RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 DDX58O95786 925 aaKnown RBP20.01■□□□□ 0.79
CLNS1A-210ENST00000528364 EGFRP00533 1210 aa20.01■□□□□ 0.79
CLNS1A-210ENST00000528364 IGKV5-2P06315 115 aa20.01■□□□□ 0.79
CLNS1A-210ENST00000528364 KSR2Q6VAB6 950 aa20.01■□□□□ 0.79
CLNS1A-210ENST00000528364 RTL9Q8NET4 1388 aa20■□□□□ 0.79
CLNS1A-210ENST00000528364 CCDC152Q4G0S7 254 aa20■□□□□ 0.79
CLNS1A-210ENST00000528364 TBC1D10BQ4KMP7 808 aaPredicted RBP20■□□□□ 0.79
CLNS1A-210ENST00000528364 RBM26Q5T8P6 1007 aaKnown RBP20■□□□□ 0.79
CLNS1A-210ENST00000528364 USP48Q86UV5 1035 aa20■□□□□ 0.79
CLNS1A-210ENST00000528364 EYA3Q99504 573 aa20■□□□□ 0.79
CLNS1A-210ENST00000528364 ZNF408Q9H9D4 720 aa20■□□□□ 0.79
CLNS1A-210ENST00000528364 PRDM10Q9NQV6 1147 aa20■□□□□ 0.79
CLNS1A-210ENST00000528364 ANKIB1Q9P2G1 1089 aa20■□□□□ 0.79
CLNS1A-210ENST00000528364 CDHR2Q9BYE9 1310 aa20■□□□□ 0.79
CLNS1A-210ENST00000528364 WTIPA6NIX2 430 aaPredicted RBP19.99■□□□□ 0.79
CLNS1A-210ENST00000528364 AOC2O75106 756 aa19.99■□□□□ 0.79
CLNS1A-210ENST00000528364 UFL1O94874 794 aa19.99■□□□□ 0.79
CLNS1A-210ENST00000528364 ZC3H15Q8WU90 426 aaKnown RBP19.99■□□□□ 0.79
CLNS1A-210ENST00000528364 DPF2Q92785 391 aa19.99■□□□□ 0.79
CLNS1A-210ENST00000528364 ZC3H12CQ9C0D7 883 aaKnown RBP19.99■□□□□ 0.79
CLNS1A-210ENST00000528364 PODXL2Q9NZ53 605 aa19.99■□□□□ 0.79
CLNS1A-210ENST00000528364 SALL2Q9Y467 1007 aaPredicted RBP19.99■□□□□ 0.79
CLNS1A-210ENST00000528364 POLR2AP24928 1970 aaKnown RBP19.98■□□□□ 0.79
CLNS1A-210ENST00000528364 HSPA8P11142 646 aaKnown RBP19.98■□□□□ 0.79
CLNS1A-210ENST00000528364 HSP90B1P14625 803 aaKnown RBP19.98■□□□□ 0.79
CLNS1A-210ENST00000528364 CCDC27Q2M243 656 aa19.98■□□□□ 0.79
CLNS1A-210ENST00000528364 CWF19L2Q2TBE0 894 aaKnown RBP19.98■□□□□ 0.79
CLNS1A-210ENST00000528364 TWISTNBQ3B726 338 aaPredicted RBP19.98■□□□□ 0.79
CLNS1A-210ENST00000528364 CDC37L1Q7L3B6 337 aa19.98■□□□□ 0.79
CLNS1A-210ENST00000528364 SAPCD2Q86UD0 394 aa19.98■□□□□ 0.79
CLNS1A-210ENST00000528364 SLC4A2P04920 1241 aa19.97■□□□□ 0.79
CLNS1A-210ENST00000528364 ECE1P42892 770 aa19.97■□□□□ 0.79
CLNS1A-210ENST00000528364 MAP2K1Q02750 393 aaPredicted RBP19.97■□□□□ 0.79
CLNS1A-210ENST00000528364 STK31Q9BXU1 1019 aa19.97■□□□□ 0.79
CLNS1A-210ENST00000528364 CHMP4AQ9BY43 222 aa19.97■□□□□ 0.79
CLNS1A-210ENST00000528364 GGA1Q9UJY5 639 aa19.97■□□□□ 0.79
CLNS1A-210ENST00000528364 SCN9AQ15858 1988 aa19.96■□□□□ 0.79
CLNS1A-210ENST00000528364 VIL1P09327 827 aaKnown RBP19.96■□□□□ 0.79
CLNS1A-210ENST00000528364 ANKRD18AQ8IVF6 992 aa19.96■□□□□ 0.79
CLNS1A-210ENST00000528364 TTLL11Q8NHH1 800 aa19.96■□□□□ 0.79
CLNS1A-210ENST00000528364 MRS2Q9HD23 443 aa19.96■□□□□ 0.79
CLNS1A-210ENST00000528364 G3V3G9 751 aa19.95■□□□□ 0.78
CLNS1A-210ENST00000528364 DCAF8Q5TAQ9 597 aa19.95■□□□□ 0.78
CLNS1A-210ENST00000528364 NEURL1BA8MQ27 555 aa19.94■□□□□ 0.78
CLNS1A-210ENST00000528364 RPS12P25398 132 aaKnown RBP19.94■□□□□ 0.78
CLNS1A-210ENST00000528364 CTSWP56202 376 aa19.94■□□□□ 0.78
CLNS1A-210ENST00000528364 GREM2Q9H772 168 aa19.94■□□□□ 0.78
CLNS1A-210ENST00000528364 H7C1W4 665 aa19.93■□□□□ 0.78
CLNS1A-210ENST00000528364 NEXNQ0ZGT2 675 aa19.93■□□□□ 0.78
CLNS1A-210ENST00000528364 KRT26Q7Z3Y9 468 aa19.93■□□□□ 0.78
CLNS1A-210ENST00000528364 TSKSQ9UJT2 592 aa19.93■□□□□ 0.78
CLNS1A-210ENST00000528364 ASTN2O75129 1339 aaPredicted RBP19.93■□□□□ 0.78
CLNS1A-210ENST00000528364 ADM5C9JUS6 153 aa19.92■□□□□ 0.78
CLNS1A-210ENST00000528364 UBE3BQ7Z3V4 1068 aa19.92■□□□□ 0.78
CLNS1A-210ENST00000528364 ZIC5Q96T25 663 aa19.92■□□□□ 0.78
CLNS1A-210ENST00000528364 MINPP1Q9UNW1 487 aa19.92■□□□□ 0.78
CLNS1A-210ENST00000528364 XDHP47989 1333 aa19.92■□□□□ 0.78
CLNS1A-210ENST00000528364 IL16Q14005 1332 aa19.92■□□□□ 0.78
CLNS1A-210ENST00000528364 ATP2B4P23634 1241 aa19.91■□□□□ 0.78
CLNS1A-210ENST00000528364 KIF4BQ2VIQ3 1234 aa19.91■□□□□ 0.78
CLNS1A-210ENST00000528364 CDC5LQ99459 802 aaKnown RBP19.91■□□□□ 0.78
CLNS1A-210ENST00000528364 FANCIQ9NVI1 1328 aa19.91■□□□□ 0.78
CLNS1A-210ENST00000528364 VAMP4O75379 141 aa19.9■□□□□ 0.78
CLNS1A-210ENST00000528364 MAP2K2P36507 400 aa19.9■□□□□ 0.78
CLNS1A-210ENST00000528364 FLIIQ13045 1269 aa19.9■□□□□ 0.78
CLNS1A-210ENST00000528364 DCPSQ96C86 337 aaKnown RBP19.9■□□□□ 0.78
CLNS1A-210ENST00000528364 BEGAINQ9BUH8 593 aa19.9■□□□□ 0.78
CLNS1A-210ENST00000528364 BSDC1Q9NW68 430 aaPredicted RBP19.9■□□□□ 0.78
CLNS1A-210ENST00000528364 ZNF316A6NFI3 1004 aaPredicted RBP19.89■□□□□ 0.77
CLNS1A-210ENST00000528364 ANP32CO43423 234 aa19.89■□□□□ 0.77
CLNS1A-210ENST00000528364 HUNKP57058 714 aa19.89■□□□□ 0.77
CLNS1A-210ENST00000528364 EXOSC9Q06265 439 aaKnown RBP19.89■□□□□ 0.77
CLNS1A-210ENST00000528364 GCKRQ14397 625 aa19.89■□□□□ 0.77
CLNS1A-210ENST00000528364 RSBN1LQ6PCB5 846 aaPredicted RBP19.89■□□□□ 0.77
CLNS1A-210ENST00000528364 HHIPL1Q96JK4 782 aa19.89■□□□□ 0.77
CLNS1A-210ENST00000528364 SPINK5Q9NQ38 1064 aaPredicted RBP19.89■□□□□ 0.77
CLNS1A-210ENST00000528364 CASP7P55210 303 aa19.88■□□□□ 0.77
CLNS1A-210ENST00000528364 FKBP5Q13451 457 aaPredicted RBP19.88■□□□□ 0.77
CLNS1A-210ENST00000528364 SCARF1Q14162 830 aa19.88■□□□□ 0.77
CLNS1A-210ENST00000528364 GMLQ99445 158 aa19.88■□□□□ 0.77
CLNS1A-210ENST00000528364 MXD3Q9BW11 206 aa19.88■□□□□ 0.77
CLNS1A-210ENST00000528364 ZNF280AP59817 542 aaPredicted RBP19.87■□□□□ 0.77
CLNS1A-210ENST00000528364 NCBP3Q53F19 620 aaKnown RBP19.87■□□□□ 0.77
CLNS1A-210ENST00000528364 TXNRD3Q86VQ6 643 aa19.87■□□□□ 0.77
CLNS1A-210ENST00000528364 WDR63Q8IWG1 891 aa19.87■□□□□ 0.77
CLNS1A-210ENST00000528364 AGBL3Q8NEM8 1001 aa19.87■□□□□ 0.77
CLNS1A-210ENST00000528364 DNAAF4Q8WXU2 420 aa19.87■□□□□ 0.77
CLNS1A-210ENST00000528364 GBA2Q9HCG7 927 aaPredicted RBP19.87■□□□□ 0.77
CLNS1A-210ENST00000528364 GGA3Q9NZ52 723 aa19.87■□□□□ 0.77
CLNS1A-210ENST00000528364 USP17L3A6NCW0 530 aa19.86■□□□□ 0.77
CLNS1A-210ENST00000528364 USP17L4A6NCW7 530 aa19.86■□□□□ 0.77
CLNS1A-210ENST00000528364 CCT4P50991 539 aaKnown RBP19.86■□□□□ 0.77
CLNS1A-210ENST00000528364 USP17L1Q7RTZ2 530 aa19.86■□□□□ 0.77
CLNS1A-210ENST00000528364 PODNQ7Z5L7 613 aa19.86■□□□□ 0.77
CLNS1A-210ENST00000528364 SCAF8Q9UPN6 1271 aaKnown RBP19.86■□□□□ 0.77
CLNS1A-210ENST00000528364 THSD7BQ9C0I4 1608 aa19.86■□□□□ 0.77
CLNS1A-210ENST00000528364 F6X3S4 739 aa19.85■□□□□ 0.77
CLNS1A-210ENST00000528364 USP17L8P0C7I0 530 aa19.85■□□□□ 0.77
CLNS1A-210ENST00000528364 ITGA6P23229 1130 aa19.85■□□□□ 0.77
CLNS1A-210ENST00000528364 ZEB1P37275 1124 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms