RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 ASTN2O75129 1339 aaPredicted RBP15.35■□□□□ 0.05
AMBRA1-207ENST00000529553 ZNF609O15014 1411 aa15.34■□□□□ 0.05
AMBRA1-207ENST00000529553 UBE2Q2LH0YL09 131 aa15.34■□□□□ 0.05
AMBRA1-207ENST00000529553 ALDH1A1P00352 501 aa15.34■□□□□ 0.05
AMBRA1-207ENST00000529553 TBC1D16Q8TBP0 767 aa15.34■□□□□ 0.05
AMBRA1-207ENST00000529553 THUMPD2Q9BTF0 503 aaKnown RBP15.34■□□□□ 0.05
AMBRA1-207ENST00000529553 PODXL2Q9NZ53 605 aa15.34■□□□□ 0.05
AMBRA1-207ENST00000529553 CNGB1Q14028 1251 aaPredicted RBP15.33■□□□□ 0.04
AMBRA1-207ENST00000529553 RSBN1LQ6PCB5 846 aaPredicted RBP15.33■□□□□ 0.04
AMBRA1-207ENST00000529553 COPS6Q7L5N1 327 aa15.33■□□□□ 0.04
AMBRA1-207ENST00000529553 CELF1Q92879 486 aaKnown RBP15.33■□□□□ 0.04
AMBRA1-207ENST00000529553 POLR2AP24928 1970 aaKnown RBP15.33■□□□□ 0.04
AMBRA1-207ENST00000529553 ANKRD36CQ5JPF3 1778 aa15.32■□□□□ 0.04
AMBRA1-207ENST00000529553 G3V3G9 751 aa15.32■□□□□ 0.04
AMBRA1-207ENST00000529553 USP17L8P0C7I0 530 aa15.32■□□□□ 0.04
AMBRA1-207ENST00000529553 EIF2S2P20042 333 aaKnown RBP15.32■□□□□ 0.04
AMBRA1-207ENST00000529553 INHBEP58166 350 aa15.32■□□□□ 0.04
AMBRA1-207ENST00000529553 DCAF8Q5TAQ9 597 aa15.32■□□□□ 0.04
AMBRA1-207ENST00000529553 GMLQ99445 158 aa15.32■□□□□ 0.04
AMBRA1-207ENST00000529553 MYOZ2Q9NPC6 264 aa15.32■□□□□ 0.04
AMBRA1-207ENST00000529553 BABAM1Q9NWV8 329 aa15.32■□□□□ 0.04
AMBRA1-207ENST00000529553 PAPPA2Q9BXP8 1791 aa15.31■□□□□ 0.04
AMBRA1-207ENST00000529553 RPS8P62241 208 aaKnown RBP15.31■□□□□ 0.04
AMBRA1-207ENST00000529553 MOB2Q70IA6 237 aa15.31■□□□□ 0.04
AMBRA1-207ENST00000529553 POTEFA5A3E0 1075 aa15.3■□□□□ 0.04
AMBRA1-207ENST00000529553 PPP2R1AP30153 589 aa15.3■□□□□ 0.04
AMBRA1-207ENST00000529553 NF2P35240 595 aa15.3■□□□□ 0.04
AMBRA1-207ENST00000529553 MMP14P50281 582 aa15.3■□□□□ 0.04
AMBRA1-207ENST00000529553 PROSER3Q2NL68 480 aa15.3■□□□□ 0.04
AMBRA1-207ENST00000529553 NFE2L2Q16236 605 aa15.29■□□□□ 0.04
AMBRA1-207ENST00000529553 XAGE3Q8WTP9 111 aa15.29■□□□□ 0.04
AMBRA1-207ENST00000529553 R3HDMLQ9H3Y0 253 aa15.29■□□□□ 0.04
AMBRA1-207ENST00000529553 LRRC37AA6NMS7 1700 aa15.29■□□□□ 0.04
AMBRA1-207ENST00000529553 AIMP1Q12904 312 aaKnown RBP15.28■□□□□ 0.04
AMBRA1-207ENST00000529553 TTLL12Q14166 644 aaPredicted RBP15.28■□□□□ 0.04
AMBRA1-207ENST00000529553 OTOP1Q7RTM1 612 aa15.28■□□□□ 0.04
AMBRA1-207ENST00000529553 ARMC9Q7Z3E5 817 aa15.28■□□□□ 0.04
AMBRA1-207ENST00000529553 PODNQ7Z5L7 613 aa15.28■□□□□ 0.04
AMBRA1-207ENST00000529553 PLEKHF1Q96S99 279 aa15.28■□□□□ 0.04
AMBRA1-207ENST00000529553 PNNQ9H307 717 aaKnown RBP15.28■□□□□ 0.04
AMBRA1-207ENST00000529553 TSPYL4Q9UJ04 414 aa15.28■□□□□ 0.04
AMBRA1-207ENST00000529553 TRIM17Q9Y577 477 aa15.28■□□□□ 0.04
AMBRA1-207ENST00000529553 KDM3BQ7LBC6 1761 aa15.28■□□□□ 0.04
AMBRA1-207ENST00000529553 USP17L3A6NCW0 530 aa15.27■□□□□ 0.04
AMBRA1-207ENST00000529553 USP17L4A6NCW7 530 aa15.27■□□□□ 0.04
AMBRA1-207ENST00000529553 ANXA1P04083 346 aa15.27■□□□□ 0.04
AMBRA1-207ENST00000529553 LDLRAD1Q5T700 205 aa15.27■□□□□ 0.04
AMBRA1-207ENST00000529553 USP17L1Q7RTZ2 530 aa15.27■□□□□ 0.04
AMBRA1-207ENST00000529553 ARMC5Q96C12 935 aa15.27■□□□□ 0.04
AMBRA1-207ENST00000529553 FAM89AQ96GI7 184 aa15.27■□□□□ 0.04
AMBRA1-207ENST00000529553 ISCA1Q9BUE6 129 aa15.27■□□□□ 0.04
AMBRA1-207ENST00000529553 ANKIB1Q9P2G1 1089 aa15.27■□□□□ 0.04
AMBRA1-207ENST00000529553 GGA1Q9UJY5 639 aa15.27■□□□□ 0.04
AMBRA1-207ENST00000529553 MKI67P46013 3256 aaKnown RBP15.27■□□□□ 0.03
AMBRA1-207ENST00000529553 MANSC4A6NHS7 340 aaPredicted RBP15.26■□□□□ 0.03
AMBRA1-207ENST00000529553 HSP90B1P14625 803 aaKnown RBP15.26■□□□□ 0.03
AMBRA1-207ENST00000529553 PTPN12Q05209 780 aaKnown RBP15.26■□□□□ 0.03
AMBRA1-207ENST00000529553 TRIM28Q13263 835 aaKnown RBP15.26■□□□□ 0.03
AMBRA1-207ENST00000529553 SPRYD7Q5W111 196 aa15.26■□□□□ 0.03
AMBRA1-207ENST00000529553 ERO1AQ96HE7 468 aa15.26■□□□□ 0.03
AMBRA1-207ENST00000529553 PCGF6Q9BYE7 350 aa15.26■□□□□ 0.03
AMBRA1-207ENST00000529553 COLQQ9Y215 455 aaPredicted RBP15.26■□□□□ 0.03
AMBRA1-207ENST00000529553 PTPN22Q9Y2R2 807 aa15.26■□□□□ 0.03
AMBRA1-207ENST00000529553 UFL1O94874 794 aa15.25■□□□□ 0.03
AMBRA1-207ENST00000529553 NBPF9Q3BBW0 867 aa15.25■□□□□ 0.03
AMBRA1-207ENST00000529553 PRAMEF18Q5VWM3 479 aa15.25■□□□□ 0.03
AMBRA1-207ENST00000529553 IFNL1Q8IU54 200 aa15.25■□□□□ 0.03
AMBRA1-207ENST00000529553 OGFOD1Q8N543 542 aa15.25■□□□□ 0.03
AMBRA1-207ENST00000529553 PLBD2Q8NHP8 589 aa15.25■□□□□ 0.03
AMBRA1-207ENST00000529553 LAMB2P55268 1798 aa15.24■□□□□ 0.03
AMBRA1-207ENST00000529553 UNCXA6NJT0 531 aa15.24■□□□□ 0.03
AMBRA1-207ENST00000529553 EN2P19622 333 aaPredicted RBP15.24■□□□□ 0.03
AMBRA1-207ENST00000529553 MKRN3Q13064 507 aaKnown RBP15.24■□□□□ 0.03
AMBRA1-207ENST00000529553 ANKRD13DQ6ZTN6 518 aa15.24■□□□□ 0.03
AMBRA1-207ENST00000529553 WNT10BO00744 389 aa15.23■□□□□ 0.03
AMBRA1-207ENST00000529553 IRS4O14654 1257 aaPredicted RBP15.23■□□□□ 0.03
AMBRA1-207ENST00000529553 ZBTB48P10074 688 aaPredicted RBP15.23■□□□□ 0.03
AMBRA1-207ENST00000529553 SLC10A4Q96EP9 437 aa15.23■□□□□ 0.03
AMBRA1-207ENST00000529553 TMEM106CQ9BVX2 250 aa15.23■□□□□ 0.03
AMBRA1-207ENST00000529553 DDX60Q8IY21 1712 aaKnown RBP15.23■□□□□ 0.03
AMBRA1-207ENST00000529553 ATP2B4P23634 1241 aa15.22■□□□□ 0.03
AMBRA1-207ENST00000529553 OTUD7BQ6GQQ9 843 aa15.22■□□□□ 0.03
AMBRA1-207ENST00000529553 SCAF8Q9UPN6 1271 aaKnown RBP15.22■□□□□ 0.03
AMBRA1-207ENST00000529553 MYO3BQ8WXR4 1341 aa15.21■□□□□ 0.03
AMBRA1-207ENST00000529553 MAP3K11Q16584 847 aa15.21■□□□□ 0.03
AMBRA1-207ENST00000529553 APOBEC3FQ8IUX4 373 aaKnown RBP15.21■□□□□ 0.03
AMBRA1-207ENST00000529553 EFCC1Q9HA90 598 aa15.21■□□□□ 0.03
AMBRA1-207ENST00000529553 XDHP47989 1333 aa15.2■□□□□ 0.02
AMBRA1-207ENST00000529553 DACT2Q5SW24 774 aa15.2■□□□□ 0.02
AMBRA1-207ENST00000529553 NBPF11Q86T75 865 aa15.2■□□□□ 0.02
AMBRA1-207ENST00000529553 ZBTB38Q8NAP3 1195 aaPredicted RBP15.2■□□□□ 0.02
AMBRA1-207ENST00000529553 OTUD5Q96G74 571 aa15.2■□□□□ 0.02
AMBRA1-207ENST00000529553 TAF1P21675 1872 aa15.2■□□□□ 0.02
AMBRA1-207ENST00000529553 MAPK8IP3Q9UPT6 1336 aa15.19■□□□□ 0.02
AMBRA1-207ENST00000529553 HTTP42858 3142 aa15.19■□□□□ 0.02
AMBRA1-207ENST00000529553 SCN9AQ15858 1988 aa15.19■□□□□ 0.02
AMBRA1-207ENST00000529553 ATP5J2-PTCD1G3V325 749 aa15.19■□□□□ 0.02
AMBRA1-207ENST00000529553 DLL1O00548 723 aa15.19■□□□□ 0.02
AMBRA1-207ENST00000529553 ARHGEF6Q15052 776 aa15.19■□□□□ 0.02
AMBRA1-207ENST00000529553 CCDC152Q4G0S7 254 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms