RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 ANKRD31Q8N7Z5 1873 aa19.12■□□□□ 0.65
CCS-206ENST00000530961 NFKBIEO00221 500 aa19.12■□□□□ 0.65
CCS-206ENST00000530961 CTCFP49711 727 aaPredicted RBP19.12■□□□□ 0.65
CCS-206ENST00000530961 FKBP4Q02790 459 aaKnown RBP eCLIP19.12■□□□□ 0.65
CCS-206ENST00000530961 TAF7LQ5H9L4 462 aa19.12■□□□□ 0.65
CCS-206ENST00000530961 OLFM4Q6UX06 510 aa19.12■□□□□ 0.65
CCS-206ENST00000530961 AIDAQ96BJ3 306 aa19.12■□□□□ 0.65
CCS-206ENST00000530961 PSMD1Q99460 953 aa19.12■□□□□ 0.65
CCS-206ENST00000530961 COG6Q9Y2V7 657 aa19.12■□□□□ 0.65
CCS-206ENST00000530961 RGS19P49795 217 aa19.11■□□□□ 0.65
CCS-206ENST00000530961 MPNDQ8N594 471 aa19.11■□□□□ 0.65
CCS-206ENST00000530961 LMNB1P20700 586 aa19.1■□□□□ 0.65
CCS-206ENST00000530961 MTX1Q13505 466 aa19.1■□□□□ 0.65
CCS-206ENST00000530961 C20orf194Q5TEA3 1177 aa19.1■□□□□ 0.65
CCS-206ENST00000530961 DPP8Q6V1X1 898 aaPredicted RBP19.1■□□□□ 0.65
CCS-206ENST00000530961 SUPT20HQ8NEM7 779 aa19.1■□□□□ 0.65
CCS-206ENST00000530961 RTFDC1Q9BY42 306 aaPredicted RBP19.1■□□□□ 0.65
CCS-206ENST00000530961 VPS33BQ9H267 617 aa19.1■□□□□ 0.65
CCS-206ENST00000530961 PODXL2Q9NZ53 605 aa19.1■□□□□ 0.65
CCS-206ENST00000530961 NSFL1CQ9UNZ2 370 aaKnown RBP19.1■□□□□ 0.65
CCS-206ENST00000530961 LDHAL6AQ6ZMR3 332 aa19.09■□□□□ 0.65
CCS-206ENST00000530961 MINPP1Q9UNW1 487 aa19.09■□□□□ 0.65
CCS-206ENST00000530961 N4BP2Q86UW6 1770 aaPredicted RBP19.09■□□□□ 0.65
CCS-206ENST00000530961 RASSF7Q02833 373 aa19.08■□□□□ 0.64
CCS-206ENST00000530961 ANKRD2Q9GZV1 360 aa19.08■□□□□ 0.64
CCS-206ENST00000530961 ZBTB40Q9NUA8 1239 aa19.08■□□□□ 0.64
CCS-206ENST00000530961 ANKIB1Q9P2G1 1089 aa19.08■□□□□ 0.64
CCS-206ENST00000530961 GPSM2P81274 684 aa19.07■□□□□ 0.64
CCS-206ENST00000530961 ZNF594Q96JF6 807 aaPredicted RBP19.07■□□□□ 0.64
CCS-206ENST00000530961 CNNM1Q9NRU3 951 aa19.07■□□□□ 0.64
CCS-206ENST00000530961 COL11A2P13942 1736 aaPredicted RBP19.07■□□□□ 0.64
CCS-206ENST00000530961 SNED1Q8TER0 1413 aa19.07■□□□□ 0.64
CCS-206ENST00000530961 XDHP47989 1333 aa19.06■□□□□ 0.64
CCS-206ENST00000530961 SRGAP3O43295 1099 aa19.06■□□□□ 0.64
CCS-206ENST00000530961 RFX5P48382 616 aaPredicted RBP19.06■□□□□ 0.64
CCS-206ENST00000530961 SLC51AQ86UW1 340 aa19.06■□□□□ 0.64
CCS-206ENST00000530961 GGA1Q9UJY5 639 aa19.06■□□□□ 0.64
CCS-206ENST00000530961 FBXO3Q9UK99 471 aa19.06■□□□□ 0.64
CCS-206ENST00000530961 ATP2B4P23634 1241 aa19.05■□□□□ 0.64
CCS-206ENST00000530961 IARSP41252 1262 aaKnown RBP19.05■□□□□ 0.64
CCS-206ENST00000530961 ATP8B2P98198 1209 aa19.05■□□□□ 0.64
CCS-206ENST00000530961 PTPN12Q05209 780 aaKnown RBP19.05■□□□□ 0.64
CCS-206ENST00000530961 CHRNDQ07001 517 aa19.05■□□□□ 0.64
CCS-206ENST00000530961 ZNF277Q9NRM2 450 aaPredicted RBP19.05■□□□□ 0.64
CCS-206ENST00000530961 RNF181Q9P0P0 153 aa19.05■□□□□ 0.64
CCS-206ENST00000530961 SUPT16HQ9Y5B9 1047 aaKnown RBP19.05■□□□□ 0.64
CCS-206ENST00000530961 DDX60Q8IY21 1712 aaKnown RBP19.05■□□□□ 0.64
CCS-206ENST00000530961 CCDC85CA6NKD9 419 aa19.04■□□□□ 0.64
CCS-206ENST00000530961 C6orf229H3BNL8 230 aa19.04■□□□□ 0.64
CCS-206ENST00000530961 TBC1D16Q8TBP0 767 aa19.04■□□□□ 0.64
CCS-206ENST00000530961 EYA3Q99504 573 aa19.04■□□□□ 0.64
CCS-206ENST00000530961 COPRSQ9NQ92 184 aa19.04■□□□□ 0.64
CCS-206ENST00000530961 POLLQ9UGP5 575 aa19.04■□□□□ 0.64
CCS-206ENST00000530961 MKRN1Q9UHC7 482 aaKnown RBP19.04■□□□□ 0.64
CCS-206ENST00000530961 LEMD3Q9Y2U8 911 aa19.04■□□□□ 0.64
CCS-206ENST00000530961 RIPOR2Q9Y4F9 1068 aa19.04■□□□□ 0.64
CCS-206ENST00000530961 EYA2O00167 538 aa19.03■□□□□ 0.64
CCS-206ENST00000530961 C1orf115Q9H7X2 142 aa19.03■□□□□ 0.64
CCS-206ENST00000530961 DLEC1Q9Y238 1755 aa19.03■□□□□ 0.64
CCS-206ENST00000530961 MROH5Q6ZUA9 1318 aa19.02■□□□□ 0.64
CCS-206ENST00000530961 ZC3H4Q9UPT8 1303 aaKnown RBP19.02■□□□□ 0.64
CCS-206ENST00000530961 PPIP5K2O43314 1243 aa19.02■□□□□ 0.64
CCS-206ENST00000530961 CIAO1O76071 339 aa19.02■□□□□ 0.64
CCS-206ENST00000530961 UFL1O94874 794 aa19.02■□□□□ 0.64
CCS-206ENST00000530961 KIAA2012Q0VF49 1180 aa19.02■□□□□ 0.64
CCS-206ENST00000530961 WASHC4Q2M389 1173 aa19.02■□□□□ 0.64
CCS-206ENST00000530961 RPAP2Q8IXW5 612 aaPredicted RBP19.02■□□□□ 0.64
CCS-206ENST00000530961 KLHDC4Q8TBB5 520 aa19.02■□□□□ 0.64
CCS-206ENST00000530961 JDP2Q8WYK2 163 aa19.02■□□□□ 0.64
CCS-206ENST00000530961 PUS3Q9BZE2 481 aaKnown RBP19.02■□□□□ 0.64
CCS-206ENST00000530961 CREBZFQ9NS37 354 aa19.02■□□□□ 0.64
CCS-206ENST00000530961 PNMA6EA0A0J9YXQ4 647 aa19.01■□□□□ 0.63
CCS-206ENST00000530961 VEGFAP15692 232 aaPredicted RBP19.01■□□□□ 0.63
CCS-206ENST00000530961 LBX1P52954 281 aa19.01■□□□□ 0.63
CCS-206ENST00000530961 POLA2Q14181 598 aa19.01■□□□□ 0.63
CCS-206ENST00000530961 LRRC24Q50LG9 513 aa19.01■□□□□ 0.63
CCS-206ENST00000530961 CEP85Q6P2H3 762 aa19.01■□□□□ 0.63
CCS-206ENST00000530961 LARGE2Q8N3Y3 721 aa19.01■□□□□ 0.63
CCS-206ENST00000530961 SSH3Q8TE77 659 aa19.01■□□□□ 0.63
CCS-206ENST00000530961 ZC3H12CQ9C0D7 883 aaKnown RBP19.01■□□□□ 0.63
CCS-206ENST00000530961 SLX4Q8IY92 1834 aa19.01■□□□□ 0.63
CCS-206ENST00000530961 LAMB2P55268 1798 aa19.01■□□□□ 0.63
CCS-206ENST00000530961 IL15P40933 162 aaPredicted RBP19■□□□□ 0.63
CCS-206ENST00000530961 KCNJ4P48050 445 aa19■□□□□ 0.63
CCS-206ENST00000530961 ZNF804BA4D1E1 1349 aa19■□□□□ 0.63
CCS-206ENST00000530961 BRCA1P38398 1863 aaKnown RBP18.99■□□□□ 0.63
CCS-206ENST00000530961 AAMPQ13685 434 aa18.99■□□□□ 0.63
CCS-206ENST00000530961 AOC3Q16853 763 aa18.99■□□□□ 0.63
CCS-206ENST00000530961 METTL24Q5JXM2 366 aa18.99■□□□□ 0.63
CCS-206ENST00000530961 NIM1KQ8IY84 436 aa18.99■□□□□ 0.63
CCS-206ENST00000530961 PA2G4Q9UQ80 394 aaKnown RBP18.99■□□□□ 0.63
CCS-206ENST00000530961 HMMRO75330 724 aa18.98■□□□□ 0.63
CCS-206ENST00000530961 TAF5LO75529 589 aa18.98■□□□□ 0.63
CCS-206ENST00000530961 UBE4AQ14139 1066 aa18.98■□□□□ 0.63
CCS-206ENST00000530961 ATG9AQ7Z3C6 839 aa18.98■□□□□ 0.63
CCS-206ENST00000530961 HELBQ8NG08 1087 aaPredicted RBP18.98■□□□□ 0.63
CCS-206ENST00000530961 SIL1Q9H173 461 aa18.98■□□□□ 0.63
CCS-206ENST00000530961 FZD9O00144 591 aa18.97■□□□□ 0.63
CCS-206ENST00000530961 RIMBP2O15034 1052 aa18.97■□□□□ 0.63
CCS-206ENST00000530961 PDE8BO95263 885 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms