RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 SMC1AQ14683 1233 aaKnown RBP9.71□□□□□ -0.86
CTNND1-227ENST00000530748 LRSAM1Q6UWE0 723 aa9.71□□□□□ -0.86
CTNND1-227ENST00000530748 GDPD2Q9HCC8 539 aa9.71□□□□□ -0.86
CTNND1-227ENST00000530748 EIF4G3O43432 1585 aaKnown RBP9.7□□□□□ -0.86
CTNND1-227ENST00000530748 NUP153P49790 1475 aaKnown RBP9.7□□□□□ -0.86
CTNND1-227ENST00000530748 CALM1P0DP23 149 aa9.7□□□□□ -0.86
CTNND1-227ENST00000530748 CALM2P0DP24 149 aa9.7□□□□□ -0.86
CTNND1-227ENST00000530748 CALM3P0DP25 149 aa9.7□□□□□ -0.86
CTNND1-227ENST00000530748 HEATR3Q7Z4Q2 680 aa9.7□□□□□ -0.86
CTNND1-227ENST00000530748 ANKRD44Q8N8A2 993 aa9.7□□□□□ -0.86
CTNND1-227ENST00000530748 FLT4P35916 1363 aa9.7□□□□□ -0.86
CTNND1-227ENST00000530748 EIF4A2Q14240 407 aaKnown RBP9.7□□□□□ -0.86
CTNND1-227ENST00000530748 CEP135Q66GS9 1140 aa9.7□□□□□ -0.86
CTNND1-227ENST00000530748 TTC12Q9H892 705 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-227ENST00000530748 PAG1Q9NWQ8 432 aa9.7□□□□□ -0.86
CTNND1-227ENST00000530748 RBM8AQ9Y5S9 174 aaKnown RBP9.7□□□□□ -0.86
CTNND1-227ENST00000530748 CCDC171Q6TFL3 1326 aa9.7□□□□□ -0.86
CTNND1-227ENST00000530748 IDEP14735 1019 aa9.7□□□□□ -0.86
CTNND1-227ENST00000530748 GNAQP50148 359 aa9.7□□□□□ -0.86
CTNND1-227ENST00000530748 PDE1AP54750 535 aa9.7□□□□□ -0.86
CTNND1-227ENST00000530748 GIGYF2Q6Y7W6 1299 aaKnown RBP9.7□□□□□ -0.86
CTNND1-227ENST00000530748 CCDC97Q96F63 343 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-227ENST00000530748 MEIS3Q99687 375 aa9.7□□□□□ -0.86
CTNND1-227ENST00000530748 NMIQ13287 307 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-227ENST00000530748 KLHL40Q2TBA0 621 aa9.7□□□□□ -0.86
CTNND1-227ENST00000530748 NBPF7P0C2Y1 421 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-227ENST00000530748 NPATQ14207 1427 aa9.69□□□□□ -0.86
CTNND1-227ENST00000530748 NAA16Q6N069 864 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-227ENST00000530748 PARD3Q8TEW0 1356 aa9.69□□□□□ -0.86
CTNND1-227ENST00000530748 CCDC174Q6PII3 467 aa9.69□□□□□ -0.86
CTNND1-227ENST00000530748 COPS6Q7L5N1 327 aa9.69□□□□□ -0.86
CTNND1-227ENST00000530748 ZNF710Q8N1W2 664 aa9.69□□□□□ -0.86
CTNND1-227ENST00000530748 BRF1Q92994 677 aa9.69□□□□□ -0.86
CTNND1-227ENST00000530748 ACSBG1Q96GR2 724 aa9.69□□□□□ -0.86
CTNND1-227ENST00000530748 DRC1Q96MC2 740 aa9.69□□□□□ -0.86
CTNND1-227ENST00000530748 FERMT1Q9BQL6 677 aa9.69□□□□□ -0.86
CTNND1-227ENST00000530748 RNF113AO15541 343 aaKnown RBP9.69□□□□□ -0.86
CTNND1-227ENST00000530748 C16orf71Q8IYS4 520 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-227ENST00000530748 PAXBP1Q9Y5B6 917 aa9.69□□□□□ -0.86
CTNND1-227ENST00000530748 KRT2P35908 639 aa9.69□□□□□ -0.86
CTNND1-227ENST00000530748 CKAP4Q07065 602 aaKnown RBP9.69□□□□□ -0.86
CTNND1-227ENST00000530748 ISM2Q6H9L7 571 aa9.69□□□□□ -0.86
CTNND1-227ENST00000530748 DDX12PQ92771 950 aa9.69□□□□□ -0.86
CTNND1-227ENST00000530748 C16orf45Q96MC5 204 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-227ENST00000530748 CNPY2Q9Y2B0 182 aa9.69□□□□□ -0.86
CTNND1-227ENST00000530748 NECAB1Q8N987 351 aa9.69□□□□□ -0.86
CTNND1-227ENST00000530748 CTR9Q6PD62 1173 aa9.68□□□□□ -0.86
CTNND1-227ENST00000530748 USP37Q86T82 979 aa9.68□□□□□ -0.86
CTNND1-227ENST00000530748 PANK2Q9BZ23 570 aa9.68□□□□□ -0.86
CTNND1-227ENST00000530748 PUF60Q9UHX1 559 aaKnown RBP9.68□□□□□ -0.86
CTNND1-227ENST00000530748 ABCC10Q5T3U5 1492 aa9.68□□□□□ -0.86
CTNND1-227ENST00000530748 ANXA1P04083 346 aa9.68□□□□□ -0.86
CTNND1-227ENST00000530748 NOP2P46087 812 aaKnown RBP9.68□□□□□ -0.86
CTNND1-227ENST00000530748 PCDH11XQ9BZA7 1347 aa9.68□□□□□ -0.86
CTNND1-227ENST00000530748 PCDH11YQ9BZA8 1340 aa9.68□□□□□ -0.86
CTNND1-227ENST00000530748 ARHGEF12Q9NZN5 1544 aa9.68□□□□□ -0.86
CTNND1-227ENST00000530748 IL2RBP14784 551 aa9.68□□□□□ -0.86
CTNND1-227ENST00000530748 ZNF165P49910 485 aa9.68□□□□□ -0.86
CTNND1-227ENST00000530748 MTHFSDQ2M296 383 aaKnown RBP9.68□□□□□ -0.86
CTNND1-227ENST00000530748 RRP36Q96EU6 259 aaKnown RBP9.68□□□□□ -0.86
CTNND1-227ENST00000530748 PUS7Q96PZ0 661 aaKnown RBP9.68□□□□□ -0.86
CTNND1-227ENST00000530748 MMRN2Q9H8L6 949 aa9.68□□□□□ -0.86
CTNND1-227ENST00000530748 PIK3C2GO75747 1445 aa9.68□□□□□ -0.86
CTNND1-227ENST00000530748 SOS1Q07889 1333 aaPredicted RBP9.68□□□□□ -0.86
CTNND1-227ENST00000530748 MACROD2A1Z1Q3 448 aa9.68□□□□□ -0.86
CTNND1-227ENST00000530748 NF2P35240 595 aa9.68□□□□□ -0.86
CTNND1-227ENST00000530748 NAPAP54920 295 aa9.68□□□□□ -0.86
CTNND1-227ENST00000530748 PICALMQ13492 652 aa9.68□□□□□ -0.86
CTNND1-227ENST00000530748 DZIP3Q86Y13 1208 aaKnown RBP9.68□□□□□ -0.86
CTNND1-227ENST00000530748 DHX37Q8IY37 1157 aaKnown RBP9.68□□□□□ -0.86
CTNND1-227ENST00000530748 C8orf58Q8NAV2 365 aa9.68□□□□□ -0.86
CTNND1-227ENST00000530748 UBE2Q2Q8WVN8 375 aa9.68□□□□□ -0.86
CTNND1-227ENST00000530748 MRPS27Q92552 414 aaKnown RBP9.68□□□□□ -0.86
CTNND1-227ENST00000530748 NLRP3Q96P20 1036 aa9.68□□□□□ -0.86
CTNND1-227ENST00000530748 NIP7Q9Y221 180 aaKnown RBP eCLIP9.68□□□□□ -0.86
CTNND1-227ENST00000530748 UBASH3AP57075 661 aa9.67□□□□□ -0.86
CTNND1-227ENST00000530748 PRPF4BQ13523 1007 aaKnown RBP9.67□□□□□ -0.86
CTNND1-227ENST00000530748 ANO6Q4KMQ2 910 aa9.67□□□□□ -0.86
CTNND1-227ENST00000530748 USP48Q86UV5 1035 aa9.67□□□□□ -0.86
CTNND1-227ENST00000530748 C6orf50Q9HD87 102 aa9.67□□□□□ -0.86
CTNND1-227ENST00000530748 JADE2Q9NQC1 790 aa9.67□□□□□ -0.86
CTNND1-227ENST00000530748 RTL1A6NKG5 1358 aa9.67□□□□□ -0.86
CTNND1-227ENST00000530748 DNMT1P26358 1616 aaKnown RBP9.67□□□□□ -0.86
CTNND1-227ENST00000530748 F13A1P00488 732 aa9.67□□□□□ -0.86
CTNND1-227ENST00000530748 KRT13P13646 458 aa9.67□□□□□ -0.86
CTNND1-227ENST00000530748 AFMP43652 599 aa9.67□□□□□ -0.86
CTNND1-227ENST00000530748 SNX21Q969T3 373 aa9.67□□□□□ -0.86
CTNND1-227ENST00000530748 PBRM1Q86U86 1689 aa9.67□□□□□ -0.86
CTNND1-227ENST00000530748 HSF2BPO75031 334 aa9.67□□□□□ -0.86
CTNND1-227ENST00000530748 SMARCC2Q8TAQ2 1214 aa9.67□□□□□ -0.86
CTNND1-227ENST00000530748 ANKRD2Q9GZV1 360 aa9.67□□□□□ -0.86
CTNND1-227ENST00000530748 N4BP3O15049 544 aa9.67□□□□□ -0.86
CTNND1-227ENST00000530748 MYCNP04198 464 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-227ENST00000530748 SLC39A6Q13433 755 aa9.67□□□□□ -0.86
CTNND1-227ENST00000530748 HLTFQ14527 1009 aaKnown RBP eCLIP9.67□□□□□ -0.865e-6■□□□□ 9.8
CTNND1-227ENST00000530748 TSNARE1Q96NA8 513 aa9.67□□□□□ -0.86
CTNND1-227ENST00000530748 FAM107BQ9H098 131 aa9.67□□□□□ -0.86
CTNND1-227ENST00000530748 RBM28Q9NW13 759 aaKnown RBP9.67□□□□□ -0.86
CTNND1-227ENST00000530748 CYLC1P35663 651 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-227ENST00000530748 LMBR1LQ6UX01 489 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms