RNA–Protein interactions for RNA: ENST00000529386.5

CMTM1-212, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 924 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-212ENST00000529386 PNMA6EA0A0J9YXQ4 647 aa17.47■□□□□ 0.39
CMTM1-212ENST00000529386 EYA2O00167 538 aa17.47■□□□□ 0.39
CMTM1-212ENST00000529386 IL15P40933 162 aaPredicted RBP17.47■□□□□ 0.39
CMTM1-212ENST00000529386 RFX5P48382 616 aaPredicted RBP17.47■□□□□ 0.39
CMTM1-212ENST00000529386 IRX6P78412 446 aaPredicted RBP17.47■□□□□ 0.39
CMTM1-212ENST00000529386 PTPN12Q05209 780 aaKnown RBP17.47■□□□□ 0.39
CMTM1-212ENST00000529386 POLA2Q14181 598 aa17.47■□□□□ 0.39
CMTM1-212ENST00000529386 ARHGAP27Q6ZUM4 889 aa17.47■□□□□ 0.39
CMTM1-212ENST00000529386 MINPP1Q9UNW1 487 aa17.47■□□□□ 0.39
CMTM1-212ENST00000529386 NSFL1CQ9UNZ2 370 aaKnown RBP17.47■□□□□ 0.39
CMTM1-212ENST00000529386 GOLGB1Q14789 3259 aaKnown RBP17.47■□□□□ 0.39
CMTM1-212ENST00000529386 XDHP47989 1333 aa17.47■□□□□ 0.39
CMTM1-212ENST00000529386 KCNJ4P48050 445 aa17.46■□□□□ 0.39
CMTM1-212ENST00000529386 OS9Q13438 667 aaPredicted RBP17.46■□□□□ 0.39
CMTM1-212ENST00000529386 TAOK3Q9H2K8 898 aa17.46■□□□□ 0.39
CMTM1-212ENST00000529386 SPEF2Q9C093 1822 aa17.46■□□□□ 0.39
CMTM1-212ENST00000529386 SURF6O75683 361 aaKnown RBP17.45■□□□□ 0.38
CMTM1-212ENST00000529386 YBX3P16989 372 aaKnown RBP eCLIP17.45■□□□□ 0.38
CMTM1-212ENST00000529386 ATP2B4P23634 1241 aa17.45■□□□□ 0.38
CMTM1-212ENST00000529386 METTL24Q5JXM2 366 aa17.45■□□□□ 0.38
CMTM1-212ENST00000529386 ERC1Q8IUD2 1116 aa17.45■□□□□ 0.38
CMTM1-212ENST00000529386 KLHDC4Q8TBB5 520 aa17.45■□□□□ 0.38
CMTM1-212ENST00000529386 PSMD1Q99460 953 aa17.45■□□□□ 0.38
CMTM1-212ENST00000529386 SIL1Q9H173 461 aa17.45■□□□□ 0.38
CMTM1-212ENST00000529386 PODXL2Q9NZ53 605 aa17.45■□□□□ 0.38
CMTM1-212ENST00000529386 GGA1Q9UJY5 639 aa17.45■□□□□ 0.38
CMTM1-212ENST00000529386 FKBP4Q02790 459 aaKnown RBP eCLIP17.44■□□□□ 0.38
CMTM1-212ENST00000529386 CHRNDQ07001 517 aa17.44■□□□□ 0.38
CMTM1-212ENST00000529386 EYA3Q99504 573 aa17.44■□□□□ 0.38
CMTM1-212ENST00000529386 VPS33BQ9H267 617 aa17.44■□□□□ 0.38
CMTM1-212ENST00000529386 CEP126Q9P2H0 1117 aa17.44■□□□□ 0.38
CMTM1-212ENST00000529386 LEMD3Q9Y2U8 911 aa17.44■□□□□ 0.38
CMTM1-212ENST00000529386 RIPOR2Q9Y4F9 1068 aa17.44■□□□□ 0.38
CMTM1-212ENST00000529386 LTBP3Q9NS15 1303 aa17.44■□□□□ 0.38
CMTM1-212ENST00000529386 LRRC37AA6NMS7 1700 aa17.44■□□□□ 0.38
CMTM1-212ENST00000529386 C6orf229H3BNL8 230 aa17.43■□□□□ 0.38
CMTM1-212ENST00000529386 GPSM2P81274 684 aa17.43■□□□□ 0.38
CMTM1-212ENST00000529386 RWDD1Q9H446 243 aaPredicted RBP17.43■□□□□ 0.38
CMTM1-212ENST00000529386 PA2G4Q9UQ80 394 aaKnown RBP17.43■□□□□ 0.38
CMTM1-212ENST00000529386 NOP58Q9Y2X3 529 aaKnown RBP17.43■□□□□ 0.38
CMTM1-212ENST00000529386 UFL1O94874 794 aa17.42■□□□□ 0.38
CMTM1-212ENST00000529386 LRRC24Q50LG9 513 aa17.42■□□□□ 0.38
CMTM1-212ENST00000529386 OLFM4Q6UX06 510 aa17.42■□□□□ 0.38
CMTM1-212ENST00000529386 RTFDC1Q9BY42 306 aaPredicted RBP17.42■□□□□ 0.38
CMTM1-212ENST00000529386 PUS3Q9BZE2 481 aaKnown RBP17.42■□□□□ 0.38
CMTM1-212ENST00000529386 AKAP2Q9Y2D5 859 aa17.42■□□□□ 0.38
CMTM1-212ENST00000529386 PCDHB15Q9Y5E8 787 aa17.42■□□□□ 0.38
CMTM1-212ENST00000529386 RAB11FIP3O75154 756 aa17.41■□□□□ 0.38
CMTM1-212ENST00000529386 ERICH6BQ5W0A0 696 aa17.41■□□□□ 0.38
CMTM1-212ENST00000529386 SIRT2Q8IXJ6 389 aa17.41■□□□□ 0.38
CMTM1-212ENST00000529386 FER1L6Q2WGJ9 1857 aa17.41■□□□□ 0.38
CMTM1-212ENST00000529386 PDE8BO95263 885 aa17.4■□□□□ 0.38
CMTM1-212ENST00000529386 LMNB1P20700 586 aa17.4■□□□□ 0.38
CMTM1-212ENST00000529386 HDAC1Q13547 482 aaPredicted RBP17.4■□□□□ 0.38
CMTM1-212ENST00000529386 UBE4AQ14139 1066 aa17.4■□□□□ 0.38
CMTM1-212ENST00000529386 PUM3Q15397 648 aaKnown RBP17.4■□□□□ 0.38
CMTM1-212ENST00000529386 ATG9AQ7Z3C6 839 aa17.4■□□□□ 0.38
CMTM1-212ENST00000529386 TBC1D16Q8TBP0 767 aa17.4■□□□□ 0.38
CMTM1-212ENST00000529386 ZC3H12CQ9C0D7 883 aaKnown RBP17.4■□□□□ 0.38
CMTM1-212ENST00000529386 ZBTB47Q9UFB7 747 aaPredicted RBP17.4■□□□□ 0.38
CMTM1-212ENST00000529386 ZNF804BA4D1E1 1349 aa17.4■□□□□ 0.38
CMTM1-212ENST00000529386 COL4A1P02462 1669 aa17.39■□□□□ 0.37
CMTM1-212ENST00000529386 G3V3G9 751 aa17.39■□□□□ 0.37
CMTM1-212ENST00000529386 NFKBIEO00221 500 aa17.39■□□□□ 0.37
CMTM1-212ENST00000529386 WASHC4Q2M389 1173 aa17.39■□□□□ 0.37
CMTM1-212ENST00000529386 DCAF8Q5TAQ9 597 aa17.39■□□□□ 0.37
CMTM1-212ENST00000529386 HELBQ8NG08 1087 aaPredicted RBP17.39■□□□□ 0.37
CMTM1-212ENST00000529386 TAF5LO75529 589 aa17.38■□□□□ 0.37
CMTM1-212ENST00000529386 IFIT1P09914 478 aaKnown RBP17.38■□□□□ 0.37
CMTM1-212ENST00000529386 SLC5A1P13866 664 aa17.38■□□□□ 0.37
CMTM1-212ENST00000529386 JDP2Q8WYK2 163 aa17.38■□□□□ 0.37
CMTM1-212ENST00000529386 KIF1BPQ96EK5 621 aa17.38■□□□□ 0.37
CMTM1-212ENST00000529386 POLLQ9UGP5 575 aa17.38■□□□□ 0.37
CMTM1-212ENST00000529386 EXOC6BQ9Y2D4 811 aa17.38■□□□□ 0.37
CMTM1-212ENST00000529386 PPIP5K2O43314 1243 aa17.37■□□□□ 0.37
CMTM1-212ENST00000529386 IARSP41252 1262 aaKnown RBP17.37■□□□□ 0.37
CMTM1-212ENST00000529386 LARGE2Q8N3Y3 721 aa17.37■□□□□ 0.37
CMTM1-212ENST00000529386 LPIN2Q92539 896 aa17.37■□□□□ 0.37
CMTM1-212ENST00000529386 GCC1Q96CN9 775 aa17.37■□□□□ 0.37
CMTM1-212ENST00000529386 DCTPP1Q9H773 170 aa17.37■□□□□ 0.37
CMTM1-212ENST00000529386 ZNF277Q9NRM2 450 aaPredicted RBP17.37■□□□□ 0.37
CMTM1-212ENST00000529386 SNED1Q8TER0 1413 aa17.37■□□□□ 0.37
CMTM1-212ENST00000529386 RASSF7Q02833 373 aa17.36■□□□□ 0.37
CMTM1-212ENST00000529386 KIAA2012Q0VF49 1180 aa17.36■□□□□ 0.37
CMTM1-212ENST00000529386 TFCP2Q12800 502 aa17.36■□□□□ 0.37
CMTM1-212ENST00000529386 ATP2B3Q16720 1220 aa17.36■□□□□ 0.37
CMTM1-212ENST00000529386 CAVIN4Q5BKX8 364 aa17.36■□□□□ 0.37
CMTM1-212ENST00000529386 VGLL2Q8N8G2 317 aa17.36■□□□□ 0.37
CMTM1-212ENST00000529386 GPR108Q9NPR9 543 aa17.36■□□□□ 0.37
CMTM1-212ENST00000529386 MED23Q9ULK4 1368 aa17.36■□□□□ 0.37
CMTM1-212ENST00000529386 C15orf52Q6ZUT6 534 aaKnown RBP17.35■□□□□ 0.37
CMTM1-212ENST00000529386 ZNF804AQ7Z570 1209 aa17.35■□□□□ 0.37
CMTM1-212ENST00000529386 VPS37DQ86XT2 251 aa17.35■□□□□ 0.37
CMTM1-212ENST00000529386 NIM1KQ8IY84 436 aa17.35■□□□□ 0.37
CMTM1-212ENST00000529386 CLASRPQ8N2M8 674 aaKnown RBP17.35■□□□□ 0.37
CMTM1-212ENST00000529386 LRRCC1Q9C099 1032 aa17.35■□□□□ 0.37
CMTM1-212ENST00000529386 LTBP1Q14766 1721 aa17.35■□□□□ 0.37
CMTM1-212ENST00000529386 A0A1B0GUL6 1792 aa17.34■□□□□ 0.37
CMTM1-212ENST00000529386 APBB1O00213 710 aa17.34■□□□□ 0.37
CMTM1-212ENST00000529386 RIMBP2O15034 1052 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms