RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, human

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHMP4A-205	ENST00000531158	HUNK	P57058	714 aa		12.03	□□□□□ -0.48
CHMP4A-205	ENST00000531158	NOG	Q13253	232 aa		12.03	□□□□□ -0.48
CHMP4A-205	ENST00000531158	NEUROD2	Q15784	382 aa		12.03	□□□□□ -0.48
CHMP4A-205	ENST00000531158	DOK7	Q18PE1	504 aa		12.03	□□□□□ -0.48
CHMP4A-205	ENST00000531158	WASHC4	Q2M389	1173 aa		12.03	□□□□□ -0.48
CHMP4A-205	ENST00000531158	RTL5	Q5HYW3	569 aa	Predicted RBP	12.03	□□□□□ -0.48
CHMP4A-205	ENST00000531158	TMC4	Q7Z404	712 aa		12.03	□□□□□ -0.48
CHMP4A-205	ENST00000531158	ZNF609	O15014	1411 aa		12.03	□□□□□ -0.48
CHMP4A-205	ENST00000531158	LAMB1	P07942	1786 aa		12.02	□□□□□ -0.48
CHMP4A-205	ENST00000531158	PAPPA2	Q9BXP8	1791 aa		12.02	□□□□□ -0.48
CHMP4A-205	ENST00000531158		H7C1D1	291 aa		12.02	□□□□□ -0.49
CHMP4A-205	ENST00000531158	HDGFL1	Q5TGJ6	251 aa		12.02	□□□□□ -0.49
CHMP4A-205	ENST00000531158	ANKRD13D	Q6ZTN6	518 aa		12.02	□□□□□ -0.49
CHMP4A-205	ENST00000531158	CTU1	Q7Z7A3	348 aa	Known RBP	12.02	□□□□□ -0.49
CHMP4A-205	ENST00000531158	TBC1D16	Q8TBP0	767 aa		12.02	□□□□□ -0.49
CHMP4A-205	ENST00000531158	LMOD3	Q0VAK6	560 aa		12.01	□□□□□ -0.49
CHMP4A-205	ENST00000531158	KRT26	Q7Z3Y9	468 aa		12.01	□□□□□ -0.49
CHMP4A-205	ENST00000531158	GBA2	Q9HCG7	927 aa	Predicted RBP	12.01	□□□□□ -0.49
CHMP4A-205	ENST00000531158	SEC31B	Q9NQW1	1179 aa		12.01	□□□□□ -0.49
CHMP4A-205	ENST00000531158	SAGE1	Q9NXZ1	904 aa		12.01	□□□□□ -0.49
CHMP4A-205	ENST00000531158	ECM29	Q5VYK3	1845 aa		12	□□□□□ -0.49
CHMP4A-205	ENST00000531158	C6orf229	H3BNL8	230 aa		12	□□□□□ -0.49
CHMP4A-205	ENST00000531158	IRS4	O14654	1257 aa	Predicted RBP	12	□□□□□ -0.49
CHMP4A-205	ENST00000531158	TRPA1	O75762	1119 aa		12	□□□□□ -0.49
CHMP4A-205	ENST00000531158	RBM26	Q5T8P6	1007 aa	Known RBP	12	□□□□□ -0.49
CHMP4A-205	ENST00000531158	RGMB	Q6NW40	437 aa		12	□□□□□ -0.49
CHMP4A-205	ENST00000531158	SLC17A8	Q8NDX2	589 aa		12	□□□□□ -0.49
CHMP4A-205	ENST00000531158	GGA3	Q9NZ52	723 aa		12	□□□□□ -0.49
CHMP4A-205	ENST00000531158	DBF4	Q9UBU7	674 aa	Predicted RBP	12	□□□□□ -0.49
CHMP4A-205	ENST00000531158	LAS1L	Q9Y4W2	734 aa	Known RBP	12	□□□□□ -0.49
CHMP4A-205	ENST00000531158	HTT	P42858	3142 aa		12	□□□□□ -0.49
CHMP4A-205	ENST00000531158	WTIP	A6NIX2	430 aa	Predicted RBP	11.99	□□□□□ -0.49
CHMP4A-205	ENST00000531158	VIL1	P09327	827 aa	Known RBP	11.99	□□□□□ -0.49
CHMP4A-205	ENST00000531158	HOXB7	P09629	217 aa		11.99	□□□□□ -0.49
CHMP4A-205	ENST00000531158	RPS12	P25398	132 aa	Known RBP	11.99	□□□□□ -0.49
CHMP4A-205	ENST00000531158	KIF23	Q02241	960 aa	Predicted RBP	11.99	□□□□□ -0.49
CHMP4A-205	ENST00000531158	TRIM28	Q13263	835 aa	Known RBP	11.99	□□□□□ -0.49
CHMP4A-205	ENST00000531158	RALBP1	Q15311	655 aa		11.99	□□□□□ -0.49
CHMP4A-205	ENST00000531158	KIF4B	Q2VIQ3	1234 aa		11.99	□□□□□ -0.49
CHMP4A-205	ENST00000531158	DUSP27	Q5VZP5	1158 aa		11.99	□□□□□ -0.49
CHMP4A-205	ENST00000531158	PHAX	Q9H814	394 aa	Known RBP	11.99	□□□□□ -0.49
CHMP4A-205	ENST00000531158	MBIP	Q9NS73	344 aa		11.99	□□□□□ -0.49
CHMP4A-205	ENST00000531158	RNF186	Q9NXI6	227 aa		11.99	□□□□□ -0.49
CHMP4A-205	ENST00000531158	PODXL2	Q9NZ53	605 aa		11.99	□□□□□ -0.49
CHMP4A-205	ENST00000531158	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.98	□□□□□ -0.49
CHMP4A-205	ENST00000531158	CENPB	P07199	599 aa	Predicted RBP	11.98	□□□□□ -0.49
CHMP4A-205	ENST00000531158	SLC10A3	P09131	477 aa		11.98	□□□□□ -0.49
CHMP4A-205	ENST00000531158	ZNF853	P0CG23	659 aa		11.98	□□□□□ -0.49
CHMP4A-205	ENST00000531158	RPS8	P62241	208 aa	Known RBP	11.98	□□□□□ -0.49
CHMP4A-205	ENST00000531158	JARID2	Q92833	1246 aa	Predicted RBP	11.98	□□□□□ -0.49
CHMP4A-205	ENST00000531158	RUNDC1	Q96C34	613 aa		11.98	□□□□□ -0.49
CHMP4A-205	ENST00000531158	CDCA5	Q96FF9	252 aa		11.98	□□□□□ -0.49
CHMP4A-205	ENST00000531158	ADAMTS8	Q9UP79	889 aa		11.98	□□□□□ -0.49
CHMP4A-205	ENST00000531158	CENPF	P49454	3210 aa		11.98	□□□□□ -0.49
CHMP4A-205	ENST00000531158	ZNF157	P51786	506 aa	Predicted RBP	11.97	□□□□□ -0.49
CHMP4A-205	ENST00000531158	ZNF280A	P59817	542 aa	Predicted RBP	11.97	□□□□□ -0.49
CHMP4A-205	ENST00000531158	ANGEL2	Q5VTE6	544 aa	Known RBP	11.97	□□□□□ -0.49
CHMP4A-205	ENST00000531158	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.97	□□□□□ -0.49
CHMP4A-205	ENST00000531158	DCPS	Q96C86	337 aa	Known RBP	11.97	□□□□□ -0.49
CHMP4A-205	ENST00000531158	CSRNP1	Q96S65	589 aa		11.97	□□□□□ -0.49
CHMP4A-205	ENST00000531158	GML	Q99445	158 aa		11.97	□□□□□ -0.49
CHMP4A-205	ENST00000531158	HYPK	Q9NX55	129 aa		11.97	□□□□□ -0.49
CHMP4A-205	ENST00000531158	SCAF8	Q9UPN6	1271 aa	Known RBP	11.97	□□□□□ -0.49
CHMP4A-205	ENST00000531158	BRCA2	P51587	3418 aa		11.97	□□□□□ -0.49
CHMP4A-205	ENST00000531158	UFL1	O94874	794 aa		11.96	□□□□□ -0.49
CHMP4A-205	ENST00000531158	PKN2	Q16513	984 aa	Known RBP	11.96	□□□□□ -0.49
CHMP4A-205	ENST00000531158	MOB2	Q70IA6	237 aa		11.96	□□□□□ -0.49
CHMP4A-205	ENST00000531158	RASAL3	Q86YV0	1011 aa		11.96	□□□□□ -0.49
CHMP4A-205	ENST00000531158	C2orf69	Q8N8R5	385 aa		11.96	□□□□□ -0.49
CHMP4A-205	ENST00000531158	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.96	□□□□□ -0.49
CHMP4A-205	ENST00000531158	EYA3	Q99504	573 aa		11.96	□□□□□ -0.49
CHMP4A-205	ENST00000531158	MKI67	P46013	3256 aa	Known RBP	11.96	□□□□□ -0.5
CHMP4A-205	ENST00000531158	SCARF1	Q14162	830 aa		11.95	□□□□□ -0.5
CHMP4A-205	ENST00000531158	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.95	□□□□□ -0.5
CHMP4A-205	ENST00000531158	CCDC102A	Q96A19	550 aa		11.95	□□□□□ -0.5
CHMP4A-205	ENST00000531158	MYD88	Q99836	296 aa		11.95	□□□□□ -0.5
CHMP4A-205	ENST00000531158	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.95	□□□□□ -0.5
CHMP4A-205	ENST00000531158	CACNA1F	O60840	1977 aa		11.95	□□□□□ -0.5
CHMP4A-205	ENST00000531158	OTOF	Q9HC10	1997 aa		11.94	□□□□□ -0.5
CHMP4A-205	ENST00000531158	ELL2	O00472	640 aa	Predicted RBP	11.94	□□□□□ -0.5
CHMP4A-205	ENST00000531158	PCCA	P05165	728 aa	Predicted RBP	11.94	□□□□□ -0.5
CHMP4A-205	ENST00000531158	SULF1	Q8IWU6	871 aa		11.94	□□□□□ -0.5
CHMP4A-205	ENST00000531158	C8orf58	Q8NAV2	365 aa		11.94	□□□□□ -0.5
CHMP4A-205	ENST00000531158	MXD3	Q9BW11	206 aa		11.94	□□□□□ -0.5
CHMP4A-205	ENST00000531158	ANKIB1	Q9P2G1	1089 aa		11.94	□□□□□ -0.5
CHMP4A-205	ENST00000531158	GGA1	Q9UJY5	639 aa		11.94	□□□□□ -0.5
CHMP4A-205	ENST00000531158	HDAC9	Q9UKV0	1011 aa		11.94	□□□□□ -0.5
CHMP4A-205	ENST00000531158	RIC3	Q7Z5B4	369 aa		11.93	□□□□□ -0.5
CHMP4A-205	ENST00000531158	CCDC191	Q8NCU4	936 aa		11.93	□□□□□ -0.5
CHMP4A-205	ENST00000531158	AGBL3	Q8NEM8	1001 aa		11.93	□□□□□ -0.5
CHMP4A-205	ENST00000531158	MYOZ2	Q9NPC6	264 aa		11.93	□□□□□ -0.5
CHMP4A-205	ENST00000531158	COLQ	Q9Y215	455 aa	Predicted RBP	11.93	□□□□□ -0.5
CHMP4A-205	ENST00000531158	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.92	□□□□□ -0.5
CHMP4A-205	ENST00000531158	XDH	P47989	1333 aa		11.92	□□□□□ -0.5
CHMP4A-205	ENST00000531158	PDE8A	O60658	829 aa		11.92	□□□□□ -0.5
CHMP4A-205	ENST00000531158	IGKV5-2	P06315	115 aa		11.92	□□□□□ -0.5
CHMP4A-205	ENST00000531158	USP17L8	P0C7I0	530 aa		11.92	□□□□□ -0.5
CHMP4A-205	ENST00000531158	GOLGA2	Q08379	1002 aa		11.92	□□□□□ -0.5
CHMP4A-205	ENST00000531158	DDX10	Q13206	875 aa	Known RBP	11.92	□□□□□ -0.5
CHMP4A-205	ENST00000531158	NBPF9	Q3BBW0	867 aa		11.92	□□□□□ -0.5

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