RNA–Protein interactions for RNA: ENST00000528608.5

COMMD9-205, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 988 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-205ENST00000528608 KHNYNO15037 678 aaKnown RBP12.17□□□□□ -0.46
COMMD9-205ENST00000528608 ZBTB7BO15156 539 aaPredicted RBP12.17□□□□□ -0.46
COMMD9-205ENST00000528608 TXLNAP40222 546 aa12.17□□□□□ -0.46
COMMD9-205ENST00000528608 TEAD4Q15561 434 aa12.17□□□□□ -0.46
COMMD9-205ENST00000528608 NPHP4O75161 1426 aaPredicted RBP12.17□□□□□ -0.46
COMMD9-205ENST00000528608 SCAF11Q99590 1463 aaKnown RBP12.16□□□□□ -0.46
COMMD9-205ENST00000528608 SHISA8B8ZZ34 492 aa12.16□□□□□ -0.46
COMMD9-205ENST00000528608 NOS2P35228 1153 aa12.16□□□□□ -0.46
COMMD9-205ENST00000528608 TRIM26Q12899 539 aaPredicted RBP12.16□□□□□ -0.46
COMMD9-205ENST00000528608 LARGE2Q8N3Y3 721 aa12.16□□□□□ -0.46
COMMD9-205ENST00000528608 EDARADDQ8WWZ3 215 aa12.16□□□□□ -0.46
COMMD9-205ENST00000528608 GGA1Q9UJY5 639 aa12.16□□□□□ -0.46
COMMD9-205ENST00000528608 RBM19Q9Y4C8 960 aaKnown RBP12.16□□□□□ -0.46
COMMD9-205ENST00000528608 ZFYVE9O95405 1425 aa12.16□□□□□ -0.46
COMMD9-205ENST00000528608 ZNF335Q9H4Z2 1342 aaPredicted RBP12.15□□□□□ -0.46
COMMD9-205ENST00000528608 RIMS2Q9UQ26 1411 aa12.15□□□□□ -0.46
COMMD9-205ENST00000528608 PALM3A6NDB9 673 aaPredicted RBP12.15□□□□□ -0.46
COMMD9-205ENST00000528608 MAPTP10636 758 aaKnown RBP12.15□□□□□ -0.46
COMMD9-205ENST00000528608 SLCO4C1Q6ZQN7 724 aa12.15□□□□□ -0.46
COMMD9-205ENST00000528608 C1orf229Q6ZS94 237 aaPredicted RBP12.15□□□□□ -0.46
COMMD9-205ENST00000528608 ZNF594Q96JF6 807 aaPredicted RBP12.15□□□□□ -0.46
COMMD9-205ENST00000528608 EID1Q9Y6B2 187 aa12.15□□□□□ -0.46
COMMD9-205ENST00000528608 ACIN1Q9UKV3 1341 aaKnown RBP12.14□□□□□ -0.47
COMMD9-205ENST00000528608 IQGAP1P46940 1657 aa12.14□□□□□ -0.47
COMMD9-205ENST00000528608 CD33P20138 364 aa12.14□□□□□ -0.47
COMMD9-205ENST00000528608 TNP2Q05952 138 aa12.14□□□□□ -0.47
COMMD9-205ENST00000528608 RRAGCQ9HB90 399 aa12.14□□□□□ -0.47
COMMD9-205ENST00000528608 CHMP3Q9Y3E7 222 aa12.14□□□□□ -0.47
COMMD9-205ENST00000528608 LTBP4Q8N2S1 1624 aa12.13□□□□□ -0.47
COMMD9-205ENST00000528608 SERTM1A2A2V5 107 aa12.13□□□□□ -0.47
COMMD9-205ENST00000528608 FAM157BP0CG42 384 aa12.13□□□□□ -0.47
COMMD9-205ENST00000528608 ARAFP10398 606 aa12.13□□□□□ -0.47
COMMD9-205ENST00000528608 AMPD1P23109 780 aa12.13□□□□□ -0.47
COMMD9-205ENST00000528608 CALR3Q96L12 384 aaKnown RBP12.13□□□□□ -0.47
COMMD9-205ENST00000528608 TFIP11Q9UBB9 837 aaKnown RBP12.13□□□□□ -0.47
COMMD9-205ENST00000528608 KIF1BO60333 1816 aa12.12□□□□□ -0.47
COMMD9-205ENST00000528608 PSMA6P60900 246 aaKnown RBP12.12□□□□□ -0.47
COMMD9-205ENST00000528608 SAMD5Q5TGI4 173 aa12.12□□□□□ -0.47
COMMD9-205ENST00000528608 SIX5Q8N196 739 aa12.12□□□□□ -0.47
COMMD9-205ENST00000528608 TSPAN10Q9H1Z9 355 aaPredicted RBP12.12□□□□□ -0.47
COMMD9-205ENST00000528608 MAFBQ9Y5Q3 323 aaPredicted RBP12.12□□□□□ -0.47
COMMD9-205ENST00000528608 A6NJR5 290 aa12.11□□□□□ -0.47
COMMD9-205ENST00000528608 NEURL1BA8MQ27 555 aa12.11□□□□□ -0.47
COMMD9-205ENST00000528608 ZNF326Q5BKZ1 582 aaKnown RBP12.11□□□□□ -0.47
COMMD9-205ENST00000528608 FAM182BQ5T319 152 aa12.11□□□□□ -0.47
COMMD9-205ENST00000528608 SLC26A8Q96RN1 970 aa12.11□□□□□ -0.47
COMMD9-205ENST00000528608 NEUROD4Q9HD90 331 aa12.11□□□□□ -0.47
COMMD9-205ENST00000528608 ANKRD30BQ9BXX2 1392 aa12.1□□□□□ -0.47
COMMD9-205ENST00000528608 SFI1A8K8P3 1242 aa12.1□□□□□ -0.47
COMMD9-205ENST00000528608 M0R2N6 131 aa12.1□□□□□ -0.47
COMMD9-205ENST00000528608 EML1O00423 815 aa12.1□□□□□ -0.47
COMMD9-205ENST00000528608 RASA1P20936 1047 aa12.1□□□□□ -0.47
COMMD9-205ENST00000528608 SNRPNP63162 240 aaKnown RBP12.1□□□□□ -0.47
COMMD9-205ENST00000528608 SH3PXD2AQ5TCZ1 1133 aa12.1□□□□□ -0.47
COMMD9-205ENST00000528608 GPAT2Q6NUI2 795 aa12.1□□□□□ -0.47
COMMD9-205ENST00000528608 TSEN2Q8NCE0 465 aaKnown RBP12.1□□□□□ -0.47
COMMD9-205ENST00000528608 RHPN1Q8TCX5 695 aa12.1□□□□□ -0.47
COMMD9-205ENST00000528608 MKL2Q9ULH7 1088 aa12.1□□□□□ -0.47
COMMD9-205ENST00000528608 PPP1R15AO75807 674 aaPredicted RBP12.09□□□□□ -0.47
COMMD9-205ENST00000528608 LRRC69Q6ZNQ3 347 aa12.09□□□□□ -0.47
COMMD9-205ENST00000528608 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.09□□□□□ -0.47
COMMD9-205ENST00000528608 GPC6Q9Y625 555 aaPredicted RBP12.09□□□□□ -0.47
COMMD9-205ENST00000528608 STRCP1A6NGW2 1772 aa12.09□□□□□ -0.47
COMMD9-205ENST00000528608 CCDC144AA2RUR9 1427 aa12.09□□□□□ -0.47
COMMD9-205ENST00000528608 PLEKHG1Q9ULL1 1385 aa12.08□□□□□ -0.48
COMMD9-205ENST00000528608 NEXMIFQ5QGS0 1516 aa12.08□□□□□ -0.48
COMMD9-205ENST00000528608 EPXP11678 715 aa12.08□□□□□ -0.48
COMMD9-205ENST00000528608 ADH6P28332 368 aa12.08□□□□□ -0.48
COMMD9-205ENST00000528608 RGL3Q3MIN7 710 aa12.08□□□□□ -0.48
COMMD9-205ENST00000528608 MARK1Q9P0L2 795 aa12.08□□□□□ -0.48
COMMD9-205ENST00000528608 HCN2Q9UL51 889 aa12.08□□□□□ -0.48
COMMD9-205ENST00000528608 PRR12Q9ULL5 1215 aa12.08□□□□□ -0.48
COMMD9-205ENST00000528608 SPATA31E1Q6ZUB1 1445 aa12.08□□□□□ -0.48
COMMD9-205ENST00000528608 ADAMTS13Q76LX8 1427 aa12.07□□□□□ -0.48
COMMD9-205ENST00000528608 DCAF5Q96JK2 942 aa12.07□□□□□ -0.48
COMMD9-205ENST00000528608 EFSO43281 561 aa12.06□□□□□ -0.48
COMMD9-205ENST00000528608 LAMC2Q13753 1193 aa12.06□□□□□ -0.48
COMMD9-205ENST00000528608 LARP1Q6PKG0 1096 aaKnown RBP12.06□□□□□ -0.48
COMMD9-205ENST00000528608 PPP1R12CQ9BZL4 782 aa12.06□□□□□ -0.48
COMMD9-205ENST00000528608 AVENQ9NQS1 362 aaPredicted RBP12.06□□□□□ -0.48
COMMD9-205ENST00000528608 PPP1R12BO60237 982 aaPredicted RBP12.05□□□□□ -0.48
COMMD9-205ENST00000528608 IGHA1P01876 353 aa12.05□□□□□ -0.48
COMMD9-205ENST00000528608 STRN4Q9NRL3 753 aa12.05□□□□□ -0.48
COMMD9-205ENST00000528608 HCN4Q9Y3Q4 1203 aa12.05□□□□□ -0.48
COMMD9-205ENST00000528608 NRXN3Q9Y4C0 1643 aa12.04□□□□□ -0.48
COMMD9-205ENST00000528608 DKK1O94907 266 aa12.04□□□□□ -0.48
COMMD9-205ENST00000528608 HIRAP54198 1017 aaPredicted RBP12.04□□□□□ -0.48
COMMD9-205ENST00000528608 SEC13P55735 322 aa12.04□□□□□ -0.48
COMMD9-205ENST00000528608 BTBD6Q96KE9 485 aa12.04□□□□□ -0.48
COMMD9-205ENST00000528608 PHACTR1Q9C0D0 580 aa12.04□□□□□ -0.48
COMMD9-205ENST00000528608 TBX22Q9Y458 520 aa12.04□□□□□ -0.48
COMMD9-205ENST00000528608 PPLO60437 1756 aa12.04□□□□□ -0.48
COMMD9-205ENST00000528608 RPGRIP1LQ68CZ1 1315 aa12.04□□□□□ -0.48
COMMD9-205ENST00000528608 KCNA6P17658 529 aa12.03□□□□□ -0.48
COMMD9-205ENST00000528608 PCBP4P57723 403 aaKnown RBP12.03□□□□□ -0.48
COMMD9-205ENST00000528608 ZNF468Q5VIY5 522 aaPredicted RBP12.03□□□□□ -0.48
COMMD9-205ENST00000528608 C1orf53Q5VUE5 145 aa12.03□□□□□ -0.48
COMMD9-205ENST00000528608 ADGRF5Q8IZF2 1346 aa12.03□□□□□ -0.48
COMMD9-205ENST00000528608 PCGF6Q9BYE7 350 aa12.02□□□□□ -0.49
COMMD9-205ENST00000528608 KLF15Q9UIH9 416 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms