RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 METTL24Q5JXM2 366 aa30.48■■■□□ 2.47
LDLRAD3-203ENST00000528989 EAF2Q96CJ1 260 aaPredicted RBP30.48■■■□□ 2.47
LDLRAD3-203ENST00000528989 H0YIN7 160 aa30.48■■■□□ 2.47
LDLRAD3-203ENST00000528989 NPR1P16066 1061 aa30.48■■■□□ 2.47
LDLRAD3-203ENST00000528989 ZNF622Q969S3 477 aaKnown RBP eCLIP30.48■■■□□ 2.47
LDLRAD3-203ENST00000528989 CEP126Q9P2H0 1117 aa30.48■■■□□ 2.47
LDLRAD3-203ENST00000528989 TAF5LO75529 589 aa30.47■■■□□ 2.47
LDLRAD3-203ENST00000528989 MASTLQ96GX5 879 aa30.47■■■□□ 2.47
LDLRAD3-203ENST00000528989 PPP1R1BQ9UD71 204 aaPredicted RBP30.47■■■□□ 2.47
LDLRAD3-203ENST00000528989 MINPP1Q9UNW1 487 aa30.47■■■□□ 2.47
LDLRAD3-203ENST00000528989 SNAP23O00161 211 aa30.46■■■□□ 2.47
LDLRAD3-203ENST00000528989 SOCS7O14512 581 aa30.46■■■□□ 2.47
LDLRAD3-203ENST00000528989 CLASRPQ8N2M8 674 aaKnown RBP30.46■■■□□ 2.47
LDLRAD3-203ENST00000528989 CRAMP1Q96RY5 1269 aa30.46■■■□□ 2.47
LDLRAD3-203ENST00000528989 CHRNDQ07001 517 aa30.46■■■□□ 2.47
LDLRAD3-203ENST00000528989 VGLL2Q8N8G2 317 aa30.46■■■□□ 2.47
LDLRAD3-203ENST00000528989 TIMM10P62072 90 aa30.45■■■□□ 2.47
LDLRAD3-203ENST00000528989 AACSQ86V21 672 aa30.45■■■□□ 2.47
LDLRAD3-203ENST00000528989 CCDC8Q9H0W5 538 aaPredicted RBP30.45■■■□□ 2.47
LDLRAD3-203ENST00000528989 LRP5O75197 1615 aa30.45■■■□□ 2.46
LDLRAD3-203ENST00000528989 A0A0G2JLW4 131 aa30.44■■■□□ 2.46
LDLRAD3-203ENST00000528989 WTIPA6NIX2 430 aaPredicted RBP30.44■■■□□ 2.46
LDLRAD3-203ENST00000528989 TNNI3KQ59H18 835 aa30.44■■■□□ 2.46
LDLRAD3-203ENST00000528989 SPON1Q9HCB6 807 aa30.44■■■□□ 2.46
LDLRAD3-203ENST00000528989 FPGT-TNNI3KV9GXZ4 949 aa30.44■■■□□ 2.46
LDLRAD3-203ENST00000528989 TLR7Q9NYK1 1049 aaKnown RBP30.44■■■□□ 2.46
LDLRAD3-203ENST00000528989 MROH5Q6ZUA9 1318 aa30.43■■■□□ 2.46
LDLRAD3-203ENST00000528989 SPEF2Q9C093 1822 aa30.43■■■□□ 2.46
LDLRAD3-203ENST00000528989 TSHZ3Q63HK5 1081 aa30.43■■■□□ 2.46
LDLRAD3-203ENST00000528989 KLHL34Q8N239 644 aa30.43■■■□□ 2.46
LDLRAD3-203ENST00000528989 COL11A2P13942 1736 aaPredicted RBP30.43■■■□□ 2.46
LDLRAD3-203ENST00000528989 PDE8BO95263 885 aa30.42■■■□□ 2.46
LDLRAD3-203ENST00000528989 PLEKHM2Q8IWE5 1019 aa30.42■■■□□ 2.46
LDLRAD3-203ENST00000528989 BBOX1O75936 387 aa30.42■■■□□ 2.46
LDLRAD3-203ENST00000528989 DPEP1P16444 411 aa30.42■■■□□ 2.46
LDLRAD3-203ENST00000528989 KCNA3P22001 575 aa30.41■■■□□ 2.46
LDLRAD3-203ENST00000528989 ALDH1B1P30837 517 aa30.4■■■□□ 2.46
LDLRAD3-203ENST00000528989 OLFM4Q6UX06 510 aa30.4■■■□□ 2.46
LDLRAD3-203ENST00000528989 NEUROD6Q96NK8 337 aa30.4■■■□□ 2.46
LDLRAD3-203ENST00000528989 IFIT2P09913 472 aaKnown RBP30.4■■■□□ 2.46
LDLRAD3-203ENST00000528989 STYK1Q6J9G0 422 aa30.4■■■□□ 2.46
LDLRAD3-203ENST00000528989 SALL3Q9BXA9 1300 aa30.39■■■□□ 2.46
LDLRAD3-203ENST00000528989 A0A1B0GUL7 405 aa30.39■■■□□ 2.46
LDLRAD3-203ENST00000528989 PPEF1O14829 653 aaPredicted RBP30.38■■■□□ 2.45
LDLRAD3-203ENST00000528989 DBNLQ9UJU6 430 aaKnown RBP30.38■■■□□ 2.45
LDLRAD3-203ENST00000528989 DBNDD2Q9BQY9 259 aa30.38■■■□□ 2.45
LDLRAD3-203ENST00000528989 GPR108Q9NPR9 543 aa30.38■■■□□ 2.45
LDLRAD3-203ENST00000528989 WWC3Q9ULE0 1092 aa30.38■■■□□ 2.45
LDLRAD3-203ENST00000528989 MX1P20591 662 aa30.36■■■□□ 2.45
LDLRAD3-203ENST00000528989 PDE1AP54750 535 aa30.36■■■□□ 2.45
LDLRAD3-203ENST00000528989 ATP2B3Q16720 1220 aa30.36■■■□□ 2.45
LDLRAD3-203ENST00000528989 PRPF40BQ6NWY9 871 aaKnown RBP30.36■■■□□ 2.45
LDLRAD3-203ENST00000528989 AKAP2Q9Y2D5 859 aa30.36■■■□□ 2.45
LDLRAD3-203ENST00000528989 ADORA1P30542 326 aa30.36■■■□□ 2.45
LDLRAD3-203ENST00000528989 TGFB2P61812 414 aa30.36■■■□□ 2.45
LDLRAD3-203ENST00000528989 FGFR2P21802 821 aa30.35■■■□□ 2.45
LDLRAD3-203ENST00000528989 PUM3Q15397 648 aaKnown RBP30.35■■■□□ 2.45
LDLRAD3-203ENST00000528989 ZNF219Q9P2Y4 722 aaPredicted RBP30.35■■■□□ 2.45
LDLRAD3-203ENST00000528989 ZNF609O15014 1411 aa30.34■■■□□ 2.45
LDLRAD3-203ENST00000528989 CNKSR1Q969H4 720 aa30.34■■■□□ 2.45
LDLRAD3-203ENST00000528989 ANKIB1Q9P2G1 1089 aa30.34■■■□□ 2.45
LDLRAD3-203ENST00000528989 ATP6V0A2Q9Y487 856 aa30.34■■■□□ 2.45
LDLRAD3-203ENST00000528989 CD2APQ9Y5K6 639 aa30.34■■■□□ 2.45
LDLRAD3-203ENST00000528989 GPSM2P81274 684 aa30.33■■■□□ 2.45
LDLRAD3-203ENST00000528989 XAGE2Q96GT9 111 aa30.33■■■□□ 2.45
LDLRAD3-203ENST00000528989 NSFL1CQ9UNZ2 370 aaKnown RBP30.33■■■□□ 2.45
LDLRAD3-203ENST00000528989 SP8Q8IXZ3 490 aa30.33■■■□□ 2.45
LDLRAD3-203ENST00000528989 KIF13BQ9NQT8 1826 aa30.32■■■□□ 2.44
LDLRAD3-203ENST00000528989 ANKRD2Q9GZV1 360 aa30.32■■■□□ 2.44
LDLRAD3-203ENST00000528989 UTRNP46939 3433 aa30.32■■■□□ 2.44
LDLRAD3-203ENST00000528989 LPIN2Q92539 896 aa30.31■■■□□ 2.44
LDLRAD3-203ENST00000528989 STAP2Q9UGK3 403 aa30.31■■■□□ 2.44
LDLRAD3-203ENST00000528989 NLGN2Q8NFZ4 835 aa30.31■■■□□ 2.44
LDLRAD3-203ENST00000528989 TTLL6Q8N841 843 aa30.3■■■□□ 2.44
LDLRAD3-203ENST00000528989 SLX4Q8IY92 1834 aa30.3■■■□□ 2.44
LDLRAD3-203ENST00000528989 KLRK1P26718 216 aa30.29■■■□□ 2.44
LDLRAD3-203ENST00000528989 TMC4Q7Z404 712 aa30.29■■■□□ 2.44
LDLRAD3-203ENST00000528989 OSBPL3Q9H4L5 887 aa30.29■■■□□ 2.44
LDLRAD3-203ENST00000528989 PI4K2BQ8TCG2 481 aa30.29■■■□□ 2.44
LDLRAD3-203ENST00000528989 C7orf43Q8WVR3 580 aa30.29■■■□□ 2.44
LDLRAD3-203ENST00000528989 ECHDC1Q9NTX5 307 aa30.29■■■□□ 2.44
LDLRAD3-203ENST00000528989 UBE4AQ14139 1066 aa30.28■■■□□ 2.44
LDLRAD3-203ENST00000528989 GPR101Q96P66 508 aaPredicted RBP30.28■■■□□ 2.44
LDLRAD3-203ENST00000528989 XDHP47989 1333 aa30.28■■■□□ 2.44
LDLRAD3-203ENST00000528989 SLC5A1P13866 664 aa30.27■■■□□ 2.44
LDLRAD3-203ENST00000528989 KCNJ4P48050 445 aa30.27■■■□□ 2.44
LDLRAD3-203ENST00000528989 ZNF804BA4D1E1 1349 aa30.27■■■□□ 2.44
LDLRAD3-203ENST00000528989 C21orf2O43822 256 aa30.27■■■□□ 2.44
LDLRAD3-203ENST00000528989 GSPT1P15170 499 aaKnown RBP30.27■■■□□ 2.44
LDLRAD3-203ENST00000528989 FHDC1Q9C0D6 1143 aaPredicted RBP30.27■■■□□ 2.44
LDLRAD3-203ENST00000528989 PIM2Q9P1W9 311 aa30.27■■■□□ 2.44
LDLRAD3-203ENST00000528989 POLLQ9UGP5 575 aa30.27■■■□□ 2.44
LDLRAD3-203ENST00000528989 GORABQ5T7V8 394 aa30.26■■■□□ 2.43
LDLRAD3-203ENST00000528989 TXNRD3Q86VQ6 643 aa30.26■■■□□ 2.43
LDLRAD3-203ENST00000528989 CACNA1SQ13698 1873 aa30.25■■■□□ 2.43
LDLRAD3-203ENST00000528989 IFIT1P09914 478 aaKnown RBP30.25■■■□□ 2.43
LDLRAD3-203ENST00000528989 KIAA1551Q9HCM1 1747 aa30.25■■■□□ 2.43
LDLRAD3-203ENST00000528989 PODXL2Q9NZ53 605 aa30.25■■■□□ 2.43
LDLRAD3-203ENST00000528989 TTC41PQ6P2S7 1318 aa30.24■■■□□ 2.43
LDLRAD3-203ENST00000528989 UFL1O94874 794 aa30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms