RNA–Protein interactions for RNA: ENST00000530164.5

RPS3-214, Transcript of ribosomal protein S3, humanhuman

TSL 1 (best) BASIC

Gene RPS3, Length 1,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-214ENST00000530164 GJA3Q9Y6H8 435 aa11.66□□□□□ -0.54
RPS3-214ENST00000530164 EPS15P42566 896 aa11.65□□□□□ -0.54
RPS3-214ENST00000530164 SCNN1DP51172 638 aa11.65□□□□□ -0.54
RPS3-214ENST00000530164 GRIPAP1Q4V328 841 aa11.65□□□□□ -0.54
RPS3-214ENST00000530164 ANKRD45Q5TZF3 282 aa11.65□□□□□ -0.54
RPS3-214ENST00000530164 CST9Q5W186 159 aa11.65□□□□□ -0.54
RPS3-214ENST00000530164 TBC1D9Q6ZT07 1266 aa11.65□□□□□ -0.54
RPS3-214ENST00000530164 PAXIP1Q6ZW49 1069 aaPredicted RBP11.65□□□□□ -0.54
RPS3-214ENST00000530164 TNPO1Q92973 898 aaKnown RBP11.65□□□□□ -0.54
RPS3-214ENST00000530164 GRPEL1Q9HAV7 217 aa11.65□□□□□ -0.54
RPS3-214ENST00000530164 MBIPQ9NS73 344 aa11.65□□□□□ -0.54
RPS3-214ENST00000530164 SNED1Q8TER0 1413 aa11.65□□□□□ -0.55
RPS3-214ENST00000530164 MAP2K2P36507 400 aa11.64□□□□□ -0.55
RPS3-214ENST00000530164 HLFQ16534 295 aa11.64□□□□□ -0.55
RPS3-214ENST00000530164 TWISTNBQ3B726 338 aaPredicted RBP11.64□□□□□ -0.55
RPS3-214ENST00000530164 INTS3Q68E01 1043 aaKnown RBP11.64□□□□□ -0.55
RPS3-214ENST00000530164 CYP4F22Q6NT55 531 aa11.64□□□□□ -0.55
RPS3-214ENST00000530164 USP50Q70EL3 339 aaPredicted RBP11.64□□□□□ -0.55
RPS3-214ENST00000530164 SIPA1L3O60292 1781 aaPredicted RBP11.64□□□□□ -0.55
RPS3-214ENST00000530164 BCORQ6W2J9 1755 aa11.64□□□□□ -0.55
RPS3-214ENST00000530164 FMR1Q06787 632 aaKnown RBP eCLIP11.63□□□□□ -0.55
RPS3-214ENST00000530164 GRM1Q13255 1194 aa11.63□□□□□ -0.55
RPS3-214ENST00000530164 RABEP1Q15276 862 aa11.63□□□□□ -0.55
RPS3-214ENST00000530164 SIRT2Q8IXJ6 389 aa11.63□□□□□ -0.55
RPS3-214ENST00000530164 RTF1Q92541 710 aaKnown RBP11.63□□□□□ -0.55
RPS3-214ENST00000530164 NYXQ9GZU5 481 aa11.63□□□□□ -0.55
RPS3-214ENST00000530164 DCTPP1Q9H773 170 aa11.63□□□□□ -0.55
RPS3-214ENST00000530164 PCDH10Q9P2E7 1040 aa11.63□□□□□ -0.55
RPS3-214ENST00000530164 TLL2Q9Y6L7 1015 aa11.63□□□□□ -0.55
RPS3-214ENST00000530164 HOXA10P31260 410 aaPredicted RBP11.63□□□□□ -0.55
RPS3-214ENST00000530164 LARGE2Q8N3Y3 721 aa11.63□□□□□ -0.55
RPS3-214ENST00000530164 SPRYD3Q8NCJ5 442 aa11.63□□□□□ -0.55
RPS3-214ENST00000530164 CA12O43570 354 aa11.62□□□□□ -0.55
RPS3-214ENST00000530164 THUMPD2Q9BTF0 503 aaKnown RBP11.62□□□□□ -0.55
RPS3-214ENST00000530164 ERVV-1B6SEH8 477 aa11.61□□□□□ -0.55
RPS3-214ENST00000530164 TRAF5O00463 557 aa11.61□□□□□ -0.55
RPS3-214ENST00000530164 MCM10Q7L590 875 aa11.61□□□□□ -0.55
RPS3-214ENST00000530164 SAPCD2Q86UD0 394 aa11.61□□□□□ -0.55
RPS3-214ENST00000530164 NUTM1Q86Y26 1132 aa11.61□□□□□ -0.55
RPS3-214ENST00000530164 RPAP2Q8IXW5 612 aaPredicted RBP11.61□□□□□ -0.55
RPS3-214ENST00000530164 TSPYL6Q8N831 410 aa11.61□□□□□ -0.55
RPS3-214ENST00000530164 ANKRD44Q8N8A2 993 aa11.61□□□□□ -0.55
RPS3-214ENST00000530164 RPGRQ92834 1020 aaKnown RBP11.61□□□□□ -0.55
RPS3-214ENST00000530164 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.61□□□□□ -0.55
RPS3-214ENST00000530164 PTPRCP08575 1304 aa11.61□□□□□ -0.55
RPS3-214ENST00000530164 GOLGA6L22H0YM25 854 aa11.61□□□□□ -0.55
RPS3-214ENST00000530164 TTC22Q5TAA0 569 aa11.61□□□□□ -0.55
RPS3-214ENST00000530164 U3KPZ7 1027 aaPredicted RBP11.61□□□□□ -0.55
RPS3-214ENST00000530164 DCTN1Q14203 1278 aa11.6□□□□□ -0.55
RPS3-214ENST00000530164 PLEKHM2Q8IWE5 1019 aa11.6□□□□□ -0.55
RPS3-214ENST00000530164 NIM1KQ8IY84 436 aa11.6□□□□□ -0.55
RPS3-214ENST00000530164 HHIPL1Q96JK4 782 aa11.6□□□□□ -0.55
RPS3-214ENST00000530164 CRAMP1Q96RY5 1269 aa11.6□□□□□ -0.55
RPS3-214ENST00000530164 ADARB2Q9NS39 739 aaKnown RBP11.6□□□□□ -0.55
RPS3-214ENST00000530164 TSKSQ9UJT2 592 aa11.6□□□□□ -0.55
RPS3-214ENST00000530164 COL4A5P29400 1685 aa11.6□□□□□ -0.55
RPS3-214ENST00000530164 ABCC12Q96J65 1359 aa11.6□□□□□ -0.55
RPS3-214ENST00000530164 HTATSF1O43719 755 aaKnown RBP11.59□□□□□ -0.55
RPS3-214ENST00000530164 AOC2O75106 756 aa11.59□□□□□ -0.55
RPS3-214ENST00000530164 VPS33BQ9H267 617 aa11.59□□□□□ -0.55
RPS3-214ENST00000530164 GPRC5DQ9NZD1 345 aa11.59□□□□□ -0.55
RPS3-214ENST00000530164 THSD7BQ9C0I4 1608 aa11.59□□□□□ -0.55
RPS3-214ENST00000530164 GSPT1P15170 499 aaKnown RBP11.59□□□□□ -0.55
RPS3-214ENST00000530164 NUCB2P80303 420 aa11.59□□□□□ -0.55
RPS3-214ENST00000530164 TAF7Q15545 349 aaPredicted RBP11.59□□□□□ -0.55
RPS3-214ENST00000530164 KLHL40Q2TBA0 621 aa11.59□□□□□ -0.55
RPS3-214ENST00000530164 C8orf58Q8NAV2 365 aa11.59□□□□□ -0.55
RPS3-214ENST00000530164 RBM17Q96I25 401 aaKnown RBP11.59□□□□□ -0.55
RPS3-214ENST00000530164 PANK2Q9BZ23 570 aa11.59□□□□□ -0.55
RPS3-214ENST00000530164 MCOLN1Q9GZU1 580 aa11.59□□□□□ -0.55
RPS3-214ENST00000530164 GZF1Q9H116 711 aaPredicted RBP11.59□□□□□ -0.55
RPS3-214ENST00000530164 LTBP1Q14766 1721 aa11.59□□□□□ -0.55
RPS3-214ENST00000530164 MAP3K15Q6ZN16 1313 aa11.58□□□□□ -0.56
RPS3-214ENST00000530164 PPIP5K2O43314 1243 aa11.58□□□□□ -0.56
RPS3-214ENST00000530164 CELF2O95319 508 aaKnown RBP11.58□□□□□ -0.56
RPS3-214ENST00000530164 TMX4Q9H1E5 349 aaPredicted RBP11.58□□□□□ -0.56
RPS3-214ENST00000530164 CWC22Q9HCG8 908 aaKnown RBP11.58□□□□□ -0.56
RPS3-214ENST00000530164 CHL1O00533 1208 aa11.57□□□□□ -0.56
RPS3-214ENST00000530164 PPEF1O14829 653 aaPredicted RBP11.57□□□□□ -0.56
RPS3-214ENST00000530164 CYP2E1P05181 493 aaPredicted RBP11.57□□□□□ -0.56
RPS3-214ENST00000530164 HSP90AA1P07900 732 aaKnown RBP11.57□□□□□ -0.56
RPS3-214ENST00000530164 PRKCSHP14314 528 aaPredicted RBP11.57□□□□□ -0.56
RPS3-214ENST00000530164 C1orf115Q9H7X2 142 aa11.57□□□□□ -0.56
RPS3-214ENST00000530164 PGAP2Q9UHJ9 254 aa11.57□□□□□ -0.56
RPS3-214ENST00000530164 ZNRF3Q9ULT6 936 aa11.57□□□□□ -0.56
RPS3-214ENST00000530164 RIC1Q4ADV7 1423 aa11.57□□□□□ -0.56
RPS3-214ENST00000530164 CD2BP2O95400 341 aaKnown RBP11.57□□□□□ -0.56
RPS3-214ENST00000530164 CXCL9Q07325 125 aa11.57□□□□□ -0.56
RPS3-214ENST00000530164 SUSD4Q5VX71 490 aa11.57□□□□□ -0.56
RPS3-214ENST00000530164 CASC1Q6TDU7 716 aa11.57□□□□□ -0.56
RPS3-214ENST00000530164 KIF6Q6ZMV9 814 aa11.57□□□□□ -0.56
RPS3-214ENST00000530164 ZC3H15Q8WU90 426 aaKnown RBP11.57□□□□□ -0.56
RPS3-214ENST00000530164 PPP1R9BQ96SB3 815 aa11.57□□□□□ -0.56
RPS3-214ENST00000530164 MIS18AQ9NYP9 233 aa11.57□□□□□ -0.56
RPS3-214ENST00000530164 UBN2Q6ZU65 1347 aa11.56□□□□□ -0.56
RPS3-214ENST00000530164 GPTP24298 496 aa11.56□□□□□ -0.56
RPS3-214ENST00000530164 CCDC173Q0VFZ6 552 aa11.56□□□□□ -0.56
RPS3-214ENST00000530164 AOC3Q16853 763 aa11.56□□□□□ -0.56
RPS3-214ENST00000530164 NLRP3Q96P20 1036 aa11.56□□□□□ -0.56
RPS3-214ENST00000530164 USP26Q9BXU7 913 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms