RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 TFIP11Q9UBB9 837 aaKnown RBP9.72□□□□□ -0.85
CTNND1-221ENST00000529873 TRAF1Q13077 416 aa9.71□□□□□ -0.85
CTNND1-221ENST00000529873 SNW1Q13573 536 aaKnown RBP9.71□□□□□ -0.85
CTNND1-221ENST00000529873 HOOK3Q86VS8 718 aa9.71□□□□□ -0.85
CTNND1-221ENST00000529873 RBM27Q9P2N5 1060 aaKnown RBP9.71□□□□□ -0.85
CTNND1-221ENST00000529873 SHANK2Q9UPX8 1470 aa9.71□□□□□ -0.85
CTNND1-221ENST00000529873 POLR3AO14802 1390 aaPredicted RBP9.71□□□□□ -0.85
CTNND1-221ENST00000529873 NPHP3Q7Z494 1330 aa9.71□□□□□ -0.85
CTNND1-221ENST00000529873 MAGEB6P1A0A0J9YX57 407 aa9.71□□□□□ -0.85
CTNND1-221ENST00000529873 GNAT2P19087 354 aa9.71□□□□□ -0.85
CTNND1-221ENST00000529873 IL15P40933 162 aaPredicted RBP9.71□□□□□ -0.85
CTNND1-221ENST00000529873 UBA7P41226 1012 aa9.71□□□□□ -0.85
CTNND1-221ENST00000529873 STAT6P42226 847 aa9.71□□□□□ -0.85
CTNND1-221ENST00000529873 TCERG1LQ5VWI1 586 aa9.71□□□□□ -0.85
CTNND1-221ENST00000529873 RRAGBQ5VZM2 374 aa9.71□□□□□ -0.85
CTNND1-221ENST00000529873 TMX3Q96JJ7 454 aa9.71□□□□□ -0.85
CTNND1-221ENST00000529873 WDR62O43379 1518 aa9.71□□□□□ -0.86
CTNND1-221ENST00000529873 ATP2B3Q16720 1220 aa9.71□□□□□ -0.86
CTNND1-221ENST00000529873 Q6ZUG5 572 aa9.71□□□□□ -0.86
CTNND1-221ENST00000529873 KCNG4Q8TDN1 519 aa9.71□□□□□ -0.86
CTNND1-221ENST00000529873 ALG1Q9BT22 464 aa9.71□□□□□ -0.86
CTNND1-221ENST00000529873 TRMT1Q9NXH9 659 aaKnown RBP9.71□□□□□ -0.86
CTNND1-221ENST00000529873 TTC41PQ6P2S7 1318 aa9.71□□□□□ -0.86
CTNND1-221ENST00000529873 GRM8O00222 908 aa9.71□□□□□ -0.86
CTNND1-221ENST00000529873 SYKP43405 635 aa9.71□□□□□ -0.86
CTNND1-221ENST00000529873 RBM25P49756 843 aaKnown RBP9.71□□□□□ -0.86
CTNND1-221ENST00000529873 TRIM47Q96LD4 638 aa9.71□□□□□ -0.86
CTNND1-221ENST00000529873 DNA2P51530 1060 aa9.71□□□□□ -0.86
CTNND1-221ENST00000529873 SMC1AQ14683 1233 aaKnown RBP9.71□□□□□ -0.86
CTNND1-221ENST00000529873 LRSAM1Q6UWE0 723 aa9.71□□□□□ -0.86
CTNND1-221ENST00000529873 GDPD2Q9HCC8 539 aa9.71□□□□□ -0.86
CTNND1-221ENST00000529873 EIF4G3O43432 1585 aaKnown RBP9.7□□□□□ -0.86
CTNND1-221ENST00000529873 NUP153P49790 1475 aaKnown RBP9.7□□□□□ -0.86
CTNND1-221ENST00000529873 CALM1P0DP23 149 aa9.7□□□□□ -0.86
CTNND1-221ENST00000529873 CALM2P0DP24 149 aa9.7□□□□□ -0.86
CTNND1-221ENST00000529873 CALM3P0DP25 149 aa9.7□□□□□ -0.86
CTNND1-221ENST00000529873 HEATR3Q7Z4Q2 680 aa9.7□□□□□ -0.86
CTNND1-221ENST00000529873 ANKRD44Q8N8A2 993 aa9.7□□□□□ -0.86
CTNND1-221ENST00000529873 FLT4P35916 1363 aa9.7□□□□□ -0.86
CTNND1-221ENST00000529873 EIF4A2Q14240 407 aaKnown RBP9.7□□□□□ -0.86
CTNND1-221ENST00000529873 CEP135Q66GS9 1140 aa9.7□□□□□ -0.86
CTNND1-221ENST00000529873 SUDS3Q9H7L9 328 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-221ENST00000529873 TTC12Q9H892 705 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-221ENST00000529873 PAG1Q9NWQ8 432 aa9.7□□□□□ -0.86
CTNND1-221ENST00000529873 RBM8AQ9Y5S9 174 aaKnown RBP9.7□□□□□ -0.86
CTNND1-221ENST00000529873 CCDC171Q6TFL3 1326 aa9.7□□□□□ -0.86
CTNND1-221ENST00000529873 IDEP14735 1019 aa9.7□□□□□ -0.86
CTNND1-221ENST00000529873 GNAQP50148 359 aa9.7□□□□□ -0.86
CTNND1-221ENST00000529873 PDE1AP54750 535 aa9.7□□□□□ -0.86
CTNND1-221ENST00000529873 CTR9Q6PD62 1173 aa9.7□□□□□ -0.86
CTNND1-221ENST00000529873 GIGYF2Q6Y7W6 1299 aaKnown RBP9.7□□□□□ -0.86
CTNND1-221ENST00000529873 CCDC97Q96F63 343 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-221ENST00000529873 MEIS3Q99687 375 aa9.7□□□□□ -0.86
CTNND1-221ENST00000529873 ARID4AP29374 1257 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-221ENST00000529873 NMIQ13287 307 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-221ENST00000529873 KLHL40Q2TBA0 621 aa9.7□□□□□ -0.86
CTNND1-221ENST00000529873 TIGD1Q96MW7 591 aa9.7□□□□□ -0.86
CTNND1-221ENST00000529873 HMGB1P1B2RPK0 211 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-221ENST00000529873 POLR3GO15318 223 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-221ENST00000529873 NBPF7P0C2Y1 421 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-221ENST00000529873 NPATQ14207 1427 aa9.69□□□□□ -0.86
CTNND1-221ENST00000529873 NAA16Q6N069 864 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-221ENST00000529873 PARD3Q8TEW0 1356 aa9.69□□□□□ -0.86
CTNND1-221ENST00000529873 CCDC174Q6PII3 467 aa9.69□□□□□ -0.86
CTNND1-221ENST00000529873 COPS6Q7L5N1 327 aa9.69□□□□□ -0.86
CTNND1-221ENST00000529873 BRF1Q92994 677 aa9.69□□□□□ -0.86
CTNND1-221ENST00000529873 ACSBG1Q96GR2 724 aa9.69□□□□□ -0.86
CTNND1-221ENST00000529873 DRC1Q96MC2 740 aa9.69□□□□□ -0.86
CTNND1-221ENST00000529873 FERMT1Q9BQL6 677 aa9.69□□□□□ -0.86
CTNND1-221ENST00000529873 GTPBP4Q9BZE4 634 aaKnown RBP9.69□□□□□ -0.86
CTNND1-221ENST00000529873 PRDM10Q9NQV6 1147 aa9.69□□□□□ -0.86
CTNND1-221ENST00000529873 RNF113AO15541 343 aaKnown RBP9.69□□□□□ -0.86
CTNND1-221ENST00000529873 SARNPP82979 210 aaKnown RBP9.69□□□□□ -0.86
CTNND1-221ENST00000529873 PAXBP1Q9Y5B6 917 aa9.69□□□□□ -0.86
CTNND1-221ENST00000529873 KRT2P35908 639 aa9.69□□□□□ -0.86
CTNND1-221ENST00000529873 CKAP4Q07065 602 aaKnown RBP9.69□□□□□ -0.86
CTNND1-221ENST00000529873 ISM2Q6H9L7 571 aa9.69□□□□□ -0.86
CTNND1-221ENST00000529873 DDX12PQ92771 950 aa9.69□□□□□ -0.86
CTNND1-221ENST00000529873 C16orf45Q96MC5 204 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-221ENST00000529873 CNPY2Q9Y2B0 182 aa9.69□□□□□ -0.86
CTNND1-221ENST00000529873 NECAB1Q8N987 351 aa9.69□□□□□ -0.86
CTNND1-221ENST00000529873 CCDC175P0C221 793 aa9.68□□□□□ -0.86
CTNND1-221ENST00000529873 USP37Q86T82 979 aa9.68□□□□□ -0.86
CTNND1-221ENST00000529873 PANK2Q9BZ23 570 aa9.68□□□□□ -0.86
CTNND1-221ENST00000529873 PUF60Q9UHX1 559 aaKnown RBP9.68□□□□□ -0.86
CTNND1-221ENST00000529873 ABCC10Q5T3U5 1492 aa9.68□□□□□ -0.86
CTNND1-221ENST00000529873 ANXA1P04083 346 aa9.68□□□□□ -0.86
CTNND1-221ENST00000529873 NOP2P46087 812 aaKnown RBP9.68□□□□□ -0.86
CTNND1-221ENST00000529873 PCDH11XQ9BZA7 1347 aa9.68□□□□□ -0.86
CTNND1-221ENST00000529873 PCDH11YQ9BZA8 1340 aa9.68□□□□□ -0.86
CTNND1-221ENST00000529873 ARHGEF12Q9NZN5 1544 aa9.68□□□□□ -0.86
CTNND1-221ENST00000529873 IL2RBP14784 551 aa9.68□□□□□ -0.86
CTNND1-221ENST00000529873 ZNF165P49910 485 aa9.68□□□□□ -0.86
CTNND1-221ENST00000529873 MTHFSDQ2M296 383 aaKnown RBP9.68□□□□□ -0.86
CTNND1-221ENST00000529873 CNPY4Q8N129 248 aa9.68□□□□□ -0.86
CTNND1-221ENST00000529873 RRP36Q96EU6 259 aaKnown RBP9.68□□□□□ -0.86
CTNND1-221ENST00000529873 PUS7Q96PZ0 661 aaKnown RBP9.68□□□□□ -0.86
CTNND1-221ENST00000529873 MMRN2Q9H8L6 949 aa9.68□□□□□ -0.86
CTNND1-221ENST00000529873 PIK3C2GO75747 1445 aa9.68□□□□□ -0.86
CTNND1-221ENST00000529873 SOS1Q07889 1333 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms