RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 GSPT1P15170 499 aaKnown RBP17.69■□□□□ 0.42
TTC39A-216ENST00000530004 PDE1AP54750 535 aa17.69■□□□□ 0.42
TTC39A-216ENST00000530004 RPS8P62241 208 aaKnown RBP17.69■□□□□ 0.42
TTC39A-216ENST00000530004 G3BP1Q13283 466 aaKnown RBP eCLIP17.69■□□□□ 0.42
TTC39A-216ENST00000530004 TAF7LQ5H9L4 462 aa17.69■□□□□ 0.42
TTC39A-216ENST00000530004 ANKRD18AQ8IVF6 992 aa17.69■□□□□ 0.42
TTC39A-216ENST00000530004 SIL1Q9H173 461 aa17.69■□□□□ 0.42
TTC39A-216ENST00000530004 COL11A2P13942 1736 aaPredicted RBP17.69■□□□□ 0.42
TTC39A-216ENST00000530004 NLGN2Q8NFZ4 835 aa17.68■□□□□ 0.42
TTC39A-216ENST00000530004 SYT17Q9BSW7 474 aa17.68■□□□□ 0.42
TTC39A-216ENST00000530004 OSBPL3Q9H4L5 887 aa17.68■□□□□ 0.42
TTC39A-216ENST00000530004 COL4A1P02462 1669 aa17.68■□□□□ 0.42
TTC39A-216ENST00000530004 MX1P20591 662 aa17.68■□□□□ 0.42
TTC39A-216ENST00000530004 IGHMBP2P38935 993 aaKnown RBP17.68■□□□□ 0.42
TTC39A-216ENST00000530004 CNKSR1Q969H4 720 aa17.68■□□□□ 0.42
TTC39A-216ENST00000530004 BBOX1O75936 387 aa17.67■□□□□ 0.42
TTC39A-216ENST00000530004 LDHAL6AQ6ZMR3 332 aa17.67■□□□□ 0.42
TTC39A-216ENST00000530004 MPHOSPH8Q99549 860 aa17.67■□□□□ 0.42
TTC39A-216ENST00000530004 KIAA1551Q9HCM1 1747 aa17.67■□□□□ 0.42
TTC39A-216ENST00000530004 LRP5O75197 1615 aa17.67■□□□□ 0.42
TTC39A-216ENST00000530004 PUS3Q9BZE2 481 aaKnown RBP17.66■□□□□ 0.42
TTC39A-216ENST00000530004 BSDC1Q9NW68 430 aaPredicted RBP17.66■□□□□ 0.42
TTC39A-216ENST00000530004 PIM2Q9P1W9 311 aa17.66■□□□□ 0.42
TTC39A-216ENST00000530004 EYA2O00167 538 aa17.66■□□□□ 0.42
TTC39A-216ENST00000530004 SASH1O94885 1247 aa17.66■□□□□ 0.42
TTC39A-216ENST00000530004 SEC24BO95487 1268 aa17.66■□□□□ 0.42
TTC39A-216ENST00000530004 TSHZ3Q63HK5 1081 aa17.66■□□□□ 0.42
TTC39A-216ENST00000530004 PRPF40BQ6NWY9 871 aaKnown RBP17.66■□□□□ 0.42
TTC39A-216ENST00000530004 CLASRPQ8N2M8 674 aaKnown RBP17.66■□□□□ 0.42
TTC39A-216ENST00000530004 TTLL6Q8N841 843 aa17.66■□□□□ 0.42
TTC39A-216ENST00000530004 FBXO3Q9UK99 471 aa17.66■□□□□ 0.42
TTC39A-216ENST00000530004 LRRC24Q50LG9 513 aa17.65■□□□□ 0.42
TTC39A-216ENST00000530004 CNNM1Q9NRU3 951 aa17.65■□□□□ 0.42
TTC39A-216ENST00000530004 STAP2Q9UGK3 403 aa17.65■□□□□ 0.42
TTC39A-216ENST00000530004 PPEF1O14829 653 aaPredicted RBP17.64■□□□□ 0.41
TTC39A-216ENST00000530004 CIAO1O76071 339 aa17.64■□□□□ 0.41
TTC39A-216ENST00000530004 ATG9AQ7Z3C6 839 aa17.64■□□□□ 0.41
TTC39A-216ENST00000530004 TMC4Q7Z404 712 aa17.64■□□□□ 0.41
TTC39A-216ENST00000530004 RIPOR2Q9Y4F9 1068 aa17.64■□□□□ 0.41
TTC39A-216ENST00000530004 DLEC1Q9Y238 1755 aa17.64■□□□□ 0.41
TTC39A-216ENST00000530004 TAF1P21675 1872 aa17.63■□□□□ 0.41
TTC39A-216ENST00000530004 WWC3Q9ULE0 1092 aa17.63■□□□□ 0.41
TTC39A-216ENST00000530004 ATP6V0A2Q9Y487 856 aa17.63■□□□□ 0.41
TTC39A-216ENST00000530004 AOX1Q06278 1338 aa17.63■□□□□ 0.41
TTC39A-216ENST00000530004 SRCAPQ6ZRS2 3230 aa17.62■□□□□ 0.41
TTC39A-216ENST00000530004 SDSP20132 328 aa17.62■□□□□ 0.41
TTC39A-216ENST00000530004 IL15P40933 162 aaPredicted RBP17.62■□□□□ 0.41
TTC39A-216ENST00000530004 DALRD3Q5D0E6 543 aaKnown RBP17.62■□□□□ 0.41
TTC39A-216ENST00000530004 SLC51AQ86UW1 340 aa17.62■□□□□ 0.41
TTC39A-216ENST00000530004 SP8Q8IXZ3 490 aa17.62■□□□□ 0.41
TTC39A-216ENST00000530004 MINPP1Q9UNW1 487 aa17.62■□□□□ 0.41
TTC39A-216ENST00000530004 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.62■□□□□ 0.41
TTC39A-216ENST00000530004 CDC45O75419 566 aa17.61■□□□□ 0.41
TTC39A-216ENST00000530004 IFIT2P09913 472 aaKnown RBP17.61■□□□□ 0.41
TTC39A-216ENST00000530004 AACSQ86V21 672 aa17.61■□□□□ 0.41
TTC39A-216ENST00000530004 C7orf43Q8WVR3 580 aa17.61■□□□□ 0.41
TTC39A-216ENST00000530004 ANP32AP39687 249 aaKnown RBP17.61■□□□□ 0.41
TTC39A-216ENST00000530004 CHRNDQ07001 517 aa17.61■□□□□ 0.41
TTC39A-216ENST00000530004 TBC1D9Q6ZT07 1266 aa17.61■□□□□ 0.41
TTC39A-216ENST00000530004 MROH5Q6ZUA9 1318 aa17.61■□□□□ 0.41
TTC39A-216ENST00000530004 OLFM4Q6UX06 510 aa17.6■□□□□ 0.41
TTC39A-216ENST00000530004 EAF2Q96CJ1 260 aaPredicted RBP17.6■□□□□ 0.41
TTC39A-216ENST00000530004 UPF2Q9HAU5 1272 aaKnown RBP17.6■□□□□ 0.41
TTC39A-216ENST00000530004 BCS1LQ9Y276 419 aa17.6■□□□□ 0.41
TTC39A-216ENST00000530004 SLX4Q8IY92 1834 aa17.59■□□□□ 0.41
TTC39A-216ENST00000530004 C21orf2O43822 256 aa17.59■□□□□ 0.41
TTC39A-216ENST00000530004 TFCP2Q12800 502 aa17.59■□□□□ 0.41
TTC39A-216ENST00000530004 METTL24Q5JXM2 366 aa17.59■□□□□ 0.41
TTC39A-216ENST00000530004 PI4K2BQ8TCG2 481 aa17.59■□□□□ 0.41
TTC39A-216ENST00000530004 TMX4Q9H1E5 349 aaPredicted RBP17.59■□□□□ 0.41
TTC39A-216ENST00000530004 ZNF219Q9P2Y4 722 aaPredicted RBP17.59■□□□□ 0.41
TTC39A-216ENST00000530004 MFAP1P55081 439 aaKnown RBP17.58■□□□□ 0.41
TTC39A-216ENST00000530004 TTC41PQ6P2S7 1318 aa17.58■□□□□ 0.41
TTC39A-216ENST00000530004 VGLL2Q8N8G2 317 aa17.58■□□□□ 0.41
TTC39A-216ENST00000530004 HELBQ8NG08 1087 aaPredicted RBP17.58■□□□□ 0.41
TTC39A-216ENST00000530004 GPATCH3Q96I76 525 aa17.58■□□□□ 0.41
TTC39A-216ENST00000530004 CEP126Q9P2H0 1117 aa17.58■□□□□ 0.41
TTC39A-216ENST00000530004 BRCA1P38398 1863 aaKnown RBP17.58■□□□□ 0.4
TTC39A-216ENST00000530004 TAF5LO75529 589 aa17.58■□□□□ 0.4
TTC39A-216ENST00000530004 CC2D2BQ6DHV5 1058 aa17.58■□□□□ 0.4
TTC39A-216ENST00000530004 ANKRD2Q9GZV1 360 aa17.58■□□□□ 0.4
TTC39A-216ENST00000530004 CCDC8Q9H0W5 538 aaPredicted RBP17.58■□□□□ 0.4
TTC39A-216ENST00000530004 NSFL1CQ9UNZ2 370 aaKnown RBP17.58■□□□□ 0.4
TTC39A-216ENST00000530004 TRIM6-TRIM34B2RNG4 842 aa17.57■□□□□ 0.4
TTC39A-216ENST00000530004 PDE8BO95263 885 aa17.57■□□□□ 0.4
TTC39A-216ENST00000530004 GPSM2P81274 684 aa17.57■□□□□ 0.4
TTC39A-216ENST00000530004 TNNI3KQ59H18 835 aa17.57■□□□□ 0.4
TTC39A-216ENST00000530004 ECHDC1Q9NTX5 307 aa17.57■□□□□ 0.4
TTC39A-216ENST00000530004 ANKIB1Q9P2G1 1089 aa17.57■□□□□ 0.4
TTC39A-216ENST00000530004 FPGT-TNNI3KV9GXZ4 949 aa17.57■□□□□ 0.4
TTC39A-216ENST00000530004 SPEF2Q9C093 1822 aa17.56■□□□□ 0.4
TTC39A-216ENST00000530004 XDHP47989 1333 aa17.56■□□□□ 0.4
TTC39A-216ENST00000530004 TLR7Q9NYK1 1049 aaKnown RBP17.56■□□□□ 0.4
TTC39A-216ENST00000530004 PODXL2Q9NZ53 605 aa17.56■□□□□ 0.4
TTC39A-216ENST00000530004 LRRC37AA6NMS7 1700 aa17.56■□□□□ 0.4
TTC39A-216ENST00000530004 ERC2O15083 957 aa17.56■□□□□ 0.4
TTC39A-216ENST00000530004 GLRX3O76003 335 aaKnown RBP17.56■□□□□ 0.4
TTC39A-216ENST00000530004 CCDC93Q567U6 631 aa17.56■□□□□ 0.4
TTC39A-216ENST00000530004 SOGA3Q5TF21 947 aa17.56■□□□□ 0.4
TTC39A-216ENST00000530004 MPNDQ8N594 471 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms