RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 BABAM1Q9NWV8 329 aa14.05□□□□□ -0.16
TM9SF1-210ENST00000530563 GGA3Q9NZ52 723 aa14.05□□□□□ -0.16
TM9SF1-210ENST00000530563 SCN9AQ15858 1988 aa14.05□□□□□ -0.16
TM9SF1-210ENST00000530563 AKAP11Q9UKA4 1901 aa14.04□□□□□ -0.16
TM9SF1-210ENST00000530563 C6orf229H3BNL8 230 aa14.04□□□□□ -0.16
TM9SF1-210ENST00000530563 ZNF280AP59817 542 aaPredicted RBP14.04□□□□□ -0.16
TM9SF1-210ENST00000530563 KIF4BQ2VIQ3 1234 aa14.04□□□□□ -0.16
TM9SF1-210ENST00000530563 NECTIN2Q92692 538 aa14.04□□□□□ -0.16
TM9SF1-210ENST00000530563 FAM89AQ96GI7 184 aa14.04□□□□□ -0.16
TM9SF1-210ENST00000530563 ISCA1Q9BUE6 129 aa14.04□□□□□ -0.16
TM9SF1-210ENST00000530563 NEFMP07197 916 aa14.03□□□□□ -0.16
TM9SF1-210ENST00000530563 SULF1Q8IWU6 871 aa14.03□□□□□ -0.16
TM9SF1-210ENST00000530563 REM2Q8IYK8 340 aaPredicted RBP14.03□□□□□ -0.16
TM9SF1-210ENST00000530563 GMLQ99445 158 aa14.03□□□□□ -0.16
TM9SF1-210ENST00000530563 PODXL2Q9NZ53 605 aa14.03□□□□□ -0.16
TM9SF1-210ENST00000530563 ZNF609O15014 1411 aa14.03□□□□□ -0.16
TM9SF1-210ENST00000530563 SCARF1Q14162 830 aa14.02□□□□□ -0.17
TM9SF1-210ENST00000530563 KRT24Q2M2I5 525 aa14.02□□□□□ -0.17
TM9SF1-210ENST00000530563 RPS8P62241 208 aaKnown RBP14.01□□□□□ -0.17
TM9SF1-210ENST00000530563 FKBP1BP68106 108 aa14.01□□□□□ -0.17
TM9SF1-210ENST00000530563 ANGEL2Q5VTE6 544 aaKnown RBP14.01□□□□□ -0.17
TM9SF1-210ENST00000530563 MOB2Q70IA6 237 aa14.01□□□□□ -0.17
TM9SF1-210ENST00000530563 PLBD2Q8NHP8 589 aa14.01□□□□□ -0.17
TM9SF1-210ENST00000530563 ZNF296Q8WUU4 475 aaPredicted RBP14.01□□□□□ -0.17
TM9SF1-210ENST00000530563 EYA3Q99504 573 aa14.01□□□□□ -0.17
TM9SF1-210ENST00000530563 ATP5J2-PTCD1G3V325 749 aa14□□□□□ -0.17
TM9SF1-210ENST00000530563 TBC1D8O95759 1140 aa14□□□□□ -0.17
TM9SF1-210ENST00000530563 RIPK4P57078 832 aa14□□□□□ -0.17
TM9SF1-210ENST00000530563 TRIM28Q13263 835 aaKnown RBP14□□□□□ -0.17
TM9SF1-210ENST00000530563 PKN2Q16513 984 aaKnown RBP14□□□□□ -0.17
TM9SF1-210ENST00000530563 CHL1O00533 1208 aa13.99□□□□□ -0.17
TM9SF1-210ENST00000530563 TM4SF4P48230 202 aa13.99□□□□□ -0.17
TM9SF1-210ENST00000530563 NOM1Q5C9Z4 860 aaKnown RBP13.99□□□□□ -0.17
TM9SF1-210ENST00000530563 RSBN1LQ6PCB5 846 aaPredicted RBP13.99□□□□□ -0.17
TM9SF1-210ENST00000530563 ANKRD13DQ6ZTN6 518 aa13.99□□□□□ -0.17
TM9SF1-210ENST00000530563 AGBL3Q8NEM8 1001 aa13.99□□□□□ -0.17
TM9SF1-210ENST00000530563 ZC3H12CQ9C0D7 883 aaKnown RBP13.99□□□□□ -0.17
TM9SF1-210ENST00000530563 CHPF2Q9P2E5 772 aa13.99□□□□□ -0.17
TM9SF1-210ENST00000530563 PAPPA2Q9BXP8 1791 aa13.99□□□□□ -0.17
TM9SF1-210ENST00000530563 PITPNM2Q9BZ72 1349 aa13.98□□□□□ -0.17
TM9SF1-210ENST00000530563 MAPK8IP3Q9UPT6 1336 aa13.98□□□□□ -0.17
TM9SF1-210ENST00000530563 UBE2Q2LH0YL09 131 aa13.98□□□□□ -0.17
TM9SF1-210ENST00000530563 PNNQ9H307 717 aaKnown RBP13.98□□□□□ -0.17
TM9SF1-210ENST00000530563 R3HDMLQ9H3Y0 253 aa13.98□□□□□ -0.17
TM9SF1-210ENST00000530563 SEC31BQ9NQW1 1179 aa13.98□□□□□ -0.17
TM9SF1-210ENST00000530563 SCAF8Q9UPN6 1271 aaKnown RBP13.98□□□□□ -0.17
TM9SF1-210ENST00000530563 IRS4O14654 1257 aaPredicted RBP13.97□□□□□ -0.17
TM9SF1-210ENST00000530563 TMPOP42166 694 aaKnown RBP13.97□□□□□ -0.17
TM9SF1-210ENST00000530563 RTL5Q5HYW3 569 aaPredicted RBP13.97□□□□□ -0.17
TM9SF1-210ENST00000530563 MYOZ2Q9NPC6 264 aa13.97□□□□□ -0.17
TM9SF1-210ENST00000530563 SZT2Q5T011 3432 aa13.97□□□□□ -0.17
TM9SF1-210ENST00000530563 WTIPA6NIX2 430 aaPredicted RBP13.96□□□□□ -0.17
TM9SF1-210ENST00000530563 GPR25O00155 361 aa13.96□□□□□ -0.17
TM9SF1-210ENST00000530563 UFL1O94874 794 aa13.96□□□□□ -0.17
TM9SF1-210ENST00000530563 USP17L8P0C7I0 530 aa13.96□□□□□ -0.17
TM9SF1-210ENST00000530563 PRAMEF18Q5VWM3 479 aa13.96□□□□□ -0.17
TM9SF1-210ENST00000530563 CFHR5Q9BXR6 569 aa13.96□□□□□ -0.17
TM9SF1-210ENST00000530563 PSME4Q14997 1843 aa13.95□□□□□ -0.18
TM9SF1-210ENST00000530563 NBPF9Q3BBW0 867 aa13.95□□□□□ -0.18
TM9SF1-210ENST00000530563 FBXO46Q6PJ61 603 aaPredicted RBP13.95□□□□□ -0.18
TM9SF1-210ENST00000530563 GGA1Q9UJY5 639 aa13.95□□□□□ -0.18
TM9SF1-210ENST00000530563 HDAC9Q9UKV0 1011 aa13.95□□□□□ -0.18
TM9SF1-210ENST00000530563 HDGFL1Q5TGJ6 251 aa13.94□□□□□ -0.18
TM9SF1-210ENST00000530563 ZBTB38Q8NAP3 1195 aaPredicted RBP13.94□□□□□ -0.18
TM9SF1-210ENST00000530563 ANKIB1Q9P2G1 1089 aa13.94□□□□□ -0.18
TM9SF1-210ENST00000530563 DBF4Q9UBU7 674 aaPredicted RBP13.94□□□□□ -0.18
TM9SF1-210ENST00000530563 TRIM35Q9UPQ4 493 aa13.94□□□□□ -0.18
TM9SF1-210ENST00000530563 RANBP2P49792 3224 aaKnown RBP13.93□□□□□ -0.18
TM9SF1-210ENST00000530563 USP17L3A6NCW0 530 aa13.93□□□□□ -0.18
TM9SF1-210ENST00000530563 USP17L4A6NCW7 530 aa13.93□□□□□ -0.18
TM9SF1-210ENST00000530563 HOXB7P09629 217 aa13.93□□□□□ -0.18
TM9SF1-210ENST00000530563 USP17L1Q7RTZ2 530 aa13.93□□□□□ -0.18
TM9SF1-210ENST00000530563 PODNQ7Z5L7 613 aa13.93□□□□□ -0.18
TM9SF1-210ENST00000530563 PTPN12Q05209 780 aaKnown RBP13.92□□□□□ -0.18
TM9SF1-210ENST00000530563 LMOD3Q0VAK6 560 aa13.92□□□□□ -0.18
TM9SF1-210ENST00000530563 HABP4Q5JVS0 413 aaKnown RBP13.92□□□□□ -0.18
TM9SF1-210ENST00000530563 DACT2Q5SW24 774 aa13.92□□□□□ -0.18
TM9SF1-210ENST00000530563 LDLRAD1Q5T700 205 aa13.92□□□□□ -0.18
TM9SF1-210ENST00000530563 MXD3Q9BW11 206 aa13.92□□□□□ -0.18
TM9SF1-210ENST00000530563 HYPKQ9NX55 129 aa13.92□□□□□ -0.18
TM9SF1-210ENST00000530563 ZNF646O15015 1829 aaPredicted RBP13.92□□□□□ -0.18
TM9SF1-210ENST00000530563 WNT10BO00744 389 aa13.91□□□□□ -0.18
TM9SF1-210ENST00000530563 FKTNO75072 461 aa13.91□□□□□ -0.18
TM9SF1-210ENST00000530563 MKRN3Q13064 507 aaKnown RBP13.91□□□□□ -0.18
TM9SF1-210ENST00000530563 A0A0C4DFX4 3053 aa13.91□□□□□ -0.18
TM9SF1-210ENST00000530563 XDHP47989 1333 aa13.9□□□□□ -0.18
TM9SF1-210ENST00000530563 G3V3G9 751 aa13.9□□□□□ -0.18
TM9SF1-210ENST00000530563 PCCAP05165 728 aaPredicted RBP13.9□□□□□ -0.18
TM9SF1-210ENST00000530563 DCAF8Q5TAQ9 597 aa13.9□□□□□ -0.18
TM9SF1-210ENST00000530563 JARID2Q92833 1246 aaPredicted RBP13.9□□□□□ -0.18
TM9SF1-210ENST00000530563 GCC1Q96CN9 775 aa13.9□□□□□ -0.18
TM9SF1-210ENST00000530563 ZBED3Q96IU2 234 aaPredicted RBP13.9□□□□□ -0.18
TM9SF1-210ENST00000530563 POTEFA5A3E0 1075 aa13.89□□□□□ -0.19
TM9SF1-210ENST00000530563 ATP2B4P23634 1241 aa13.89□□□□□ -0.19
TM9SF1-210ENST00000530563 CCDC152Q4G0S7 254 aa13.89□□□□□ -0.19
TM9SF1-210ENST00000530563 DUSP27Q5VZP5 1158 aa13.89□□□□□ -0.19
TM9SF1-210ENST00000530563 SPRYD7Q5W111 196 aa13.89□□□□□ -0.19
TM9SF1-210ENST00000530563 PHAXQ9H814 394 aaKnown RBP13.89□□□□□ -0.19
TM9SF1-210ENST00000530563 PDE8AO60658 829 aa13.88□□□□□ -0.19
TM9SF1-210ENST00000530563 SREBF2Q12772 1141 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms