RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 TSPYL6Q8N831 410 aa26.81■■□□□ 1.88
TSPAN4-219ENST00000530404 TBC1D16Q8TBP0 767 aa26.81■■□□□ 1.88
TSPAN4-219ENST00000530404 EGFRP00533 1210 aa26.8■■□□□ 1.88
TSPAN4-219ENST00000530404 RTL9Q8NET4 1388 aa26.8■■□□□ 1.88
TSPAN4-219ENST00000530404 TBC1D10BQ4KMP7 808 aaPredicted RBP26.79■■□□□ 1.88
TSPAN4-219ENST00000530404 SAPCD2Q86UD0 394 aa26.79■■□□□ 1.88
TSPAN4-219ENST00000530404 ZC3H15Q8WU90 426 aaKnown RBP26.79■■□□□ 1.88
TSPAN4-219ENST00000530404 EYA3Q99504 573 aa26.79■■□□□ 1.88
TSPAN4-219ENST00000530404 PCCAP05165 728 aaPredicted RBP26.78■■□□□ 1.88
TSPAN4-219ENST00000530404 USP48Q86UV5 1035 aa26.78■■□□□ 1.88
TSPAN4-219ENST00000530404 CCDC191Q8NCU4 936 aa26.78■■□□□ 1.88
TSPAN4-219ENST00000530404 TSR2Q969E8 191 aaKnown RBP26.78■■□□□ 1.88
TSPAN4-219ENST00000530404 CWC25Q9NXE8 425 aaPredicted RBP26.78■■□□□ 1.88
TSPAN4-219ENST00000530404 CACNA1FO60840 1977 aa26.78■■□□□ 1.88
TSPAN4-219ENST00000530404 RBM26Q5T8P6 1007 aaKnown RBP26.77■■□□□ 1.88
TSPAN4-219ENST00000530404 CCDC30Q5VVM6 783 aa26.77■■□□□ 1.88
TSPAN4-219ENST00000530404 CDC37L1Q7L3B6 337 aa26.77■■□□□ 1.88
TSPAN4-219ENST00000530404 DPF2Q92785 391 aa26.77■■□□□ 1.88
TSPAN4-219ENST00000530404 METTL22Q9BUU2 404 aaPredicted RBP26.77■■□□□ 1.88
TSPAN4-219ENST00000530404 TSKSQ9UJT2 592 aa26.77■■□□□ 1.88
TSPAN4-219ENST00000530404 PDE8AO60658 829 aa26.76■■□□□ 1.87
TSPAN4-219ENST00000530404 UFL1O94874 794 aa26.76■■□□□ 1.87
TSPAN4-219ENST00000530404 ANKIB1Q9P2G1 1089 aa26.76■■□□□ 1.87
TSPAN4-219ENST00000530404 MAP3K2Q9Y2U5 619 aa26.76■■□□□ 1.87
TSPAN4-219ENST00000530404 ZNF646O15015 1829 aaPredicted RBP26.75■■□□□ 1.87
TSPAN4-219ENST00000530404 CCDC152Q4G0S7 254 aa26.75■■□□□ 1.87
TSPAN4-219ENST00000530404 BEGAINQ9BUH8 593 aa26.75■■□□□ 1.87
TSPAN4-219ENST00000530404 DDX58O95786 925 aaKnown RBP26.74■■□□□ 1.87
TSPAN4-219ENST00000530404 ZC3H12CQ9C0D7 883 aaKnown RBP26.74■■□□□ 1.87
TSPAN4-219ENST00000530404 PODXL2Q9NZ53 605 aa26.74■■□□□ 1.87
TSPAN4-219ENST00000530404 GGA1Q9UJY5 639 aa26.73■■□□□ 1.87
TSPAN4-219ENST00000530404 G3V3G9 751 aa26.72■■□□□ 1.87
TSPAN4-219ENST00000530404 HSP90B1P14625 803 aaKnown RBP26.72■■□□□ 1.87
TSPAN4-219ENST00000530404 DCAF8Q5TAQ9 597 aa26.72■■□□□ 1.87
TSPAN4-219ENST00000530404 AKAP11Q9UKA4 1901 aa26.72■■□□□ 1.87
TSPAN4-219ENST00000530404 PI4KAP2A4QPH2 592 aa26.71■■□□□ 1.87
TSPAN4-219ENST00000530404 ADM5C9JUS6 153 aa26.71■■□□□ 1.87
TSPAN4-219ENST00000530404 IGKV5-2P06315 115 aa26.71■■□□□ 1.87
TSPAN4-219ENST00000530404 RPS12P25398 132 aaKnown RBP26.71■■□□□ 1.87
TSPAN4-219ENST00000530404 PI4KAP1Q8N8J0 262 aa26.71■■□□□ 1.87
TSPAN4-219ENST00000530404 MAP2K2P36507 400 aa26.7■■□□□ 1.86
TSPAN4-219ENST00000530404 KRT26Q7Z3Y9 468 aa26.7■■□□□ 1.86
TSPAN4-219ENST00000530404 ANKRD18AQ8IVF6 992 aa26.7■■□□□ 1.86
TSPAN4-219ENST00000530404 VIL1P09327 827 aaKnown RBP26.69■■□□□ 1.86
TSPAN4-219ENST00000530404 KIF4BQ2VIQ3 1234 aa26.69■■□□□ 1.86
TSPAN4-219ENST00000530404 KSR2Q6VAB6 950 aa26.69■■□□□ 1.86
TSPAN4-219ENST00000530404 G2E3Q7L622 706 aa26.69■■□□□ 1.86
TSPAN4-219ENST00000530404 HHIPL1Q96JK4 782 aa26.69■■□□□ 1.86
TSPAN4-219ENST00000530404 ASTN2O75129 1339 aaPredicted RBP26.68■■□□□ 1.86
TSPAN4-219ENST00000530404 CTSWP56202 376 aa26.68■■□□□ 1.86
TSPAN4-219ENST00000530404 HUNKP57058 714 aa26.68■■□□□ 1.86
TSPAN4-219ENST00000530404 CWF19L2Q2TBE0 894 aaKnown RBP26.68■■□□□ 1.86
TSPAN4-219ENST00000530404 ZIC5Q96T25 663 aa26.68■■□□□ 1.86
TSPAN4-219ENST00000530404 WTIPA6NIX2 430 aaPredicted RBP26.67■■□□□ 1.86
TSPAN4-219ENST00000530404 DCPSQ96C86 337 aaKnown RBP26.67■■□□□ 1.86
TSPAN4-219ENST00000530404 STK31Q9BXU1 1019 aa26.67■■□□□ 1.86
TSPAN4-219ENST00000530404 XDHP47989 1333 aa26.66■■□□□ 1.86
TSPAN4-219ENST00000530404 TWISTNBQ3B726 338 aaPredicted RBP26.66■■□□□ 1.86
TSPAN4-219ENST00000530404 WWC1Q8IX03 1113 aa26.66■■□□□ 1.86
TSPAN4-219ENST00000530404 ABHD8Q96I13 439 aa26.66■■□□□ 1.86
TSPAN4-219ENST00000530404 GREM2Q9H772 168 aa26.66■■□□□ 1.86
TSPAN4-219ENST00000530404 A0A1B0GUL6 1792 aa26.66■■□□□ 1.86
TSPAN4-219ENST00000530404 CHMP4AQ9BY43 222 aa26.65■■□□□ 1.86
TSPAN4-219ENST00000530404 GGA3Q9NZ52 723 aa26.65■■□□□ 1.86
TSPAN4-219ENST00000530404 NEXNQ0ZGT2 675 aa26.64■■□□□ 1.86
TSPAN4-219ENST00000530404 RSBN1LQ6PCB5 846 aaPredicted RBP26.64■■□□□ 1.86
TSPAN4-219ENST00000530404 TTLL11Q8NHH1 800 aa26.64■■□□□ 1.86
TSPAN4-219ENST00000530404 NEURL1BA8MQ27 555 aa26.63■■□□□ 1.85
TSPAN4-219ENST00000530404 ATP2B4P23634 1241 aa26.63■■□□□ 1.85
TSPAN4-219ENST00000530404 BRPF1P55201 1214 aaPredicted RBP26.63■■□□□ 1.85
TSPAN4-219ENST00000530404 CDC5LQ99459 802 aaKnown RBP26.63■■□□□ 1.85
TSPAN4-219ENST00000530404 GBA2Q9HCG7 927 aaPredicted RBP26.63■■□□□ 1.85
TSPAN4-219ENST00000530404 SLC4A2P04920 1241 aa26.62■■□□□ 1.85
TSPAN4-219ENST00000530404 CCDC27Q2M243 656 aa26.62■■□□□ 1.85
TSPAN4-219ENST00000530404 UBE3BQ7Z3V4 1068 aa26.61■■□□□ 1.85
TSPAN4-219ENST00000530404 SALL2Q9Y467 1007 aaPredicted RBP26.61■■□□□ 1.85
TSPAN4-219ENST00000530404 ZNF609O15014 1411 aa26.6■■□□□ 1.85
TSPAN4-219ENST00000530404 SCARF1Q14162 830 aa26.6■■□□□ 1.85
TSPAN4-219ENST00000530404 RGMBQ6NW40 437 aa26.6■■□□□ 1.85
TSPAN4-219ENST00000530404 SULF1Q8IWU6 871 aa26.6■■□□□ 1.85
TSPAN4-219ENST00000530404 C2orf69Q8N8R5 385 aa26.6■■□□□ 1.85
TSPAN4-219ENST00000530404 AGBL3Q8NEM8 1001 aa26.6■■□□□ 1.85
TSPAN4-219ENST00000530404 MINPP1Q9UNW1 487 aa26.6■■□□□ 1.85
TSPAN4-219ENST00000530404 SCAF8Q9UPN6 1271 aaKnown RBP26.6■■□□□ 1.85
TSPAN4-219ENST00000530404 ZNF280AP59817 542 aaPredicted RBP26.59■■□□□ 1.85
TSPAN4-219ENST00000530404 NOGQ13253 232 aa26.59■■□□□ 1.85
TSPAN4-219ENST00000530404 ANGEL2Q5VTE6 544 aaKnown RBP26.59■■□□□ 1.85
TSPAN4-219ENST00000530404 BSDC1Q9NW68 430 aaPredicted RBP26.59■■□□□ 1.85
TSPAN4-219ENST00000530404 FAM155AB1AL88 458 aaPredicted RBP26.58■■□□□ 1.85
TSPAN4-219ENST00000530404 H7C1W4 665 aa26.58■■□□□ 1.85
TSPAN4-219ENST00000530404 CDCA5Q96FF9 252 aa26.58■■□□□ 1.85
TSPAN4-219ENST00000530404 GMLQ99445 158 aa26.58■■□□□ 1.85
TSPAN4-219ENST00000530404 MXD3Q9BW11 206 aa26.58■■□□□ 1.85
TSPAN4-219ENST00000530404 MED23Q9ULK4 1368 aa26.58■■□□□ 1.84
TSPAN4-219ENST00000530404 USP17L3A6NCW0 530 aa26.57■■□□□ 1.84
TSPAN4-219ENST00000530404 USP17L4A6NCW7 530 aa26.57■■□□□ 1.84
TSPAN4-219ENST00000530404 CA12O43570 354 aa26.57■■□□□ 1.84
TSPAN4-219ENST00000530404 FLIIQ13045 1269 aa26.57■■□□□ 1.84
TSPAN4-219ENST00000530404 USP17L1Q7RTZ2 530 aa26.57■■□□□ 1.84
TSPAN4-219ENST00000530404 FBXW7Q969H0 707 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms