RNA–Protein interactions for RNA: ENST00000530903.1

RPUSD4-205, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-205ENST00000530903 EFCAB3Q8N7B9 438 aa12.46□□□□□ -0.41
RPUSD4-205ENST00000530903 KDM2BQ8NHM5 1336 aa12.46□□□□□ -0.42
RPUSD4-205ENST00000530903 SH3TC1Q8TE82 1336 aa12.46□□□□□ -0.42
RPUSD4-205ENST00000530903 CDHR2Q9BYE9 1310 aa12.46□□□□□ -0.42
RPUSD4-205ENST00000530903 IRS4O14654 1257 aaPredicted RBP12.45□□□□□ -0.42
RPUSD4-205ENST00000530903 SRGAP3O43295 1099 aa12.45□□□□□ -0.42
RPUSD4-205ENST00000530903 FOXO4P98177 505 aa12.45□□□□□ -0.42
RPUSD4-205ENST00000530903 ATP8B2P98198 1209 aa12.45□□□□□ -0.42
RPUSD4-205ENST00000530903 NBPF5PQ86XG9 351 aaPredicted RBP12.45□□□□□ -0.42
RPUSD4-205ENST00000530903 CARMIL3Q8ND23 1372 aa12.45□□□□□ -0.42
RPUSD4-205ENST00000530903 HMMRO75330 724 aa12.45□□□□□ -0.42
RPUSD4-205ENST00000530903 HCLS1P14317 486 aaPredicted RBP12.45□□□□□ -0.42
RPUSD4-205ENST00000530903 ERFEQ4G0M1 354 aa12.45□□□□□ -0.42
RPUSD4-205ENST00000530903 LMBR1LQ6UX01 489 aa12.45□□□□□ -0.42
RPUSD4-205ENST00000530903 CENPQQ7L2Z9 268 aaPredicted RBP12.45□□□□□ -0.42
RPUSD4-205ENST00000530903 PDGFDQ9GZP0 370 aaPredicted RBP12.45□□□□□ -0.42
RPUSD4-205ENST00000530903 NYXQ9GZU5 481 aa12.45□□□□□ -0.42
RPUSD4-205ENST00000530903 CHMP3Q9Y3E7 222 aa12.45□□□□□ -0.42
RPUSD4-205ENST00000530903 NPHP1O15259 732 aa12.44□□□□□ -0.42
RPUSD4-205ENST00000530903 GTF2E1P29083 439 aaPredicted RBP12.44□□□□□ -0.42
RPUSD4-205ENST00000530903 TM4SF1P30408 202 aa12.44□□□□□ -0.42
RPUSD4-205ENST00000530903 DDR1Q08345 913 aa12.44□□□□□ -0.42
RPUSD4-205ENST00000530903 ZNF710Q8N1W2 664 aa12.44□□□□□ -0.42
RPUSD4-205ENST00000530903 CCDC24Q8N4L8 307 aa12.44□□□□□ -0.42
RPUSD4-205ENST00000530903 CCDC85AQ96PX6 553 aaPredicted RBP12.44□□□□□ -0.42
RPUSD4-205ENST00000530903 ABCC12Q96J65 1359 aa12.44□□□□□ -0.42
RPUSD4-205ENST00000530903 MTX1Q13505 466 aa12.43□□□□□ -0.42
RPUSD4-205ENST00000530903 RABL6Q3YEC7 729 aaPredicted RBP12.43□□□□□ -0.42
RPUSD4-205ENST00000530903 TPTE2Q6XPS3 522 aa12.43□□□□□ -0.42
RPUSD4-205ENST00000530903 NLGN1Q8N2Q7 840 aa12.43□□□□□ -0.42
RPUSD4-205ENST00000530903 SSH3Q8TE77 659 aa12.43□□□□□ -0.42
RPUSD4-205ENST00000530903 PLA2G12BQ9BX93 195 aa12.43□□□□□ -0.42
RPUSD4-205ENST00000530903 TNRC6CQ9HCJ0 1690 aaKnown RBP12.42□□□□□ -0.42
RPUSD4-205ENST00000530903 POLRMTO00411 1230 aaKnown RBP12.42□□□□□ -0.42
RPUSD4-205ENST00000530903 PDE8AO60658 829 aa12.42□□□□□ -0.42
RPUSD4-205ENST00000530903 SERPINB2P05120 415 aa12.42□□□□□ -0.42
RPUSD4-205ENST00000530903 MMP10P09238 476 aa12.42□□□□□ -0.42
RPUSD4-205ENST00000530903 CTSWP56202 376 aa12.42□□□□□ -0.42
RPUSD4-205ENST00000530903 CNBD1Q8NA66 436 aa12.42□□□□□ -0.42
RPUSD4-205ENST00000530903 APBB1O00213 710 aa12.41□□□□□ -0.42
RPUSD4-205ENST00000530903 R3HDM1Q15032 1099 aaKnown RBP12.41□□□□□ -0.42
RPUSD4-205ENST00000530903 FAM161AQ3B820 660 aa12.41□□□□□ -0.42
RPUSD4-205ENST00000530903 PRR5LQ6MZQ0 368 aa12.41□□□□□ -0.42
RPUSD4-205ENST00000530903 DCTPP1Q9H773 170 aa12.41□□□□□ -0.42
RPUSD4-205ENST00000530903 PA2G4Q9UQ80 394 aaKnown RBP12.41□□□□□ -0.42
RPUSD4-205ENST00000530903 EXOC6BQ9Y2D4 811 aa12.41□□□□□ -0.42
RPUSD4-205ENST00000530903 NRXN2Q9P2S2 1712 aa12.41□□□□□ -0.42
RPUSD4-205ENST00000530903 SPEF2Q9C093 1822 aa12.4□□□□□ -0.42
RPUSD4-205ENST00000530903 CSF1RP07333 972 aa12.4□□□□□ -0.42
RPUSD4-205ENST00000530903 HSP90B1P14625 803 aaKnown RBP12.4□□□□□ -0.42
RPUSD4-205ENST00000530903 SMC5Q8IY18 1101 aa12.4□□□□□ -0.42
RPUSD4-205ENST00000530903 TTLL11Q8NHH1 800 aa12.4□□□□□ -0.42
RPUSD4-205ENST00000530903 KLHDC4Q8TBB5 520 aa12.4□□□□□ -0.42
RPUSD4-205ENST00000530903 GCC1Q96CN9 775 aa12.4□□□□□ -0.42
RPUSD4-205ENST00000530903 GREM2Q9H772 168 aa12.4□□□□□ -0.42
RPUSD4-205ENST00000530903 PSDA5PKW4 1024 aaPredicted RBP12.39□□□□□ -0.43
RPUSD4-205ENST00000530903 SURF6O75683 361 aaKnown RBP12.39□□□□□ -0.43
RPUSD4-205ENST00000530903 RFX5P48382 616 aaPredicted RBP12.39□□□□□ -0.43
RPUSD4-205ENST00000530903 ST5P78524 1137 aa12.39□□□□□ -0.43
RPUSD4-205ENST00000530903 SLC10A5Q5PT55 438 aa12.39□□□□□ -0.43
RPUSD4-205ENST00000530903 SKAP1Q86WV1 359 aa12.39□□□□□ -0.43
RPUSD4-205ENST00000530903 SIL1Q9H173 461 aa12.39□□□□□ -0.43
RPUSD4-205ENST00000530903 PARP3Q9Y6F1 533 aa12.39□□□□□ -0.43
RPUSD4-205ENST00000530903 TAF1P21675 1872 aa12.39□□□□□ -0.43
RPUSD4-205ENST00000530903 ANKRD31Q8N7Z5 1873 aa12.39□□□□□ -0.43
RPUSD4-205ENST00000530903 OS9Q13438 667 aaPredicted RBP12.38□□□□□ -0.43
RPUSD4-205ENST00000530903 CCDC57Q2TAC2 916 aa12.38□□□□□ -0.43
RPUSD4-205ENST00000530903 ANKRD45Q5TZF3 282 aa12.38□□□□□ -0.43
RPUSD4-205ENST00000530903 MICALL2Q8IY33 904 aa12.38□□□□□ -0.43
RPUSD4-205ENST00000530903 ZNF594Q96JF6 807 aaPredicted RBP12.38□□□□□ -0.43
RPUSD4-205ENST00000530903 ZSWIM6Q9HCJ5 1215 aa12.38□□□□□ -0.43
RPUSD4-205ENST00000530903 PDZRN3Q9UPQ7 1066 aa12.38□□□□□ -0.43
RPUSD4-205ENST00000530903 RIMBP2O15034 1052 aa12.37□□□□□ -0.43
RPUSD4-205ENST00000530903 ZBTB7AO95365 584 aa12.37□□□□□ -0.43
RPUSD4-205ENST00000530903 ITGA6P23229 1130 aa12.37□□□□□ -0.43
RPUSD4-205ENST00000530903 PTPN12Q05209 780 aaKnown RBP12.37□□□□□ -0.43
RPUSD4-205ENST00000530903 IFIT5Q13325 482 aaKnown RBP12.37□□□□□ -0.43
RPUSD4-205ENST00000530903 CCDC152Q4G0S7 254 aa12.37□□□□□ -0.43
RPUSD4-205ENST00000530903 TMEM92Q6UXU6 159 aa12.37□□□□□ -0.43
RPUSD4-205ENST00000530903 SLC16A10Q8TF71 515 aa12.37□□□□□ -0.43
RPUSD4-205ENST00000530903 NLRP3Q96P20 1036 aa12.37□□□□□ -0.43
RPUSD4-205ENST00000530903 COL4A1P02462 1669 aa12.37□□□□□ -0.43
RPUSD4-205ENST00000530903 ANKRD18BA2A2Z9 1011 aa12.37□□□□□ -0.43
RPUSD4-205ENST00000530903 SMARCA5O60264 1052 aaPredicted RBP12.37□□□□□ -0.43
RPUSD4-205ENST00000530903 TAF7LQ5H9L4 462 aa12.37□□□□□ -0.43
RPUSD4-205ENST00000530903 COPRSQ9NQ92 184 aa12.37□□□□□ -0.43
RPUSD4-205ENST00000530903 SEC31BQ9NQW1 1179 aa12.37□□□□□ -0.43
RPUSD4-205ENST00000530903 NOP58Q9Y2X3 529 aaKnown RBP12.37□□□□□ -0.43
RPUSD4-205ENST00000530903 RIC1Q4ADV7 1423 aa12.36□□□□□ -0.43
RPUSD4-205ENST00000530903 NUCB1Q02818 461 aa12.36□□□□□ -0.43
RPUSD4-205ENST00000530903 G3BP1Q13283 466 aaKnown RBP eCLIP12.36□□□□□ -0.43
RPUSD4-205ENST00000530903 SF3B3Q15393 1217 aaKnown RBP12.36□□□□□ -0.43
RPUSD4-205ENST00000530903 LNPKQ9C0E8 428 aa12.36□□□□□ -0.43
RPUSD4-205ENST00000530903 RBM19Q9Y4C8 960 aaKnown RBP12.36□□□□□ -0.43
RPUSD4-205ENST00000530903 RTL9Q8NET4 1388 aa12.35□□□□□ -0.43
RPUSD4-205ENST00000530903 LRP5O75197 1615 aa12.35□□□□□ -0.43
RPUSD4-205ENST00000530903 RAB11FIP3O75154 756 aa12.35□□□□□ -0.43
RPUSD4-205ENST00000530903 HSP90AB4PQ58FF6 505 aa12.35□□□□□ -0.43
RPUSD4-205ENST00000530903 ERICH6Q7L0X2 663 aa12.35□□□□□ -0.43
RPUSD4-205ENST00000530903 CHD1LQ86WJ1 897 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms