RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 GPSM2P81274 684 aa26.62■■□□□ 1.85
CAPN1-220ENST00000530567 PUS3Q9BZE2 481 aaKnown RBP26.62■■□□□ 1.85
CAPN1-220ENST00000530567 SBF1O95248 1867 aa26.61■■□□□ 1.85
CAPN1-220ENST00000530567 ATP8B2P98198 1209 aa26.61■■□□□ 1.85
CAPN1-220ENST00000530567 GRIPAP1Q4V328 841 aa26.61■■□□□ 1.85
CAPN1-220ENST00000530567 TAOK3Q9H2K8 898 aa26.61■■□□□ 1.85
CAPN1-220ENST00000530567 FKBP4Q02790 459 aaKnown RBP eCLIP26.6■■□□□ 1.85
CAPN1-220ENST00000530567 POLA2Q14181 598 aa26.6■■□□□ 1.85
CAPN1-220ENST00000530567 LDHAL6AQ6ZMR3 332 aa26.6■■□□□ 1.85
CAPN1-220ENST00000530567 PSMD1Q99460 953 aa26.6■■□□□ 1.85
CAPN1-220ENST00000530567 MPNDQ8N594 471 aa26.59■■□□□ 1.85
CAPN1-220ENST00000530567 SSH3Q8TE77 659 aa26.59■■□□□ 1.85
CAPN1-220ENST00000530567 RTFDC1Q9BY42 306 aaPredicted RBP26.59■■□□□ 1.85
CAPN1-220ENST00000530567 TMX4Q9H1E5 349 aaPredicted RBP26.59■■□□□ 1.85
CAPN1-220ENST00000530567 COPRSQ9NQ92 184 aa26.59■■□□□ 1.85
CAPN1-220ENST00000530567 PODXL2Q9NZ53 605 aa26.59■■□□□ 1.85
CAPN1-220ENST00000530567 PA2G4Q9UQ80 394 aaKnown RBP26.59■■□□□ 1.85
CAPN1-220ENST00000530567 RIPOR2Q9Y4F9 1068 aa26.59■■□□□ 1.85
CAPN1-220ENST00000530567 LRRC24Q50LG9 513 aa26.58■■□□□ 1.85
CAPN1-220ENST00000530567 DPP8Q6V1X1 898 aaPredicted RBP26.58■■□□□ 1.85
CAPN1-220ENST00000530567 NSFL1CQ9UNZ2 370 aaKnown RBP26.58■■□□□ 1.85
CAPN1-220ENST00000530567 CHRNDQ07001 517 aa26.57■■□□□ 1.84
CAPN1-220ENST00000530567 SIRT2Q8IXJ6 389 aa26.57■■□□□ 1.84
CAPN1-220ENST00000530567 CNNM1Q9NRU3 951 aa26.57■■□□□ 1.84
CAPN1-220ENST00000530567 XDHP47989 1333 aa26.57■■□□□ 1.84
CAPN1-220ENST00000530567 CENPBP07199 599 aaPredicted RBP26.56■■□□□ 1.84
CAPN1-220ENST00000530567 CCDC88AQ3V6T2 1871 aa26.56■■□□□ 1.84
CAPN1-220ENST00000530567 EYA2O00167 538 aa26.56■■□□□ 1.84
CAPN1-220ENST00000530567 ATG9AQ7Z3C6 839 aa26.56■■□□□ 1.84
CAPN1-220ENST00000530567 ZNF277Q9NRM2 450 aaPredicted RBP26.56■■□□□ 1.84
CAPN1-220ENST00000530567 POLLQ9UGP5 575 aa26.56■■□□□ 1.84
CAPN1-220ENST00000530567 WTIPA6NIX2 430 aaPredicted RBP26.55■■□□□ 1.84
CAPN1-220ENST00000530567 TBC1D16Q8TBP0 767 aa26.55■■□□□ 1.84
CAPN1-220ENST00000530567 SIL1Q9H173 461 aa26.55■■□□□ 1.84
CAPN1-220ENST00000530567 ANKIB1Q9P2G1 1089 aa26.55■■□□□ 1.84
CAPN1-220ENST00000530567 COL4A5P29400 1685 aa26.54■■□□□ 1.84
CAPN1-220ENST00000530567 CIAO1O76071 339 aa26.54■■□□□ 1.84
CAPN1-220ENST00000530567 IRX6P78412 446 aaPredicted RBP26.54■■□□□ 1.84
CAPN1-220ENST00000530567 RPAP2Q8IXW5 612 aaPredicted RBP26.54■■□□□ 1.84
CAPN1-220ENST00000530567 HELBQ8NG08 1087 aaPredicted RBP26.54■■□□□ 1.84
CAPN1-220ENST00000530567 EXOC6Q8TAG9 804 aa26.54■■□□□ 1.84
CAPN1-220ENST00000530567 FBXO3Q9UK99 471 aa26.54■■□□□ 1.84
CAPN1-220ENST00000530567 CHD4Q14839 1912 aa26.54■■□□□ 1.84
CAPN1-220ENST00000530567 LMNB1P20700 586 aa26.53■■□□□ 1.84
CAPN1-220ENST00000530567 VGLL2Q8N8G2 317 aa26.53■■□□□ 1.84
CAPN1-220ENST00000530567 ANKRD2Q9GZV1 360 aa26.53■■□□□ 1.84
CAPN1-220ENST00000530567 TAF5LO75529 589 aa26.52■■□□□ 1.84
CAPN1-220ENST00000530567 UFL1O94874 794 aa26.52■■□□□ 1.84
CAPN1-220ENST00000530567 GPR101Q96P66 508 aaPredicted RBP26.52■■□□□ 1.84
CAPN1-220ENST00000530567 GGA1Q9UJY5 639 aa26.52■■□□□ 1.84
CAPN1-220ENST00000530567 PCDHB15Q9Y5E8 787 aa26.52■■□□□ 1.84
CAPN1-220ENST00000530567 DICER1Q9UPY3 1922 aaKnown RBP26.52■■□□□ 1.84
CAPN1-220ENST00000530567 MROH5Q6ZUA9 1318 aa26.52■■□□□ 1.84
CAPN1-220ENST00000530567 SNAP23O00161 211 aa26.51■■□□□ 1.83
CAPN1-220ENST00000530567 IARSP41252 1262 aaKnown RBP26.51■■□□□ 1.83
CAPN1-220ENST00000530567 SUPT20HQ8NEM7 779 aa26.51■■□□□ 1.83
CAPN1-220ENST00000530567 ATP2B4P23634 1241 aa26.5■■□□□ 1.83
CAPN1-220ENST00000530567 C9orf131Q5VYM1 1079 aa26.5■■□□□ 1.83
CAPN1-220ENST00000530567 C6orf229H3BNL8 230 aa26.49■■□□□ 1.83
CAPN1-220ENST00000530567 METTL24Q5JXM2 366 aa26.49■■□□□ 1.83
CAPN1-220ENST00000530567 LEMD3Q9Y2U8 911 aa26.49■■□□□ 1.83
CAPN1-220ENST00000530567 NOP58Q9Y2X3 529 aaKnown RBP26.49■■□□□ 1.83
CAPN1-220ENST00000530567 TIAM2Q8IVF5 1701 aa26.49■■□□□ 1.83
CAPN1-220ENST00000530567 IRS2Q9Y4H2 1338 aa26.49■■□□□ 1.83
CAPN1-220ENST00000530567 IL15P40933 162 aaPredicted RBP26.48■■□□□ 1.83
CAPN1-220ENST00000530567 KIAA2012Q0VF49 1180 aa26.48■■□□□ 1.83
CAPN1-220ENST00000530567 AOC3Q16853 763 aa26.48■■□□□ 1.83
CAPN1-220ENST00000530567 RNF181Q9P0P0 153 aa26.48■■□□□ 1.83
CAPN1-220ENST00000530567 ZNF804BA4D1E1 1349 aa26.48■■□□□ 1.83
CAPN1-220ENST00000530567 PPIP5K2O43314 1243 aa26.47■■□□□ 1.83
CAPN1-220ENST00000530567 PDE8BO95263 885 aa26.47■■□□□ 1.83
CAPN1-220ENST00000530567 KLRK1P26718 216 aa26.47■■□□□ 1.83
CAPN1-220ENST00000530567 AAMPQ13685 434 aa26.47■■□□□ 1.83
CAPN1-220ENST00000530567 VPS33BQ9H267 617 aa26.47■■□□□ 1.83
CAPN1-220ENST00000530567 MED23Q9ULK4 1368 aa26.46■■□□□ 1.83
CAPN1-220ENST00000530567 HMMRO75330 724 aa26.46■■□□□ 1.83
CAPN1-220ENST00000530567 SURF6O75683 361 aaKnown RBP26.46■■□□□ 1.83
CAPN1-220ENST00000530567 WASHC4Q2M389 1173 aa26.46■■□□□ 1.83
CAPN1-220ENST00000530567 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.46■■□□□ 1.83
CAPN1-220ENST00000530567 TXNRD3Q86VQ6 643 aa26.45■■□□□ 1.82
CAPN1-220ENST00000530567 LARGE2Q8N3Y3 721 aa26.45■■□□□ 1.82
CAPN1-220ENST00000530567 EYA3Q99504 573 aa26.45■■□□□ 1.82
CAPN1-220ENST00000530567 SASH1O94885 1247 aa26.44■■□□□ 1.82
CAPN1-220ENST00000530567 RIMBP2O15034 1052 aa26.43■■□□□ 1.82
CAPN1-220ENST00000530567 FGFR2P21802 821 aa26.43■■□□□ 1.82
CAPN1-220ENST00000530567 KCNJ4P48050 445 aa26.43■■□□□ 1.82
CAPN1-220ENST00000530567 G3BP1Q13283 466 aaKnown RBP eCLIP26.43■■□□□ 1.828e-6■■□□□ 11.5
CAPN1-220ENST00000530567 UBE4AQ14139 1066 aa26.43■■□□□ 1.82
CAPN1-220ENST00000530567 C15orf52Q6ZUT6 534 aaKnown RBP26.43■■□□□ 1.82
CAPN1-220ENST00000530567 CEP126Q9P2H0 1117 aa26.43■■□□□ 1.82
CAPN1-220ENST00000530567 EXOC6BQ9Y2D4 811 aa26.43■■□□□ 1.82
CAPN1-220ENST00000530567 TFCP2Q12800 502 aa26.42■■□□□ 1.82
CAPN1-220ENST00000530567 ZC3H12CQ9C0D7 883 aaKnown RBP26.42■■□□□ 1.82
CAPN1-220ENST00000530567 PUM3Q15397 648 aaKnown RBP26.41■■□□□ 1.82
CAPN1-220ENST00000530567 ARAP2Q8WZ64 1704 aa26.4■■□□□ 1.82
CAPN1-220ENST00000530567 ZC3H4Q9UPT8 1303 aaKnown RBP26.4■■□□□ 1.82
CAPN1-220ENST00000530567 NIM1KQ8IY84 436 aa26.39■■□□□ 1.82
CAPN1-220ENST00000530567 ZNF609O15014 1411 aa26.39■■□□□ 1.81
CAPN1-220ENST00000530567 FZD9O00144 591 aa26.39■■□□□ 1.81
CAPN1-220ENST00000530567 OS9Q13438 667 aaPredicted RBP26.39■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms