RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 SNED1Q8TER0 1413 aa14.19□□□□□ -0.14
CHD7-209ENST00000529472 GRIN3BO60391 1043 aa14.19□□□□□ -0.14
CHD7-209ENST00000529472 GPSM2P81274 684 aa14.19□□□□□ -0.14
CHD7-209ENST00000529472 RASSF7Q02833 373 aa14.19□□□□□ -0.14
CHD7-209ENST00000529472 POLA2Q14181 598 aa14.19□□□□□ -0.14
CHD7-209ENST00000529472 LRRC24Q50LG9 513 aa14.19□□□□□ -0.14
CHD7-209ENST00000529472 CC2D2BQ6DHV5 1058 aa14.19□□□□□ -0.14
CHD7-209ENST00000529472 DPP8Q6V1X1 898 aaPredicted RBP14.19□□□□□ -0.14
CHD7-209ENST00000529472 SIRT2Q8IXJ6 389 aa14.19□□□□□ -0.14
CHD7-209ENST00000529472 RTKN2Q8IZC4 609 aa14.19□□□□□ -0.14
CHD7-209ENST00000529472 SSH3Q8TE77 659 aa14.19□□□□□ -0.14
CHD7-209ENST00000529472 ANKIB1Q9P2G1 1089 aa14.19□□□□□ -0.14
CHD7-209ENST00000529472 MINPP1Q9UNW1 487 aa14.19□□□□□ -0.14
CHD7-209ENST00000529472 NSFL1CQ9UNZ2 370 aaKnown RBP14.19□□□□□ -0.14
CHD7-209ENST00000529472 LTBP1Q14766 1721 aa14.18□□□□□ -0.14
CHD7-209ENST00000529472 NFKBIEO00221 500 aa14.18□□□□□ -0.14
CHD7-209ENST00000529472 CHRNDQ07001 517 aa14.18□□□□□ -0.14
CHD7-209ENST00000529472 METTL24Q5JXM2 366 aa14.18□□□□□ -0.14
CHD7-209ENST00000529472 RPAP2Q8IXW5 612 aaPredicted RBP14.18□□□□□ -0.14
CHD7-209ENST00000529472 MPNDQ8N594 471 aa14.18□□□□□ -0.14
CHD7-209ENST00000529472 HELBQ8NG08 1087 aaPredicted RBP14.18□□□□□ -0.14
CHD7-209ENST00000529472 TAOK3Q9H2K8 898 aa14.18□□□□□ -0.14
CHD7-209ENST00000529472 COPRSQ9NQ92 184 aa14.18□□□□□ -0.14
CHD7-209ENST00000529472 PCDHB15Q9Y5E8 787 aa14.18□□□□□ -0.14
CHD7-209ENST00000529472 DUOX1Q9NRD9 1551 aa14.17□□□□□ -0.14
CHD7-209ENST00000529472 XDHP47989 1333 aa14.17□□□□□ -0.14
CHD7-209ENST00000529472 EYA2O00167 538 aa14.17□□□□□ -0.14
CHD7-209ENST00000529472 HMMRO75330 724 aa14.17□□□□□ -0.14
CHD7-209ENST00000529472 TAF5LO75529 589 aa14.17□□□□□ -0.14
CHD7-209ENST00000529472 UFL1O94874 794 aa14.17□□□□□ -0.14
CHD7-209ENST00000529472 NEFLP07196 543 aa14.17□□□□□ -0.14
CHD7-209ENST00000529472 RIPOR2Q9Y4F9 1068 aa14.17□□□□□ -0.14
CHD7-209ENST00000529472 C6orf229H3BNL8 230 aa14.16□□□□□ -0.14
CHD7-209ENST00000529472 SURF6O75683 361 aaKnown RBP14.16□□□□□ -0.14
CHD7-209ENST00000529472 KCNJ4P48050 445 aa14.16□□□□□ -0.14
CHD7-209ENST00000529472 FKBP4Q02790 459 aaKnown RBP eCLIP14.16□□□□□ -0.14
CHD7-209ENST00000529472 OS9Q13438 667 aaPredicted RBP14.16□□□□□ -0.14
CHD7-209ENST00000529472 GRIPAP1Q4V328 841 aa14.16□□□□□ -0.14
CHD7-209ENST00000529472 ATG9AQ7Z3C6 839 aa14.16□□□□□ -0.14
CHD7-209ENST00000529472 GPR101Q96P66 508 aaPredicted RBP14.16□□□□□ -0.14
CHD7-209ENST00000529472 ANKRD2Q9GZV1 360 aa14.16□□□□□ -0.14
CHD7-209ENST00000529472 ZNF277Q9NRM2 450 aaPredicted RBP14.16□□□□□ -0.14
CHD7-209ENST00000529472 GGA1Q9UJY5 639 aa14.16□□□□□ -0.14
CHD7-209ENST00000529472 MROH5Q6ZUA9 1318 aa14.15□□□□□ -0.14
CHD7-209ENST00000529472 CCDC88AQ3V6T2 1871 aa14.15□□□□□ -0.14
CHD7-209ENST00000529472 WTIPA6NIX2 430 aaPredicted RBP14.15□□□□□ -0.14
CHD7-209ENST00000529472 CIAO1O76071 339 aa14.15□□□□□ -0.14
CHD7-209ENST00000529472 IL15P40933 162 aaPredicted RBP14.15□□□□□ -0.14
CHD7-209ENST00000529472 G3BP1Q13283 466 aaKnown RBP eCLIP14.15□□□□□ -0.14
CHD7-209ENST00000529472 AAMPQ13685 434 aa14.15□□□□□ -0.14
CHD7-209ENST00000529472 TBC1D16Q8TBP0 767 aa14.15□□□□□ -0.14
CHD7-209ENST00000529472 PSMD1Q99460 953 aa14.15□□□□□ -0.14
CHD7-209ENST00000529472 PODXL2Q9NZ53 605 aa14.15□□□□□ -0.14
CHD7-209ENST00000529472 POLLQ9UGP5 575 aa14.15□□□□□ -0.14
CHD7-209ENST00000529472 EXOC6BQ9Y2D4 811 aa14.15□□□□□ -0.14
CHD7-209ENST00000529472 LTBP3Q9NS15 1303 aa14.15□□□□□ -0.15
CHD7-209ENST00000529472 SNAP23O00161 211 aa14.14□□□□□ -0.15
CHD7-209ENST00000529472 SUPT20HQ8NEM7 779 aa14.14□□□□□ -0.15
CHD7-209ENST00000529472 RTFDC1Q9BY42 306 aaPredicted RBP14.14□□□□□ -0.15
CHD7-209ENST00000529472 FBXO3Q9UK99 471 aa14.14□□□□□ -0.15
CHD7-209ENST00000529472 SBF1O95248 1867 aa14.14□□□□□ -0.15
CHD7-209ENST00000529472 ZNF804BA4D1E1 1349 aa14.14□□□□□ -0.15
CHD7-209ENST00000529472 APBB1O00213 710 aa14.13□□□□□ -0.15
CHD7-209ENST00000529472 PPIP5K2O43314 1243 aa14.13□□□□□ -0.15
CHD7-209ENST00000529472 LMNB1P20700 586 aa14.13□□□□□ -0.15
CHD7-209ENST00000529472 ATP2B4P23634 1241 aa14.13□□□□□ -0.15
CHD7-209ENST00000529472 PRELPP51888 382 aa14.13□□□□□ -0.15
CHD7-209ENST00000529472 VGLL2Q8N8G2 317 aa14.13□□□□□ -0.15
CHD7-209ENST00000529472 LEMD3Q9Y2U8 911 aa14.13□□□□□ -0.15
CHD7-209ENST00000529472 NOP58Q9Y2X3 529 aaKnown RBP14.13□□□□□ -0.15
CHD7-209ENST00000529472 RIMBP2O15034 1052 aa14.12□□□□□ -0.15
CHD7-209ENST00000529472 PDE8BO95263 885 aa14.12□□□□□ -0.15
CHD7-209ENST00000529472 KLRK1P26718 216 aa14.12□□□□□ -0.15
CHD7-209ENST00000529472 IARSP41252 1262 aaKnown RBP14.12□□□□□ -0.15
CHD7-209ENST00000529472 TFCP2Q12800 502 aa14.12□□□□□ -0.15
CHD7-209ENST00000529472 AOC3Q16853 763 aa14.12□□□□□ -0.15
CHD7-209ENST00000529472 WASHC4Q2M389 1173 aa14.12□□□□□ -0.15
CHD7-209ENST00000529472 EYA3Q99504 573 aa14.12□□□□□ -0.15
CHD7-209ENST00000529472 RNF181Q9P0P0 153 aa14.12□□□□□ -0.15
CHD7-209ENST00000529472 CEP126Q9P2H0 1117 aa14.12□□□□□ -0.15
CHD7-209ENST00000529472 COL4A5P29400 1685 aa14.11□□□□□ -0.15
CHD7-209ENST00000529472 SASH1O94885 1247 aa14.11□□□□□ -0.15
CHD7-209ENST00000529472 PUM3Q15397 648 aaKnown RBP14.11□□□□□ -0.15
CHD7-209ENST00000529472 C9orf131Q5VYM1 1079 aa14.11□□□□□ -0.15
CHD7-209ENST00000529472 TIAM2Q8IVF5 1701 aa14.11□□□□□ -0.15
CHD7-209ENST00000529472 LARGE2Q8N3Y3 721 aa14.11□□□□□ -0.15
CHD7-209ENST00000529472 ZC3H12CQ9C0D7 883 aaKnown RBP14.11□□□□□ -0.15
CHD7-209ENST00000529472 BCL11AQ9H165 835 aa14.11□□□□□ -0.15
CHD7-209ENST00000529472 MED23Q9ULK4 1368 aa14.1□□□□□ -0.15
CHD7-209ENST00000529472 DICER1Q9UPY3 1922 aaKnown RBP14.1□□□□□ -0.15
CHD7-209ENST00000529472 UBE4AQ14139 1066 aa14.1□□□□□ -0.15
CHD7-209ENST00000529472 ATP2B3Q16720 1220 aa14.1□□□□□ -0.15
CHD7-209ENST00000529472 HSP90AB4PQ58FF6 505 aa14.1□□□□□ -0.15
CHD7-209ENST00000529472 ERC1Q8IUD2 1116 aa14.1□□□□□ -0.15
CHD7-209ENST00000529472 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.1□□□□□ -0.15
CHD7-209ENST00000529472 CHD4Q14839 1912 aa14.09□□□□□ -0.15
CHD7-209ENST00000529472 ZNF609O15014 1411 aa14.09□□□□□ -0.15
CHD7-209ENST00000529472 KIAA2012Q0VF49 1180 aa14.09□□□□□ -0.15
CHD7-209ENST00000529472 HDAC1Q13547 482 aaPredicted RBP14.09□□□□□ -0.15
CHD7-209ENST00000529472 DOK7Q18PE1 504 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms