RNA–Protein interactions for RNA: ENST00000531113.5

RPS6KA1-219, Transcript of ribosomal protein S6 kinase A1, human

TSL 2

Gene RPS6KA1, Length 2,089 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS6KA1-219	ENST00000531113	SMARCC1	Q92922	1105 aa	Predicted RBP	13.68	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	DSCC1	Q9BVC3	393 aa		13.68	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	PUS3	Q9BZE2	481 aa	Known RBP	13.68	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	CCDC87	Q9NVE4	849 aa		13.68	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	CCDC9	Q9Y3X0	531 aa	Known RBP	13.68	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	STX6	O43752	255 aa		13.67	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	CPA1	P15085	419 aa		13.67	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	ITGA6	P23229	1130 aa		13.67	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	TTLL11	Q8NHH1	800 aa		13.67	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	BRPF3	Q9ULD4	1205 aa		13.67	□□□□□ -0.22
RPS6KA1-219	ENST00000531113		A0A0G2JS52	829 aa		13.67	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	PDC	P20941	246 aa		13.67	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	METTL24	Q5JXM2	366 aa		13.67	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	ZMYM1	Q5SVZ6	1142 aa		13.67	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	LDHAL6A	Q6ZMR3	332 aa		13.67	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	ILDR1	Q86SU0	546 aa	Predicted RBP	13.67	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	CCDC83	Q8IWF9	413 aa		13.67	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	XAGE2	Q96GT9	111 aa		13.67	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	NEK1	Q96PY6	1258 aa		13.67	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	NDUFB9	Q9Y6M9	179 aa		13.67	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	RIC1	Q4ADV7	1423 aa		13.66	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.66	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	NUTM2E	B1AL46	878 aa	Predicted RBP	13.66	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	RNF113A	O15541	343 aa	Known RBP	13.66	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	ZSCAN22	P10073	491 aa	Predicted RBP	13.66	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	XRCC6	P12956	609 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	ATP6V1A	P38606	617 aa		13.66	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	EIF5	P55010	431 aa	Known RBP	13.66	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	ATP2B3	Q16720	1220 aa		13.66	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	CSPP1	Q1MSJ5	1256 aa		13.66	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	PARP10	Q53GL7	1025 aa		13.66	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.66	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.66	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.66	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	SYAP1	Q96A49	352 aa	Predicted RBP	13.66	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	CNNM1	Q9NRU3	951 aa		13.66	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	MYH3	P11055	1940 aa		13.66	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	LOC102724428	A0A0B4J2F2	783 aa		13.65	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	SIK1	P57059	783 aa		13.65	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	ZNF445	P59923	1031 aa		13.65	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	CAVIN1	Q6NZI2	390 aa	Known RBP	13.65	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	ZNF34	Q8IZ26	560 aa		13.65	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	GREM2	Q9H772	168 aa		13.65	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	TBC1D2B	Q9UPU7	963 aa		13.65	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	RREB1	Q92766	1687 aa		13.65	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	SYT1	P21579	422 aa		13.65	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	GJB2	P29033	226 aa		13.65	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	CRKL	P46109	303 aa	Known RBP	13.65	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	ME3	Q16798	604 aa		13.65	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.65	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	RIPOR2	Q9Y4F9	1068 aa		13.65	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	NUP98	P52948	1817 aa		13.65	□□□□□ -0.22
RPS6KA1-219	ENST00000531113	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	ZSCAN25	Q6NSZ9	544 aa		13.64	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	MARCH10	Q8NA82	808 aa	Predicted RBP	13.64	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.64	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.64	□□□□□ -0.23	7e-7	■■■□□ 18.3
RPS6KA1-219	ENST00000531113	TPCN1	Q9ULQ1	816 aa		13.64	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	ZNF652	Q9Y2D9	606 aa		13.64	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	LRP5	O75197	1615 aa		13.64	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	LARGE1	O95461	756 aa		13.63	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	TTF1	Q15361	905 aa	Predicted RBP	13.63	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	CCDC129	Q6ZRS4	1044 aa		13.63	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	ANP32B	Q92688	251 aa	Known RBP	13.63	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	SEC62	Q99442	399 aa	Known RBP	13.63	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	MROH5	Q6ZUA9	1318 aa		13.63	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	KAT6B	Q8WYB5	2073 aa		13.63	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	MAST3	O60307	1309 aa		13.63	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	UBN2	Q6ZU65	1347 aa		13.63	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	F13A1	P00488	732 aa		13.63	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	CYP21A2	P08686	494 aa		13.63	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	PIP4K2B	P78356	416 aa		13.63	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	ZSCAN23	Q3MJ62	389 aa		13.63	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	INTS5	Q6P9B9	1019 aa	Known RBP	13.63	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	TMEM87A	Q8NBN3	555 aa		13.63	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	CHMP4C	Q96CF2	233 aa		13.63	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	ACSBG1	Q96GR2	724 aa		13.63	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	LARP6	Q9BRS8	491 aa	Known RBP	13.63	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	CTNNA3	Q9UI47	895 aa		13.63	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	PHF14	O94880	888 aa		13.62	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	FGD1	P98174	961 aa		13.62	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	UTP14A	Q9BVJ6	771 aa	Known RBP	13.62	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	ZNF831	Q5JPB2	1677 aa		13.62	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	PDE8B	O95263	885 aa		13.62	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	ADORA1	P30542	326 aa		13.62	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	TOB2	Q14106	344 aa	Predicted RBP	13.62	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	PUM3	Q15397	648 aa	Known RBP	13.62	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	GPT2	Q8TD30	523 aa		13.62	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	UQCRFS1P1	P0C7P4	283 aa		13.61	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	HSPD1	P10809	573 aa	Known RBP	13.61	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	APPBP2	Q92624	585 aa		13.61	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	WASHC4	Q2M389	1173 aa		13.6	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	DHX32	Q7L7V1	743 aa	Known RBP	13.6	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	SYNE4	Q8N205	404 aa		13.6	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	VGLL2	Q8N8G2	317 aa		13.6	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	LPIN2	Q92539	896 aa		13.6	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	RTL9	Q8NET4	1388 aa		13.6	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	CAMTA2	O94983	1202 aa		13.6	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	CCDC152	Q4G0S7	254 aa		13.6	□□□□□ -0.23
RPS6KA1-219	ENST00000531113	LARP1B	Q659C4	914 aa	Known RBP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms