RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	PIP4K2A	P48426	406 aa	Predicted RBP	27.65	■■■□□ 2.02
GSDMD-208	ENST00000528475	CABP4	P57796	275 aa		27.65	■■■□□ 2.02
GSDMD-208	ENST00000528475	FOXO4	P98177	505 aa		27.65	■■■□□ 2.02
GSDMD-208	ENST00000528475	CCDC129	Q6ZRS4	1044 aa		27.65	■■■□□ 2.02
GSDMD-208	ENST00000528475	MTERF4	Q7Z6M4	381 aa	Known RBP	27.65	■■■□□ 2.02
GSDMD-208	ENST00000528475	MYRIP	Q8NFW9	859 aa		27.65	■■■□□ 2.02
GSDMD-208	ENST00000528475	HELLS	Q9NRZ9	838 aa		27.65	■■■□□ 2.02
GSDMD-208	ENST00000528475	JAK2	O60674	1132 aa		27.64	■■■□□ 2.02
GSDMD-208	ENST00000528475	LMBR1L	Q6UX01	489 aa		27.64	■■■□□ 2.02
GSDMD-208	ENST00000528475	MPND	Q8N594	471 aa		27.64	■■■□□ 2.02
GSDMD-208	ENST00000528475	SEC62	Q99442	399 aa	Known RBP	27.64	■■■□□ 2.02
GSDMD-208	ENST00000528475	TFIP11	Q9UBB9	837 aa	Known RBP	27.64	■■■□□ 2.02
GSDMD-208	ENST00000528475	HMGN5	P82970	282 aa	Known RBP	27.64	■■■□□ 2.01
GSDMD-208	ENST00000528475	BRF1	Q92994	677 aa		27.64	■■■□□ 2.01
GSDMD-208	ENST00000528475	RBM10	P98175	930 aa	Known RBP	27.63	■■■□□ 2.01
GSDMD-208	ENST00000528475	DSCC1	Q9BVC3	393 aa		27.63	■■■□□ 2.01
GSDMD-208	ENST00000528475	PFKFB2	O60825	505 aa		27.63	■■■□□ 2.01
GSDMD-208	ENST00000528475	DNTTIP2	Q5QJE6	756 aa	Known RBP	27.63	■■■□□ 2.01
GSDMD-208	ENST00000528475	DDX46	Q7L014	1031 aa	Known RBP	27.63	■■■□□ 2.01
GSDMD-208	ENST00000528475	NDUFB9	Q9Y6M9	179 aa		27.63	■■■□□ 2.01
GSDMD-208	ENST00000528475	PLCB2	Q00722	1185 aa		27.62	■■■□□ 2.01
GSDMD-208	ENST00000528475	ATG9A	Q7Z3C6	839 aa		27.62	■■■□□ 2.01
GSDMD-208	ENST00000528475	CADPS2	Q86UW7	1296 aa		27.62	■■■□□ 2.01
GSDMD-208	ENST00000528475	PGBD1	Q96JS3	809 aa		27.62	■■■□□ 2.01
GSDMD-208	ENST00000528475	NUP188	Q5SRE5	1749 aa		27.62	■■■□□ 2.01
GSDMD-208	ENST00000528475	TNS3	Q68CZ2	1445 aa		27.62	■■■□□ 2.01
GSDMD-208	ENST00000528475	CAMK4	Q16566	473 aa		27.61	■■■□□ 2.01
GSDMD-208	ENST00000528475	KIAA1524	Q8TCG1	905 aa		27.61	■■■□□ 2.01
GSDMD-208	ENST00000528475	HSP90B1	P14625	803 aa	Known RBP	27.61	■■■□□ 2.01
GSDMD-208	ENST00000528475	DHX32	Q7L7V1	743 aa	Known RBP	27.61	■■■□□ 2.01
GSDMD-208	ENST00000528475	AGXT2	Q9BYV1	514 aa		27.61	■■■□□ 2.01
GSDMD-208	ENST00000528475	FAM13B	Q9NYF5	915 aa		27.61	■■■□□ 2.01
GSDMD-208	ENST00000528475	CFAP45	Q9UL16	551 aa		27.61	■■■□□ 2.01
GSDMD-208	ENST00000528475	CHMP3	Q9Y3E7	222 aa		27.61	■■■□□ 2.01
GSDMD-208	ENST00000528475	LAMA4	Q16363	1823 aa		27.61	■■■□□ 2.01
GSDMD-208	ENST00000528475	CPD	O75976	1380 aa		27.61	■■■□□ 2.01
GSDMD-208	ENST00000528475	CHGB	P05060	677 aa		27.6	■■■□□ 2.01
GSDMD-208	ENST00000528475	SCRN1	Q12765	414 aa		27.6	■■■□□ 2.01
GSDMD-208	ENST00000528475	STOX1	Q6ZVD7	989 aa		27.6	■■■□□ 2.01
GSDMD-208	ENST00000528475	KCNF1	Q9H3M0	494 aa		27.6	■■■□□ 2.01
GSDMD-208	ENST00000528475	TJP1	Q07157	1748 aa		27.6	■■■□□ 2.01
GSDMD-208	ENST00000528475	SPEF2	Q9C093	1822 aa		27.6	■■■□□ 2.01
GSDMD-208	ENST00000528475	GTF2F1	P35269	517 aa	Known RBP eCLIP	27.6	■■■□□ 2.01
GSDMD-208	ENST00000528475	IL15	P40933	162 aa	Predicted RBP	27.6	■■■□□ 2.01
GSDMD-208	ENST00000528475	NAA16	Q6N069	864 aa	Predicted RBP	27.6	■■■□□ 2.01
GSDMD-208	ENST00000528475	PAG1	Q9NWQ8	432 aa		27.6	■■■□□ 2.01
GSDMD-208	ENST00000528475		H3BQV1	296 aa		27.59	■■■□□ 2.01
GSDMD-208	ENST00000528475	IFFO2	Q5TF58	517 aa		27.59	■■■□□ 2.01
GSDMD-208	ENST00000528475	CBX8	Q9HC52	389 aa		27.59	■■■□□ 2.01
GSDMD-208	ENST00000528475	NBPF26	B4DH59	902 aa		27.58	■■■□□ 2.01
GSDMD-208	ENST00000528475	ZMYM1	Q5SVZ6	1142 aa		27.58	■■■□□ 2.01
GSDMD-208	ENST00000528475	NBPF14	Q5TI25	921 aa		27.58	■■■□□ 2.01
GSDMD-208	ENST00000528475	NBPF10	Q6P3W6	841 aa	Known RBP	27.58	■■■□□ 2.01
GSDMD-208	ENST00000528475	NBPF15	Q8N660	670 aa		27.58	■■■□□ 2.01
GSDMD-208	ENST00000528475	CWC25	Q9NXE8	425 aa	Predicted RBP	27.58	■■■□□ 2.01
GSDMD-208	ENST00000528475	UBR2	Q8IWV8	1755 aa		27.58	■■■□□ 2.01
GSDMD-208	ENST00000528475	CAVIN2	O95810	425 aa		27.58	■■■□□ 2.01
GSDMD-208	ENST00000528475	EXOSC10	Q01780	885 aa	Known RBP	27.58	■■■□□ 2.01
GSDMD-208	ENST00000528475	ANO6	Q4KMQ2	910 aa		27.58	■■■□□ 2.01
GSDMD-208	ENST00000528475	TDRD7	Q8NHU6	1098 aa	Known RBP	27.58	■■■□□ 2.01
GSDMD-208	ENST00000528475	CKAP2L	Q8IYA6	745 aa		27.57	■■■□□ 2
GSDMD-208	ENST00000528475	NSUN7	Q8NE18	718 aa	Known RBP	27.57	■■■□□ 2
GSDMD-208	ENST00000528475	BICD2	Q8TD16	824 aa		27.57	■■■□□ 2
GSDMD-208	ENST00000528475	MYH15	Q9Y2K3	1946 aa		27.56	■■■□□ 2
GSDMD-208	ENST00000528475	NR1I2	O75469	434 aa		27.56	■■■□□ 2
GSDMD-208	ENST00000528475	LUZP1	Q86V48	1076 aa		27.56	■■■□□ 2
GSDMD-208	ENST00000528475	ATG3	Q9NT62	314 aa		27.56	■■■□□ 2
GSDMD-208	ENST00000528475	KIF3A	Q9Y496	699 aa		27.56	■■■□□ 2
GSDMD-208	ENST00000528475	STRC	Q7RTU9	1775 aa		27.55	■■■□□ 2
GSDMD-208	ENST00000528475	GOLIM4	O00461	696 aa		27.55	■■■□□ 2
GSDMD-208	ENST00000528475	CIAO1	O76071	339 aa		27.55	■■■□□ 2
GSDMD-208	ENST00000528475	CHRNA2	Q15822	529 aa		27.55	■■■□□ 2
GSDMD-208	ENST00000528475	ATL3	Q6DD88	541 aa		27.55	■■■□□ 2
GSDMD-208	ENST00000528475	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	27.55	■■■□□ 2
GSDMD-208	ENST00000528475	C17orf53	Q8N3J3	647 aa	Predicted RBP	27.55	■■■□□ 2
GSDMD-208	ENST00000528475	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	27.55	■■■□□ 2
GSDMD-208	ENST00000528475	ADD1	P35611	737 aa	Known RBP	27.55	■■■□□ 2
GSDMD-208	ENST00000528475	DDX17	Q92841	729 aa	Known RBP	27.55	■■■□□ 2
GSDMD-208	ENST00000528475	FGD1	P98174	961 aa		27.54	■■■□□ 2
GSDMD-208	ENST00000528475	CCDC191	Q8NCU4	936 aa		27.54	■■■□□ 2
GSDMD-208	ENST00000528475	CABLES1	Q8TDN4	633 aa		27.54	■■■□□ 2
GSDMD-208	ENST00000528475	CHMP4C	Q96CF2	233 aa		27.54	■■■□□ 2
GSDMD-208	ENST00000528475	DDX11	Q96FC9	970 aa		27.54	■■■□□ 2
GSDMD-208	ENST00000528475	NEUROD6	Q96NK8	337 aa		27.54	■■■□□ 2
GSDMD-208	ENST00000528475	RCOR1	Q9UKL0	485 aa		27.54	■■■□□ 2
GSDMD-208	ENST00000528475	PYCARD	Q9ULZ3	195 aa		27.54	■■■□□ 2
GSDMD-208	ENST00000528475	EYA2	O00167	538 aa		27.53	■■■□□ 2
GSDMD-208	ENST00000528475	SPC24	Q8NBT2	197 aa		27.53	■■■□□ 2
GSDMD-208	ENST00000528475	PAPPA	Q13219	1627 aa		27.53	■■■□□ 2
GSDMD-208	ENST00000528475	CTDNEP1	O95476	244 aa		27.53	■■■□□ 2
GSDMD-208	ENST00000528475	PLA2G4D	Q86XP0	818 aa		27.53	■■■□□ 2
GSDMD-208	ENST00000528475	TTLL7	Q6ZT98	887 aa		27.52	■■■□□ 2
GSDMD-208	ENST00000528475	FBXL16	Q8N461	479 aa		27.52	■■■□□ 2
GSDMD-208	ENST00000528475	LRRC2	Q9BYS8	371 aa		27.52	■■■□□ 2
GSDMD-208	ENST00000528475	SPATA31A3	Q5VYP0	1347 aa		27.52	■■■□□ 2
GSDMD-208	ENST00000528475	SALL1	Q9NSC2	1324 aa		27.52	■■■□□ 2
GSDMD-208	ENST00000528475	HSPD1	P10809	573 aa	Known RBP	27.52	■■■□□ 2
GSDMD-208	ENST00000528475	KCP	Q6ZWJ8	1503 aa		27.52	■■■□□ 2
GSDMD-208	ENST00000528475	PTPDC1	A2A3K4	754 aa		27.51	■■□□□ 1.99
GSDMD-208	ENST00000528475	ERVV-2	B6SEH9	535 aa		27.51	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms