RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 GRAPQ13588 217 aa7.72□□□□□ -1.17
MACF1-228ENST00000528611 GRAPLQ8TC17 118 aaPredicted RBP7.72□□□□□ -1.17
MACF1-228ENST00000528611 RPGRQ92834 1020 aaKnown RBP7.72□□□□□ -1.17
MACF1-228ENST00000528611 TMX4Q9H1E5 349 aaPredicted RBP7.72□□□□□ -1.17
MACF1-228ENST00000528611 DCTPP1Q9H773 170 aa7.72□□□□□ -1.17
MACF1-228ENST00000528611 GPR108Q9NPR9 543 aa7.72□□□□□ -1.17
MACF1-228ENST00000528611 PPP4R2Q9NY27 417 aa7.72□□□□□ -1.17
MACF1-228ENST00000528611 DDX60Q8IY21 1712 aaKnown RBP7.72□□□□□ -1.17
MACF1-228ENST00000528611 LRP5O75197 1615 aa7.71□□□□□ -1.17
MACF1-228ENST00000528611 ZBTB7AO95365 584 aa7.71□□□□□ -1.18
MACF1-228ENST00000528611 ITGA6P23229 1130 aa7.71□□□□□ -1.18
MACF1-228ENST00000528611 IL15P40933 162 aaPredicted RBP7.71□□□□□ -1.18
MACF1-228ENST00000528611 SMIM5Q71RC9 77 aa7.71□□□□□ -1.18
MACF1-228ENST00000528611 NUTM1Q86Y26 1132 aa7.71□□□□□ -1.18
MACF1-228ENST00000528611 ANKRD18AQ8IVF6 992 aa7.71□□□□□ -1.18
MACF1-228ENST00000528611 SP8Q8IXZ3 490 aa7.71□□□□□ -1.18
MACF1-228ENST00000528611 EXOC6Q8TAG9 804 aa7.71□□□□□ -1.18
MACF1-228ENST00000528611 PDGFDQ9GZP0 370 aaPredicted RBP7.71□□□□□ -1.18
MACF1-228ENST00000528611 ANKRD2Q9GZV1 360 aa7.71□□□□□ -1.18
MACF1-228ENST00000528611 MROH5Q6ZUA9 1318 aa7.71□□□□□ -1.18
MACF1-228ENST00000528611 ABCC12Q96J65 1359 aa7.71□□□□□ -1.18
MACF1-228ENST00000528611 PSDA5PKW4 1024 aaPredicted RBP7.7□□□□□ -1.18
MACF1-228ENST00000528611 EYA2O00167 538 aa7.7□□□□□ -1.18
MACF1-228ENST00000528611 HCLS1P14317 486 aaPredicted RBP7.7□□□□□ -1.18
MACF1-228ENST00000528611 RFX5P48382 616 aaPredicted RBP7.7□□□□□ -1.18
MACF1-228ENST00000528611 PTPN12Q05209 780 aaKnown RBP7.7□□□□□ -1.18
MACF1-228ENST00000528611 EPHA10Q5JZY3 1008 aa7.7□□□□□ -1.18
MACF1-228ENST00000528611 MSL1Q68DK7 614 aa7.7□□□□□ -1.18
MACF1-228ENST00000528611 LDHAL6AQ6ZMR3 332 aa7.7□□□□□ -1.18
MACF1-228ENST00000528611 TICAM2Q86XR7 235 aa7.7□□□□□ -1.18
MACF1-228ENST00000528611 SMC5Q8IY18 1101 aa7.7□□□□□ -1.18
MACF1-228ENST00000528611 TTLL6Q8N841 843 aa7.7□□□□□ -1.18
MACF1-228ENST00000528611 KIF1BPQ96EK5 621 aa7.7□□□□□ -1.18
MACF1-228ENST00000528611 MPHOSPH8Q99549 860 aa7.7□□□□□ -1.18
MACF1-228ENST00000528611 PODXL2Q9NZ53 605 aa7.7□□□□□ -1.18
MACF1-228ENST00000528611 PIM2Q9P1W9 311 aa7.7□□□□□ -1.18
MACF1-228ENST00000528611 AKAP2Q9Y2D5 859 aa7.7□□□□□ -1.18
MACF1-228ENST00000528611 DLEC1Q9Y238 1755 aa7.69□□□□□ -1.18
MACF1-228ENST00000528611 G3BP1Q13283 466 aaKnown RBP eCLIP7.69□□□□□ -1.18
MACF1-228ENST00000528611 UBE4AQ14139 1066 aa7.69□□□□□ -1.18
MACF1-228ENST00000528611 TAF7LQ5H9L4 462 aa7.69□□□□□ -1.18
MACF1-228ENST00000528611 C15orf52Q6ZUT6 534 aaKnown RBP7.69□□□□□ -1.18
MACF1-228ENST00000528611 CENPQQ7L2Z9 268 aaPredicted RBP7.69□□□□□ -1.18
MACF1-228ENST00000528611 C2CD5Q86YS7 1000 aa7.69□□□□□ -1.18
MACF1-228ENST00000528611 SIRT2Q8IXJ6 389 aa7.69□□□□□ -1.18
MACF1-228ENST00000528611 RTKN2Q8IZC4 609 aa7.69□□□□□ -1.18
MACF1-228ENST00000528611 FAM163AQ96GL9 167 aaPredicted RBP7.69□□□□□ -1.18
MACF1-228ENST00000528611 GREM2Q9H772 168 aa7.69□□□□□ -1.18
MACF1-228ENST00000528611 SCUBE2Q9NQ36 999 aa7.69□□□□□ -1.18
MACF1-228ENST00000528611 LEMD3Q9Y2U8 911 aa7.69□□□□□ -1.18
MACF1-228ENST00000528611 ATP6V0A2Q9Y487 856 aa7.69□□□□□ -1.18
MACF1-228ENST00000528611 RIPOR2Q9Y4F9 1068 aa7.69□□□□□ -1.18
MACF1-228ENST00000528611 PCDHB15Q9Y5E8 787 aa7.69□□□□□ -1.18
MACF1-228ENST00000528611 ANKRD31Q8N7Z5 1873 aa7.68□□□□□ -1.18
MACF1-228ENST00000528611 PNMA6EA0A0J9YXQ4 647 aa7.68□□□□□ -1.18
MACF1-228ENST00000528611 FAM177BA6PVY3 158 aa7.68□□□□□ -1.18
MACF1-228ENST00000528611 SURF6O75683 361 aaKnown RBP7.68□□□□□ -1.18
MACF1-228ENST00000528611 PDE8BO95263 885 aa7.68□□□□□ -1.18
MACF1-228ENST00000528611 KCNA3P22001 575 aa7.68□□□□□ -1.18
MACF1-228ENST00000528611 FAM161AQ3B820 660 aa7.68□□□□□ -1.18
MACF1-228ENST00000528611 RTL5Q5HYW3 569 aaPredicted RBP7.68□□□□□ -1.18
MACF1-228ENST00000528611 TMED8Q6PL24 325 aaPredicted RBP7.68□□□□□ -1.18
MACF1-228ENST00000528611 SYNE4Q8N205 404 aa7.68□□□□□ -1.18
MACF1-228ENST00000528611 SUPT20HQ8NEM7 779 aa7.68□□□□□ -1.18
MACF1-228ENST00000528611 CCDC136Q96JN2 1154 aa7.68□□□□□ -1.18
MACF1-228ENST00000528611 CEP126Q9P2H0 1117 aa7.68□□□□□ -1.18
MACF1-228ENST00000528611 PPP1R1BQ9UD71 204 aaPredicted RBP7.68□□□□□ -1.18
MACF1-228ENST00000528611 ZBTB47Q9UFB7 747 aaPredicted RBP7.68□□□□□ -1.18
MACF1-228ENST00000528611 ATP2B4P23634 1241 aa7.67□□□□□ -1.18
MACF1-228ENST00000528611 MMP14P50281 582 aa7.67□□□□□ -1.18
MACF1-228ENST00000528611 ATN1P54259 1190 aaPredicted RBP7.67□□□□□ -1.18
MACF1-228ENST00000528611 DALRD3Q5D0E6 543 aaKnown RBP7.67□□□□□ -1.18
MACF1-228ENST00000528611 CLASRPQ8N2M8 674 aaKnown RBP7.67□□□□□ -1.18
MACF1-228ENST00000528611 C7orf43Q8WVR3 580 aa7.67□□□□□ -1.18
MACF1-228ENST00000528611 ZNF512BQ96KM6 892 aaPredicted RBP7.67□□□□□ -1.18
MACF1-228ENST00000528611 PSMD1Q99460 953 aa7.67□□□□□ -1.18
MACF1-228ENST00000528611 SYT17Q9BSW7 474 aa7.67□□□□□ -1.18
MACF1-228ENST00000528611 RTFDC1Q9BY42 306 aaPredicted RBP7.67□□□□□ -1.18
MACF1-228ENST00000528611 LRRCC1Q9C099 1032 aa7.67□□□□□ -1.18
MACF1-228ENST00000528611 CNNM1Q9NRU3 951 aa7.67□□□□□ -1.18
MACF1-228ENST00000528611 MINPP1Q9UNW1 487 aa7.67□□□□□ -1.18
MACF1-228ENST00000528611 CHMP3Q9Y3E7 222 aa7.67□□□□□ -1.18
MACF1-228ENST00000528611 XDHP47989 1333 aa7.67□□□□□ -1.18
MACF1-228ENST00000528611 LTBP3Q9NS15 1303 aa7.67□□□□□ -1.18
MACF1-228ENST00000528611 PPEF1O14829 653 aaPredicted RBP7.66□□□□□ -1.18
MACF1-228ENST00000528611 DPEP1P16444 411 aa7.66□□□□□ -1.18
MACF1-228ENST00000528611 PUM3Q15397 648 aaKnown RBP7.66□□□□□ -1.18
MACF1-228ENST00000528611 CCDC93Q567U6 631 aa7.66□□□□□ -1.18
MACF1-228ENST00000528611 PRPF40BQ6NWY9 871 aaKnown RBP7.66□□□□□ -1.18
MACF1-228ENST00000528611 ATG9AQ7Z3C6 839 aa7.66□□□□□ -1.18
MACF1-228ENST00000528611 RHPN1Q8TCX5 695 aa7.66□□□□□ -1.18
MACF1-228ENST00000528611 LPIN2Q92539 896 aa7.66□□□□□ -1.18
MACF1-228ENST00000528611 CELF1Q92879 486 aaKnown RBP7.66□□□□□ -1.18
MACF1-228ENST00000528611 EYA3Q99504 573 aa7.66□□□□□ -1.18
MACF1-228ENST00000528611 KDM2BQ8NHM5 1336 aa7.66□□□□□ -1.18
MACF1-228ENST00000528611 TNRC6CQ9HCJ0 1690 aaKnown RBP7.66□□□□□ -1.18
MACF1-228ENST00000528611 LRRC37AA6NMS7 1700 aa7.66□□□□□ -1.18
MACF1-228ENST00000528611 BRCA1P38398 1863 aaKnown RBP7.66□□□□□ -1.18
MACF1-228ENST00000528611 POTEFA5A3E0 1075 aa7.65□□□□□ -1.18
MACF1-228ENST00000528611 SEMA3EO15041 775 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 205 ms