RNA–Protein interactions for RNA: ENST00000530262.5

MACF1-229, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 6,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-229ENST00000530262 ORC3Q9UBD5 711 aaPredicted RBP8.36□□□□□ -1.07
MACF1-229ENST00000530262 CDC42BPBQ9Y5S2 1711 aa8.36□□□□□ -1.07
MACF1-229ENST00000530262 PI4KAP2A4QPH2 592 aa8.36□□□□□ -1.07
MACF1-229ENST00000530262 PPP4R3BQ5MIZ7 849 aa8.36□□□□□ -1.07
MACF1-229ENST00000530262 CEP135Q66GS9 1140 aa8.36□□□□□ -1.07
MACF1-229ENST00000530262 PI4KAP1Q8N8J0 262 aa8.36□□□□□ -1.07
MACF1-229ENST00000530262 ABCA9Q8IUA7 1624 aa8.36□□□□□ -1.07
MACF1-229ENST00000530262 ZNF165P49910 485 aa8.36□□□□□ -1.07
MACF1-229ENST00000530262 CCDC40Q4G0X9 1142 aa8.36□□□□□ -1.07
MACF1-229ENST00000530262 DDX12PQ92771 950 aa8.36□□□□□ -1.07
MACF1-229ENST00000530262 SNX21Q969T3 373 aa8.36□□□□□ -1.07
MACF1-229ENST00000530262 GOPCQ9HD26 462 aa8.36□□□□□ -1.07
MACF1-229ENST00000530262 EDC4Q6P2E9 1401 aaKnown RBP8.35□□□□□ -1.07
MACF1-229ENST00000530262 CCDC172P0C7W6 258 aa8.35□□□□□ -1.07
MACF1-229ENST00000530262 GIGYF2Q6Y7W6 1299 aaKnown RBP8.35□□□□□ -1.07
MACF1-229ENST00000530262 TMTC2Q8N394 836 aa8.35□□□□□ -1.07
MACF1-229ENST00000530262 GIMAP7Q8NHV1 300 aa8.35□□□□□ -1.07
MACF1-229ENST00000530262 CNNM2Q9H8M5 875 aa8.35□□□□□ -1.07
MACF1-229ENST00000530262 STAMBPO95630 424 aa8.35□□□□□ -1.07
MACF1-229ENST00000530262 IGHDP01880 384 aa8.35□□□□□ -1.07
MACF1-229ENST00000530262 CKAP4Q07065 602 aaKnown RBP8.35□□□□□ -1.07
MACF1-229ENST00000530262 NBPF6Q5VWK0 638 aa8.35□□□□□ -1.07
MACF1-229ENST00000530262 NBPF5PQ86XG9 351 aaPredicted RBP8.35□□□□□ -1.07
MACF1-229ENST00000530262 KCNG4Q8TDN1 519 aa8.35□□□□□ -1.07
MACF1-229ENST00000530262 NBPF4Q96M43 638 aa8.35□□□□□ -1.07
MACF1-229ENST00000530262 C16orf45Q96MC5 204 aaPredicted RBP8.35□□□□□ -1.07
MACF1-229ENST00000530262 CCDC113Q9H0I3 377 aa8.35□□□□□ -1.07
MACF1-229ENST00000530262 ARHGEF10O15013 1369 aa8.35□□□□□ -1.07
MACF1-229ENST00000530262 GSTTP1A0A1W2PQM5 241 aa8.35□□□□□ -1.07
MACF1-229ENST00000530262 UBE3BQ7Z3V4 1068 aa8.35□□□□□ -1.07
MACF1-229ENST00000530262 HOOK3Q86VS8 718 aa8.35□□□□□ -1.07
MACF1-229ENST00000530262 PCDH11XQ9BZA7 1347 aa8.35□□□□□ -1.07
MACF1-229ENST00000530262 PCDH11YQ9BZA8 1340 aa8.35□□□□□ -1.07
MACF1-229ENST00000530262 KIF1BO60333 1816 aa8.35□□□□□ -1.07
MACF1-229ENST00000530262 CBX1P83916 185 aa8.35□□□□□ -1.07
MACF1-229ENST00000530262 BMS1Q14692 1282 aaKnown RBP8.35□□□□□ -1.07
MACF1-229ENST00000530262 FAM182BQ5T319 152 aa8.35□□□□□ -1.07
MACF1-229ENST00000530262 XAGE3Q8WTP9 111 aa8.35□□□□□ -1.07
MACF1-229ENST00000530262 RHPN1Q8TCX5 695 aa8.34□□□□□ -1.07
MACF1-229ENST00000530262 CPLX3Q8WVH0 158 aa8.34□□□□□ -1.07
MACF1-229ENST00000530262 TMX3Q96JJ7 454 aa8.34□□□□□ -1.07
MACF1-229ENST00000530262 CRNKL1Q9BZJ0 848 aaKnown RBP8.34□□□□□ -1.07
MACF1-229ENST00000530262 TRMT1Q9NXH9 659 aaKnown RBP8.34□□□□□ -1.07
MACF1-229ENST00000530262 ALDH1L1O75891 902 aa8.34□□□□□ -1.07
MACF1-229ENST00000530262 CTR9Q6PD62 1173 aa8.34□□□□□ -1.07
MACF1-229ENST00000530262 COPS6Q7L5N1 327 aa8.34□□□□□ -1.07
MACF1-229ENST00000530262 SMARCC1Q92922 1105 aaPredicted RBP8.34□□□□□ -1.07
MACF1-229ENST00000530262 LDHAL6AQ6ZMR3 332 aa8.34□□□□□ -1.07
MACF1-229ENST00000530262 SCLT1Q96NL6 688 aa8.34□□□□□ -1.07
MACF1-229ENST00000530262 SLC26A6Q9BXS9 759 aa8.34□□□□□ -1.07
MACF1-229ENST00000530262 EXOC1Q9NV70 894 aa8.34□□□□□ -1.07
MACF1-229ENST00000530262 C6orf229H3BNL8 230 aa8.34□□□□□ -1.07
MACF1-229ENST00000530262 HLA-DOAP06340 250 aa8.34□□□□□ -1.07
MACF1-229ENST00000530262 UBA7P41226 1012 aa8.34□□□□□ -1.07
MACF1-229ENST00000530262 PRIM1P49642 420 aaKnown RBP8.34□□□□□ -1.07
MACF1-229ENST00000530262 RBM25P49756 843 aaKnown RBP8.34□□□□□ -1.07
MACF1-229ENST00000530262 SHROOM2Q13796 1616 aa8.34□□□□□ -1.07
MACF1-229ENST00000530262 TSPY2A6NKD2 308 aa8.33□□□□□ -1.08
MACF1-229ENST00000530262 GNPATO15228 680 aa8.33□□□□□ -1.08
MACF1-229ENST00000530262 SYKP43405 635 aa8.33□□□□□ -1.08
MACF1-229ENST00000530262 TRAF1Q13077 416 aa8.33□□□□□ -1.08
MACF1-229ENST00000530262 FERMT2Q96AC1 680 aa8.33□□□□□ -1.08
MACF1-229ENST00000530262 ESYT1Q9BSJ8 1104 aa8.33□□□□□ -1.08
MACF1-229ENST00000530262 TFIP11Q9UBB9 837 aaKnown RBP8.33□□□□□ -1.08
MACF1-229ENST00000530262 SDSP20132 328 aa8.33□□□□□ -1.08
MACF1-229ENST00000530262 SPAG1Q07617 926 aa8.33□□□□□ -1.08
MACF1-229ENST00000530262 ANKRD44Q8N8A2 993 aa8.33□□□□□ -1.08
MACF1-229ENST00000530262 C8orf58Q8NAV2 365 aa8.33□□□□□ -1.08
MACF1-229ENST00000530262 GTPBP4Q9BZE4 634 aaKnown RBP8.33□□□□□ -1.08
MACF1-229ENST00000530262 WTAPQ15007 396 aa8.33□□□□□ -1.08
MACF1-229ENST00000530262 CCDC152Q4G0S7 254 aa8.33□□□□□ -1.08
MACF1-229ENST00000530262 CCDC82Q8N4S0 544 aa8.33□□□□□ -1.08
MACF1-229ENST00000530262 ZGPATQ8N5A5 531 aaKnown RBP8.33□□□□□ -1.08
MACF1-229ENST00000530262 ERMNQ8TAM6 284 aa8.33□□□□□ -1.08
MACF1-229ENST00000530262 CTNNBL1Q8WYA6 563 aaPredicted RBP8.33□□□□□ -1.08
MACF1-229ENST00000530262 MAP3K5Q99683 1374 aa8.33□□□□□ -1.08
MACF1-229ENST00000530262 NBPF7P0C2Y1 421 aaPredicted RBP8.33□□□□□ -1.08
MACF1-229ENST00000530262 MRPL50Q8N5N7 158 aaKnown RBP8.33□□□□□ -1.08
MACF1-229ENST00000530262 BIN1O00499 593 aa8.33□□□□□ -1.08
MACF1-229ENST00000530262 RNMTO43148 476 aaKnown RBP8.33□□□□□ -1.08
MACF1-229ENST00000530262 ANKRD13DQ6ZTN6 518 aa8.33□□□□□ -1.08
MACF1-229ENST00000530262 DDX46Q7L014 1031 aaKnown RBP8.33□□□□□ -1.08
MACF1-229ENST00000530262 BBXQ8WY36 941 aaPredicted RBP8.33□□□□□ -1.08
MACF1-229ENST00000530262 DCAF5Q96JK2 942 aa8.33□□□□□ -1.08
MACF1-229ENST00000530262 PUS7Q96PZ0 661 aaKnown RBP8.33□□□□□ -1.08
MACF1-229ENST00000530262 NIP7Q9Y221 180 aaKnown RBP eCLIP8.33□□□□□ -1.08
MACF1-229ENST00000530262 POLR3AO14802 1390 aaPredicted RBP8.33□□□□□ -1.08
MACF1-229ENST00000530262 TTC41PQ6P2S7 1318 aa8.33□□□□□ -1.08
MACF1-229ENST00000530262 CCDC175P0C221 793 aa8.32□□□□□ -1.08
MACF1-229ENST00000530262 KDM5CP41229 1560 aa8.32□□□□□ -1.08
MACF1-229ENST00000530262 SETDB2Q96T68 719 aa8.32□□□□□ -1.08
MACF1-229ENST00000530262 GDPD2Q9HCC8 539 aa8.32□□□□□ -1.08
MACF1-229ENST00000530262 CABP5Q9NP86 173 aa8.32□□□□□ -1.08
MACF1-229ENST00000530262 BCCIPQ9P287 314 aaKnown RBP eCLIP8.32□□□□□ -1.08
MACF1-229ENST00000530262 RBM27Q9P2N5 1060 aaKnown RBP8.32□□□□□ -1.08
MACF1-229ENST00000530262 CCNL1Q9UK58 526 aaPredicted RBP8.32□□□□□ -1.08
MACF1-229ENST00000530262 SBNO1A3KN83 1393 aa8.32□□□□□ -1.08
MACF1-229ENST00000530262 ZFYVE9O95405 1425 aa8.32□□□□□ -1.08
MACF1-229ENST00000530262 WDHD1O75717 1129 aaPredicted RBP8.32□□□□□ -1.08
MACF1-229ENST00000530262 CYLC1P35663 651 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms