RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 PODXL2Q9NZ53 605 aa18.24■□□□□ 0.51
FOXR1-202ENST00000531539 RTL9Q8NET4 1388 aa18.24■□□□□ 0.51
FOXR1-202ENST00000531539 G3V3G9 751 aa18.23■□□□□ 0.51
FOXR1-202ENST00000531539 CCT4P50991 539 aaKnown RBP18.23■□□□□ 0.51
FOXR1-202ENST00000531539 DOK7Q18PE1 504 aa18.23■□□□□ 0.51
FOXR1-202ENST00000531539 CCDC57Q2TAC2 916 aa18.23■□□□□ 0.51
FOXR1-202ENST00000531539 DCAF8Q5TAQ9 597 aa18.23■□□□□ 0.51
FOXR1-202ENST00000531539 GPC2Q8N158 579 aa18.23■□□□□ 0.51
FOXR1-202ENST00000531539 ARHGAP45Q92619 1136 aa18.23■□□□□ 0.51
FOXR1-202ENST00000531539 UTYO14607 1347 aa18.23■□□□□ 0.51
FOXR1-202ENST00000531539 WTIPA6NIX2 430 aaPredicted RBP18.22■□□□□ 0.51
FOXR1-202ENST00000531539 RAD17O75943 681 aa18.22■□□□□ 0.51
FOXR1-202ENST00000531539 ATP2B4P23634 1241 aa18.22■□□□□ 0.51
FOXR1-202ENST00000531539 CXCL9Q07325 125 aa18.22■□□□□ 0.51
FOXR1-202ENST00000531539 TAF7LQ5H9L4 462 aa18.22■□□□□ 0.51
FOXR1-202ENST00000531539 KAZALD1Q96I82 304 aa18.22■□□□□ 0.51
FOXR1-202ENST00000531539 ZNF594Q96JF6 807 aaPredicted RBP18.22■□□□□ 0.51
FOXR1-202ENST00000531539 TIAM2Q8IVF5 1701 aa18.22■□□□□ 0.51
FOXR1-202ENST00000531539 XDHP47989 1333 aa18.22■□□□□ 0.51
FOXR1-202ENST00000531539 RBM46Q8TBY0 533 aaKnown RBP18.21■□□□□ 0.51
FOXR1-202ENST00000531539 L3MBTL3Q96JM7 780 aaPredicted RBP18.21■□□□□ 0.51
FOXR1-202ENST00000531539 DBNDD1Q9H9R9 158 aa18.21■□□□□ 0.51
FOXR1-202ENST00000531539 COL4A5P29400 1685 aa18.21■□□□□ 0.51
FOXR1-202ENST00000531539 KIF16BQ96L93 1317 aa18.21■□□□□ 0.51
FOXR1-202ENST00000531539 IQCA1LA6NCM1 817 aa18.2■□□□□ 0.5
FOXR1-202ENST00000531539 TNIP1Q15025 636 aa18.2■□□□□ 0.5
FOXR1-202ENST00000531539 CIAPIN1Q6FI81 312 aa18.2■□□□□ 0.5
FOXR1-202ENST00000531539 ANKRD2Q9GZV1 360 aa18.2■□□□□ 0.5
FOXR1-202ENST00000531539 BICC1Q9H694 974 aaKnown RBP18.2■□□□□ 0.5
FOXR1-202ENST00000531539 HACL1Q9UJ83 578 aa18.2■□□□□ 0.5
FOXR1-202ENST00000531539 YDJCA8MPS7 323 aa18.19■□□□□ 0.5
FOXR1-202ENST00000531539 LDHAL6AQ6ZMR3 332 aa18.19■□□□□ 0.5
FOXR1-202ENST00000531539 HELBQ8NG08 1087 aaPredicted RBP18.19■□□□□ 0.5
FOXR1-202ENST00000531539 CLUAP1Q96AJ1 413 aa18.19■□□□□ 0.5
FOXR1-202ENST00000531539 TNNQ9UQP3 1299 aa18.19■□□□□ 0.5
FOXR1-202ENST00000531539 PLIN1O60240 522 aa18.18■□□□□ 0.5
FOXR1-202ENST00000531539 ECE2O60344 883 aa18.18■□□□□ 0.5
FOXR1-202ENST00000531539 CHRNDQ07001 517 aa18.18■□□□□ 0.5
FOXR1-202ENST00000531539 ATF7IPQ6VMQ6 1270 aa18.18■□□□□ 0.5
FOXR1-202ENST00000531539 ANKRD44Q8N8A2 993 aa18.18■□□□□ 0.5
FOXR1-202ENST00000531539 TAF1DQ9H5J8 278 aaPredicted RBP18.18■□□□□ 0.5
FOXR1-202ENST00000531539 KCNQ5Q9NR82 932 aa18.18■□□□□ 0.5
FOXR1-202ENST00000531539 CNNM1Q9NRU3 951 aa18.18■□□□□ 0.5
FOXR1-202ENST00000531539 MYH3P11055 1940 aa18.17■□□□□ 0.5
FOXR1-202ENST00000531539 TAF5LO75529 589 aa18.17■□□□□ 0.5
FOXR1-202ENST00000531539 UBTFL1P0CB47 393 aaPredicted RBP18.17■□□□□ 0.5
FOXR1-202ENST00000531539 LMOD1P29536 600 aaPredicted RBP18.17■□□□□ 0.5
FOXR1-202ENST00000531539 EPS15P42566 896 aa18.17■□□□□ 0.5
FOXR1-202ENST00000531539 EAPPQ56P03 285 aaPredicted RBP18.17■□□□□ 0.5
FOXR1-202ENST00000531539 ZKSCAN2Q63HK3 967 aa18.17■□□□□ 0.5
FOXR1-202ENST00000531539 INTS3Q68E01 1043 aaKnown RBP18.17■□□□□ 0.5
FOXR1-202ENST00000531539 SMC1BQ8NDV3 1235 aa18.17■□□□□ 0.5
FOXR1-202ENST00000531539 CLEC11AQ9Y240 323 aa18.17■□□□□ 0.5
FOXR1-202ENST00000531539 LEMD3Q9Y2U8 911 aa18.17■□□□□ 0.5
FOXR1-202ENST00000531539 POTEIP0CG38 1075 aa18.16■□□□□ 0.5
FOXR1-202ENST00000531539 POTEJP0CG39 1038 aa18.16■□□□□ 0.5
FOXR1-202ENST00000531539 TRIM27P14373 513 aa18.16■□□□□ 0.5
FOXR1-202ENST00000531539 EPHX2P34913 555 aa18.16■□□□□ 0.5
FOXR1-202ENST00000531539 KCNJ4P48050 445 aa18.16■□□□□ 0.5
FOXR1-202ENST00000531539 FSTL1Q12841 308 aa18.16■□□□□ 0.5
FOXR1-202ENST00000531539 WDR90Q96KV7 1748 aa18.15■□□□□ 0.5
FOXR1-202ENST00000531539 GMPSP49915 693 aaPredicted RBP18.15■□□□□ 0.5
FOXR1-202ENST00000531539 RABL6Q3YEC7 729 aaPredicted RBP18.15■□□□□ 0.5
FOXR1-202ENST00000531539 PUS3Q9BZE2 481 aaKnown RBP18.15■□□□□ 0.5
FOXR1-202ENST00000531539 HDAC5Q9UQL6 1122 aa18.15■□□□□ 0.5
FOXR1-202ENST00000531539 DUOX1Q9NRD9 1551 aa18.15■□□□□ 0.5
FOXR1-202ENST00000531539 ZNF804BA4D1E1 1349 aa18.15■□□□□ 0.5
FOXR1-202ENST00000531539 LRRC37AA6NMS7 1700 aa18.15■□□□□ 0.5
FOXR1-202ENST00000531539 SNAP23O00161 211 aa18.14■□□□□ 0.49
FOXR1-202ENST00000531539 PSMD14O00487 310 aa18.14■□□□□ 0.49
FOXR1-202ENST00000531539 SCNN1DP51172 638 aa18.14■□□□□ 0.49
FOXR1-202ENST00000531539 ZBTB12Q9Y330 459 aaPredicted RBP18.14■□□□□ 0.49
FOXR1-202ENST00000531539 HSPA6P17066 643 aa18.13■□□□□ 0.49
FOXR1-202ENST00000531539 CHADLQ6NUI6 762 aa18.13■□□□□ 0.49
FOXR1-202ENST00000531539 PNMA8AQ86V59 439 aaPredicted RBP18.13■□□□□ 0.49
FOXR1-202ENST00000531539 TXNRD3Q86VQ6 643 aa18.13■□□□□ 0.49
FOXR1-202ENST00000531539 MEIS3Q99687 375 aa18.13■□□□□ 0.49
FOXR1-202ENST00000531539 GNAI3P08754 354 aa18.12■□□□□ 0.49
FOXR1-202ENST00000531539 PODNQ7Z5L7 613 aa18.12■□□□□ 0.49
FOXR1-202ENST00000531539 KLHDC4Q8TBB5 520 aa18.12■□□□□ 0.49
FOXR1-202ENST00000531539 GPRC5DQ9NZD1 345 aa18.12■□□□□ 0.49
FOXR1-202ENST00000531539 CNOT7Q9UIV1 285 aaKnown RBP18.12■□□□□ 0.49
FOXR1-202ENST00000531539 LRRFIP2Q9Y608 721 aaKnown RBP18.12■□□□□ 0.49
FOXR1-202ENST00000531539 KLRK1P26718 216 aa18.11■□□□□ 0.49
FOXR1-202ENST00000531539 LRRC24Q50LG9 513 aa18.11■□□□□ 0.49
FOXR1-202ENST00000531539 LDHDQ86WU2 507 aa18.11■□□□□ 0.49
FOXR1-202ENST00000531539 TMEM57Q8N5G2 664 aa18.11■□□□□ 0.49
FOXR1-202ENST00000531539 RIPOR2Q9Y4F9 1068 aa18.11■□□□□ 0.49
FOXR1-202ENST00000531539 SPEF2Q9C093 1822 aa18.1■□□□□ 0.49
FOXR1-202ENST00000531539 H7C1D1 291 aa18.1■□□□□ 0.49
FOXR1-202ENST00000531539 VIL1P09327 827 aaKnown RBP18.1■□□□□ 0.49
FOXR1-202ENST00000531539 DZIP1LQ8IYY4 767 aaKnown RBP18.1■□□□□ 0.49
FOXR1-202ENST00000531539 FBXW7Q969H0 707 aa18.1■□□□□ 0.49
FOXR1-202ENST00000531539 COA1Q9GZY4 146 aa18.1■□□□□ 0.49
FOXR1-202ENST00000531539 MED23Q9ULK4 1368 aa18.09■□□□□ 0.49
FOXR1-202ENST00000531539 SHTN1A0MZ66 631 aa18.09■□□□□ 0.49
FOXR1-202ENST00000531539 USP17L3A6NCW0 530 aa18.09■□□□□ 0.49
FOXR1-202ENST00000531539 USP17L4A6NCW7 530 aa18.09■□□□□ 0.49
FOXR1-202ENST00000531539 USP50Q70EL3 339 aaPredicted RBP18.09■□□□□ 0.49
FOXR1-202ENST00000531539 USP17L1Q7RTZ2 530 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms