 aa10.21□□□□□ -0.77
NXF1-212ENST00000531872 INTS3Q68E01 1043 aaKnown RBP10.21□□□□□ -0.77
NXF1-212ENST00000531872 PODNQ7Z5L7 613 aa10.21□□□□□ -0.77
NXF1-212ENST00000531872 SEC31BQ9NQW1 1179 aa10.21□□□□□ -0.77
NXF1-212ENST00000531872 CHPF2Q9P2E5 772 aa10.21□□□□□ -0.77
NXF1-212ENST00000531872 ANKIB1Q9P2G1 1089 aa10.21□□□□□ -0.77
NXF1-212ENST00000531872 SZT2Q5T011 3432 aa10.2□□□□□ -0.78
NXF1-212ENST00000531872 USP17L3A6NCW0 530 aa10.2□□□□□ -0.78
NXF1-212ENST00000531872 USP17L4A6NCW7 530 aa10.2□□□□□ -0.78
NXF1-212ENST00000531872 FXR1P51114 621 aaKnown RBP eCLIP10.2□□□□□ -0.78
NXF1-212ENST00000531872 PTPN12Q05209 780 aaKnown RBP10.2□□□□□ -0.78
NXF1-212ENST00000531872 MKRN3Q13064 507 aaKnown RBP10.2□□□□□ -0.78
NXF1-212ENST00000531872 KRT24Q2M2I5 525 aa10.2□□□□□ -0.78
NXF1-212ENST00000531872 RTL5Q5HYW3 569 aaPredicted RBP10.2□□□□□ -0.78
NXF1-212ENST00000531872 USP17L1Q7RTZ2 530 aa10.2□□□□□ -0.78
NXF1-212ENST00000531872 RBBP6Q7Z6E9 1792 aaKnown RBP10.19□□□□□ -0.78
NXF1-212ENST00000531872 CHL1O00533 1208 aa10.19□□□□□ -0.78
NXF1-212ENST00000531872 WNT10BO00744 389 aa10.19□□□□□ -0.78
NXF1-212ENST00000531872 ALDH1A1P00352 501 aa10.19□□□□□ -0.78
NXF1-212ENST00000531872 NF2P35240 595 aa10.19□□□□□ -0.78
NXF1-212ENST00000531872 TTLL12Q14166 644 aaPredicted RBP10.19□□□□□ -0.78
NXF1-212ENST00000531872 LDLRAD1Q5T700 205 aa10.19□□□□□ -0.78
NXF1-212ENST00000531872 SPRYD7Q5W111 196 aa10.19□□□□□ -0.78
NXF1-212ENST00000531872 OTOP1Q7RTM1 612 aa10.19□□□□□ -0.78
NXF1-212ENST00000531872 ZBTB38Q8NAP3 1195 aaPredicted RBP10.19□□□□□ -0.78
NXF1-212ENST00000531872 TRIM17Q9Y577 477 aa10.19□□□□□ -0.78
NXF1-212ENST00000531872 KIAA0100Q14667 2235 aaKnown RBP10.19□□□□□ -0.78
NXF1-212ENST00000531872 XDHP47989 1333 aa10.18□□□□□ -0.78
NXF1-212ENST00000531872 HOXB7P09629 217 aa10.18□□□□□ -0.78
NXF1-212ENST00000531872 HSP90B1P14625 803 aaKnown RBP10.18□□□□□ -0.78
NXF1-212ENST00000531872 ATP2B4P23634 1241 aa10.18□□□□□ -0.78
NXF1-212ENST00000531872 TMPOP42166 694 aaKnown RBP10.18□□□□□ -0.78
NXF1-212ENST00000531872 INHBEP58166 350 aa10.18□□□□□ -0.78
NXF1-212ENST00000531872 LMOD3Q0VAK6 560 aa10.18□□□□□ -0.78
NXF1-212ENST00000531872 DACT2Q5SW24 774 aa10.18□□□□□ -0.78
NXF1-212ENST00000531872 HDGFL1Q5TGJ6 251 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms