RNA–Protein interactions for RNA: ENST00000528699.1

SIPA1-204, Transcript of signal-induced proliferation-associated 1, human

TSL 2

Gene SIPA1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1-204	ENST00000528699	FKBP5	Q13451	457 aa	Predicted RBP	13.76	□□□□□ -0.21
SIPA1-204	ENST00000528699	GCKR	Q14397	625 aa		13.76	□□□□□ -0.21
SIPA1-204	ENST00000528699	DNAAF4	Q8WXU2	420 aa		13.76	□□□□□ -0.21
SIPA1-204	ENST00000528699	MYH16	Q9H6N6	1097 aa		13.76	□□□□□ -0.21
SIPA1-204	ENST00000528699	PGAP2	Q9UHJ9	254 aa		13.76	□□□□□ -0.21
SIPA1-204	ENST00000528699	XDH	P47989	1333 aa		13.75	□□□□□ -0.21
SIPA1-204	ENST00000528699	SHTN1	A0MZ66	631 aa		13.75	□□□□□ -0.21
SIPA1-204	ENST00000528699	RASSF10	A6NK89	507 aa		13.75	□□□□□ -0.21
SIPA1-204	ENST00000528699	PSMD14	O00487	310 aa		13.75	□□□□□ -0.21
SIPA1-204	ENST00000528699	UFL1	O94874	794 aa		13.75	□□□□□ -0.21
SIPA1-204	ENST00000528699	HSPA1A	P0DMV8	641 aa	Known RBP	13.75	□□□□□ -0.21
SIPA1-204	ENST00000528699	HSPA1B	P0DMV9	641 aa	Known RBP	13.75	□□□□□ -0.21
SIPA1-204	ENST00000528699	HIRA	P54198	1017 aa	Predicted RBP	13.75	□□□□□ -0.21
SIPA1-204	ENST00000528699	UBE3B	Q7Z3V4	1068 aa		13.75	□□□□□ -0.21
SIPA1-204	ENST00000528699	ANKRD18A	Q8IVF6	992 aa		13.75	□□□□□ -0.21
SIPA1-204	ENST00000528699	LINS1	Q8NG48	757 aa		13.75	□□□□□ -0.21
SIPA1-204	ENST00000528699	TRPM4	Q8TD43	1214 aa		13.75	□□□□□ -0.21
SIPA1-204	ENST00000528699	DPF2	Q92785	391 aa		13.75	□□□□□ -0.21
SIPA1-204	ENST00000528699	PLA2G12B	Q9BX93	195 aa		13.75	□□□□□ -0.21
SIPA1-204	ENST00000528699	BCL2L13	Q9BXK5	485 aa		13.75	□□□□□ -0.21
SIPA1-204	ENST00000528699	GREM2	Q9H772	168 aa		13.75	□□□□□ -0.21
SIPA1-204	ENST00000528699	ANKIB1	Q9P2G1	1089 aa		13.75	□□□□□ -0.21
SIPA1-204	ENST00000528699	GGA1	Q9UJY5	639 aa		13.75	□□□□□ -0.21
SIPA1-204	ENST00000528699	PSME4	Q14997	1843 aa		13.75	□□□□□ -0.21
SIPA1-204	ENST00000528699	SPEF2	Q9C093	1822 aa		13.75	□□□□□ -0.21
SIPA1-204	ENST00000528699	THSD7B	Q9C0I4	1608 aa		13.75	□□□□□ -0.21
SIPA1-204	ENST00000528699	ZNF609	O15014	1411 aa		13.74	□□□□□ -0.21
SIPA1-204	ENST00000528699	TRPM7	Q96QT4	1865 aa		13.74	□□□□□ -0.21
SIPA1-204	ENST00000528699	VEGFB	P49765	207 aa		13.74	□□□□□ -0.21
SIPA1-204	ENST00000528699	FMR1	Q06787	632 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
SIPA1-204	ENST00000528699	DOK7	Q18PE1	504 aa		13.74	□□□□□ -0.21
SIPA1-204	ENST00000528699	MICALL2	Q8IY33	904 aa		13.74	□□□□□ -0.21
SIPA1-204	ENST00000528699	ZC3H15	Q8WU90	426 aa	Known RBP	13.74	□□□□□ -0.21
SIPA1-204	ENST00000528699	CDC5L	Q99459	802 aa	Known RBP	13.74	□□□□□ -0.21
SIPA1-204	ENST00000528699	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.74	□□□□□ -0.21
SIPA1-204	ENST00000528699	KCNQ5	Q9NR82	932 aa		13.74	□□□□□ -0.21
SIPA1-204	ENST00000528699	CNOT7	Q9UIV1	285 aa	Known RBP	13.74	□□□□□ -0.21
SIPA1-204	ENST00000528699	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.74	□□□□□ -0.21
SIPA1-204	ENST00000528699	TRAF5	O00463	557 aa		13.73	□□□□□ -0.21
SIPA1-204	ENST00000528699	RPS12	P25398	132 aa	Known RBP	13.73	□□□□□ -0.21
SIPA1-204	ENST00000528699	BSDC1	Q9NW68	430 aa	Predicted RBP	13.73	□□□□□ -0.21
SIPA1-204	ENST00000528699	MED23	Q9ULK4	1368 aa		13.72	□□□□□ -0.21
SIPA1-204	ENST00000528699	CSF1R	P07333	972 aa		13.72	□□□□□ -0.21
SIPA1-204	ENST00000528699	BEND3	Q5T5X7	828 aa		13.72	□□□□□ -0.21
SIPA1-204	ENST00000528699	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.72	□□□□□ -0.21
SIPA1-204	ENST00000528699	CST9	Q5W186	159 aa		13.72	□□□□□ -0.21
SIPA1-204	ENST00000528699	MINPP1	Q9UNW1	487 aa		13.72	□□□□□ -0.21
SIPA1-204	ENST00000528699	ZNF646	O15015	1829 aa	Predicted RBP	13.71	□□□□□ -0.21
SIPA1-204	ENST00000528699		H7C1D1	291 aa		13.71	□□□□□ -0.21
SIPA1-204	ENST00000528699	EGFR	P00533	1210 aa		13.71	□□□□□ -0.21
SIPA1-204	ENST00000528699	VIL1	P09327	827 aa	Known RBP	13.71	□□□□□ -0.21
SIPA1-204	ENST00000528699	ATP2B4	P23634	1241 aa		13.71	□□□□□ -0.21
SIPA1-204	ENST00000528699	DEFB115	Q30KQ5	88 aa		13.71	□□□□□ -0.21
SIPA1-204	ENST00000528699	FAM161A	Q3B820	660 aa		13.71	□□□□□ -0.21
SIPA1-204	ENST00000528699	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.71	□□□□□ -0.21
SIPA1-204	ENST00000528699	ABT1	Q9ULW3	272 aa	Known RBP	13.71	□□□□□ -0.21
SIPA1-204	ENST00000528699	WTIP	A6NIX2	430 aa	Predicted RBP	13.7	□□□□□ -0.22
SIPA1-204	ENST00000528699		F6X3S4	739 aa		13.7	□□□□□ -0.22
SIPA1-204	ENST00000528699	ITGA6	P23229	1130 aa		13.7	□□□□□ -0.22
SIPA1-204	ENST00000528699	SLFN5	Q08AF3	891 aa		13.7	□□□□□ -0.22
SIPA1-204	ENST00000528699	SAMD7	Q7Z3H4	446 aa		13.7	□□□□□ -0.22
SIPA1-204	ENST00000528699	TRMT2A	Q8IZ69	625 aa	Known RBP	13.7	□□□□□ -0.22
SIPA1-204	ENST00000528699	TLL2	Q9Y6L7	1015 aa		13.7	□□□□□ -0.22
SIPA1-204	ENST00000528699	WDR33	Q9C0J8	1336 aa	Known RBP	13.69	□□□□□ -0.22
SIPA1-204	ENST00000528699		A0A1B0GUL6	1792 aa		13.69	□□□□□ -0.22
SIPA1-204	ENST00000528699		E9PSI1	815 aa		13.69	□□□□□ -0.22
SIPA1-204	ENST00000528699	IGHMBP2	P38935	993 aa	Known RBP	13.69	□□□□□ -0.22
SIPA1-204	ENST00000528699	CCT4	P50991	539 aa	Known RBP	13.69	□□□□□ -0.22
SIPA1-204	ENST00000528699	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.69	□□□□□ -0.22
SIPA1-204	ENST00000528699	DIEXF	Q68CQ4	756 aa	Known RBP	13.69	□□□□□ -0.22
SIPA1-204	ENST00000528699	CDC37L1	Q7L3B6	337 aa		13.69	□□□□□ -0.22
SIPA1-204	ENST00000528699	PODN	Q7Z5L7	613 aa		13.69	□□□□□ -0.22
SIPA1-204	ENST00000528699	MIER1	Q8N108	512 aa		13.69	□□□□□ -0.22
SIPA1-204	ENST00000528699	CELF2	O95319	508 aa	Known RBP	13.68	□□□□□ -0.22
SIPA1-204	ENST00000528699	FOXO4	P98177	505 aa		13.68	□□□□□ -0.22
SIPA1-204	ENST00000528699	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.68	□□□□□ -0.22
SIPA1-204	ENST00000528699	AGBL3	Q8NEM8	1001 aa		13.68	□□□□□ -0.22
SIPA1-204	ENST00000528699	GML	Q99445	158 aa		13.68	□□□□□ -0.22
SIPA1-204	ENST00000528699		G3V3G9	751 aa		13.67	□□□□□ -0.22
SIPA1-204	ENST00000528699	FOXN1	O15353	648 aa		13.67	□□□□□ -0.22
SIPA1-204	ENST00000528699	ZNF280A	P59817	542 aa	Predicted RBP	13.67	□□□□□ -0.22
SIPA1-204	ENST00000528699	DCAF8	Q5TAQ9	597 aa		13.67	□□□□□ -0.22
SIPA1-204	ENST00000528699	SAPCD2	Q86UD0	394 aa		13.67	□□□□□ -0.22
SIPA1-204	ENST00000528699	CDCA7L	Q96GN5	454 aa		13.67	□□□□□ -0.22
SIPA1-204	ENST00000528699	WBP1L	Q9NX94	342 aa		13.67	□□□□□ -0.22
SIPA1-204	ENST00000528699	LEMD3	Q9Y2U8	911 aa		13.67	□□□□□ -0.22
SIPA1-204	ENST00000528699	GRM8	O00222	908 aa		13.66	□□□□□ -0.22
SIPA1-204	ENST00000528699	ALDH1L1	O75891	902 aa		13.66	□□□□□ -0.22
SIPA1-204	ENST00000528699	KIF4B	Q2VIQ3	1234 aa		13.66	□□□□□ -0.22
SIPA1-204	ENST00000528699	EPHA10	Q5JZY3	1008 aa		13.66	□□□□□ -0.22
SIPA1-204	ENST00000528699	CYP4F22	Q6NT55	531 aa		13.66	□□□□□ -0.22
SIPA1-204	ENST00000528699	TXNRD3	Q86VQ6	643 aa		13.66	□□□□□ -0.22
SIPA1-204	ENST00000528699	CAPNS2	Q96L46	248 aa		13.66	□□□□□ -0.22
SIPA1-204	ENST00000528699	MPHOSPH8	Q99549	860 aa		13.66	□□□□□ -0.22
SIPA1-204	ENST00000528699	ANKRD2	Q9GZV1	360 aa		13.66	□□□□□ -0.22
SIPA1-204	ENST00000528699	ZNF804B	A4D1E1	1349 aa		13.65	□□□□□ -0.22
SIPA1-204	ENST00000528699	IRS2	Q9Y4H2	1338 aa		13.65	□□□□□ -0.22
SIPA1-204	ENST00000528699	ANKRD18B	A2A2Z9	1011 aa		13.65	□□□□□ -0.22
SIPA1-204	ENST00000528699	USP17L3	A6NCW0	530 aa		13.65	□□□□□ -0.22
SIPA1-204	ENST00000528699	USP17L4	A6NCW7	530 aa		13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms