RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 GPSM2P81274 684 aa13.64□□□□□ -0.23
COPB1-207ENST00000529866 LMOD3Q0VAK6 560 aa13.64□□□□□ -0.23
COPB1-207ENST00000529866 NECTIN2Q92692 538 aa13.64□□□□□ -0.23
COPB1-207ENST00000529866 ZNF280AP59817 542 aaPredicted RBP13.63□□□□□ -0.23
COPB1-207ENST00000529866 ANGEL2Q5VTE6 544 aaKnown RBP13.63□□□□□ -0.23
COPB1-207ENST00000529866 AGBL3Q8NEM8 1001 aa13.63□□□□□ -0.23
COPB1-207ENST00000529866 TBC1D16Q8TBP0 767 aa13.63□□□□□ -0.23
COPB1-207ENST00000529866 ZNF296Q8WUU4 475 aaPredicted RBP13.63□□□□□ -0.23
COPB1-207ENST00000529866 PITPNM2Q9BZ72 1349 aa13.63□□□□□ -0.23
COPB1-207ENST00000529866 LRRC37AA6NMS7 1700 aa13.62□□□□□ -0.23
COPB1-207ENST00000529866 UFL1O94874 794 aa13.62□□□□□ -0.23
COPB1-207ENST00000529866 HSP90B1P14625 803 aaKnown RBP13.62□□□□□ -0.23
COPB1-207ENST00000529866 RPS8P62241 208 aaKnown RBP13.62□□□□□ -0.23
COPB1-207ENST00000529866 SCARF1Q14162 830 aa13.62□□□□□ -0.23
COPB1-207ENST00000529866 PLBD2Q8NHP8 589 aa13.62□□□□□ -0.23
COPB1-207ENST00000529866 FAM89AQ96GI7 184 aa13.62□□□□□ -0.23
COPB1-207ENST00000529866 KCNQ5Q9NR82 932 aa13.62□□□□□ -0.23
COPB1-207ENST00000529866 ANKIB1Q9P2G1 1089 aa13.62□□□□□ -0.23
COPB1-207ENST00000529866 ANKRD36CQ5JPF3 1778 aa13.62□□□□□ -0.23
COPB1-207ENST00000529866 ZNF609O15014 1411 aa13.62□□□□□ -0.23
COPB1-207ENST00000529866 ASTN2O75129 1339 aaPredicted RBP13.62□□□□□ -0.23
COPB1-207ENST00000529866 RIPK4P57078 832 aa13.61□□□□□ -0.23
COPB1-207ENST00000529866 NOM1Q5C9Z4 860 aaKnown RBP13.61□□□□□ -0.23
COPB1-207ENST00000529866 RSBN1LQ6PCB5 846 aaPredicted RBP13.61□□□□□ -0.23
COPB1-207ENST00000529866 FBXO46Q6PJ61 603 aaPredicted RBP13.61□□□□□ -0.23
COPB1-207ENST00000529866 PODXL2Q9NZ53 605 aa13.61□□□□□ -0.23
COPB1-207ENST00000529866 GGA1Q9UJY5 639 aa13.61□□□□□ -0.23
COPB1-207ENST00000529866 IRS4O14654 1257 aaPredicted RBP13.6□□□□□ -0.23
COPB1-207ENST00000529866 TBC1D8O95759 1140 aa13.6□□□□□ -0.23
COPB1-207ENST00000529866 USP17L8P0C7I0 530 aa13.6□□□□□ -0.23
COPB1-207ENST00000529866 NF2P35240 595 aa13.6□□□□□ -0.23
COPB1-207ENST00000529866 SREBF2Q12772 1141 aa13.6□□□□□ -0.23
COPB1-207ENST00000529866 TTLL12Q14166 644 aaPredicted RBP13.6□□□□□ -0.23
COPB1-207ENST00000529866 ANKRD13DQ6ZTN6 518 aa13.6□□□□□ -0.23
COPB1-207ENST00000529866 ZNF428Q96B54 188 aa13.6□□□□□ -0.23
COPB1-207ENST00000529866 ISCA1Q9BUE6 129 aa13.6□□□□□ -0.23
COPB1-207ENST00000529866 MYOZ2Q9NPC6 264 aa13.6□□□□□ -0.23
COPB1-207ENST00000529866 CHPF2Q9P2E5 772 aa13.6□□□□□ -0.23
COPB1-207ENST00000529866 PAPPA2Q9BXP8 1791 aa13.6□□□□□ -0.23
COPB1-207ENST00000529866 GPR25O00155 361 aa13.59□□□□□ -0.23
COPB1-207ENST00000529866 HDGFL1Q5TGJ6 251 aa13.59□□□□□ -0.23
COPB1-207ENST00000529866 LAMB2P55268 1798 aa13.58□□□□□ -0.23
COPB1-207ENST00000529866 ATP5J2-PTCD1G3V325 749 aa13.58□□□□□ -0.24
COPB1-207ENST00000529866 RTL5Q5HYW3 569 aaPredicted RBP13.58□□□□□ -0.24
COPB1-207ENST00000529866 DBF4Q9UBU7 674 aaPredicted RBP13.58□□□□□ -0.24
COPB1-207ENST00000529866 AKAP11Q9UKA4 1901 aa13.57□□□□□ -0.24
COPB1-207ENST00000529866 DDX60Q8IY21 1712 aaKnown RBP13.57□□□□□ -0.24
COPB1-207ENST00000529866 UBE2Q2LH0YL09 131 aa13.57□□□□□ -0.24
COPB1-207ENST00000529866 FKTNO75072 461 aa13.57□□□□□ -0.24
COPB1-207ENST00000529866 HOXB7P09629 217 aa13.57□□□□□ -0.24
COPB1-207ENST00000529866 TM4SF4P48230 202 aa13.57□□□□□ -0.24
COPB1-207ENST00000529866 TRIM28Q13263 835 aaKnown RBP13.57□□□□□ -0.24
COPB1-207ENST00000529866 CCDC152Q4G0S7 254 aa13.57□□□□□ -0.24
COPB1-207ENST00000529866 MOB2Q70IA6 237 aa13.57□□□□□ -0.24
COPB1-207ENST00000529866 USP17L3A6NCW0 530 aa13.56□□□□□ -0.24
COPB1-207ENST00000529866 USP17L4A6NCW7 530 aa13.56□□□□□ -0.24
COPB1-207ENST00000529866 ALDH1A1P00352 501 aa13.56□□□□□ -0.24
COPB1-207ENST00000529866 USP17L1Q7RTZ2 530 aa13.56□□□□□ -0.24
COPB1-207ENST00000529866 PODNQ7Z5L7 613 aa13.56□□□□□ -0.24
COPB1-207ENST00000529866 OGFOD1Q8N543 542 aa13.56□□□□□ -0.24
COPB1-207ENST00000529866 ZBTB38Q8NAP3 1195 aaPredicted RBP13.56□□□□□ -0.24
COPB1-207ENST00000529866 CFHR5Q9BXR6 569 aa13.56□□□□□ -0.24
COPB1-207ENST00000529866 HYPKQ9NX55 129 aa13.56□□□□□ -0.24
COPB1-207ENST00000529866 XDHP47989 1333 aa13.56□□□□□ -0.24
COPB1-207ENST00000529866 DLG5Q8TDM6 1919 aa13.56□□□□□ -0.24
COPB1-207ENST00000529866 TMPOP42166 694 aaKnown RBP13.55□□□□□ -0.24
COPB1-207ENST00000529866 MKRN3Q13064 507 aaKnown RBP13.55□□□□□ -0.24
COPB1-207ENST00000529866 ARMC9Q7Z3E5 817 aa13.55□□□□□ -0.24
COPB1-207ENST00000529866 GMLQ99445 158 aa13.55□□□□□ -0.24
COPB1-207ENST00000529866 CHL1O00533 1208 aa13.54□□□□□ -0.24
COPB1-207ENST00000529866 ATP2B4P23634 1241 aa13.54□□□□□ -0.24
COPB1-207ENST00000529866 GOLGA2Q08379 1002 aa13.54□□□□□ -0.24
COPB1-207ENST00000529866 KRT24Q2M2I5 525 aa13.54□□□□□ -0.24
COPB1-207ENST00000529866 HABP4Q5JVS0 413 aaKnown RBP13.54□□□□□ -0.24
COPB1-207ENST00000529866 INTS3Q68E01 1043 aaKnown RBP13.54□□□□□ -0.24
COPB1-207ENST00000529866 ANKRD18AQ8IVF6 992 aa13.54□□□□□ -0.24
COPB1-207ENST00000529866 SEC31BQ9NQW1 1179 aa13.54□□□□□ -0.24
COPB1-207ENST00000529866 LAS1LQ9Y4W2 734 aaKnown RBP13.54□□□□□ -0.24
COPB1-207ENST00000529866 MYO3BQ8WXR4 1341 aa13.54□□□□□ -0.24
COPB1-207ENST00000529866 MMP14P50281 582 aa13.53□□□□□ -0.24
COPB1-207ENST00000529866 PRAMEF18Q5VWM3 479 aa13.53□□□□□ -0.24
COPB1-207ENST00000529866 RIC3Q7Z5B4 369 aa13.53□□□□□ -0.24
COPB1-207ENST00000529866 SCAF8Q9UPN6 1271 aaKnown RBP13.53□□□□□ -0.24
COPB1-207ENST00000529866 NBPF9Q3BBW0 867 aa13.52□□□□□ -0.25
COPB1-207ENST00000529866 APOBEC3FQ8IUX4 373 aaKnown RBP13.52□□□□□ -0.25
COPB1-207ENST00000529866 TRIM17Q9Y577 477 aa13.52□□□□□ -0.25
COPB1-207ENST00000529866 TAF1P21675 1872 aa13.51□□□□□ -0.25
COPB1-207ENST00000529866 MED23Q9ULK4 1368 aa13.51□□□□□ -0.25
COPB1-207ENST00000529866 WNT10BO00744 389 aa13.51□□□□□ -0.25
COPB1-207ENST00000529866 PDE8AO60658 829 aa13.51□□□□□ -0.25
COPB1-207ENST00000529866 PCCAP05165 728 aaPredicted RBP13.51□□□□□ -0.25
COPB1-207ENST00000529866 NEUROD2Q15784 382 aa13.51□□□□□ -0.25
COPB1-207ENST00000529866 CCDC191Q8NCU4 936 aa13.51□□□□□ -0.25
COPB1-207ENST00000529866 FBXW7Q969H0 707 aa13.51□□□□□ -0.25
COPB1-207ENST00000529866 CDC5LQ99459 802 aaKnown RBP13.51□□□□□ -0.25
COPB1-207ENST00000529866 POLR2AP24928 1970 aaKnown RBP13.51□□□□□ -0.25
COPB1-207ENST00000529866 SCN9AQ15858 1988 aa13.51□□□□□ -0.25
COPB1-207ENST00000529866 COL4A1P02462 1669 aa13.5□□□□□ -0.25
COPB1-207ENST00000529866 MANSC4A6NHS7 340 aaPredicted RBP13.5□□□□□ -0.25
COPB1-207ENST00000529866 INHBEP58166 350 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms