RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 TNNQ9UQP3 1299 aa14.66□□□□□ -0.06
CCDC90B-210ENST00000528149 RIC1Q4ADV7 1423 aa14.66□□□□□ -0.06
CCDC90B-210ENST00000528149 SPEF2Q9C093 1822 aa14.65□□□□□ -0.06
CCDC90B-210ENST00000528149 NOGQ13253 232 aa14.65□□□□□ -0.06
CCDC90B-210ENST00000528149 CRY2Q49AN0 593 aa14.65□□□□□ -0.06
CCDC90B-210ENST00000528149 PARP10Q53GL7 1025 aa14.65□□□□□ -0.06
CCDC90B-210ENST00000528149 DNAAF4Q8WXU2 420 aa14.65□□□□□ -0.06
CCDC90B-210ENST00000528149 CCDC85AQ96PX6 553 aaPredicted RBP14.65□□□□□ -0.06
CCDC90B-210ENST00000528149 PSMD1Q99460 953 aa14.65□□□□□ -0.06
CCDC90B-210ENST00000528149 NYXQ9GZU5 481 aa14.65□□□□□ -0.06
CCDC90B-210ENST00000528149 PPP1R42Q7Z4L9 355 aa14.64□□□□□ -0.07
CCDC90B-210ENST00000528149 ABCC4O15439 1325 aa14.64□□□□□ -0.07
CCDC90B-210ENST00000528149 NEURL1BA8MQ27 555 aa14.63□□□□□ -0.07
CCDC90B-210ENST00000528149 TRIM27P14373 513 aa14.63□□□□□ -0.07
CCDC90B-210ENST00000528149 HSP90AB3PQ58FF7 597 aa14.63□□□□□ -0.07
CCDC90B-210ENST00000528149 SLC4A10Q6U841 1118 aa14.63□□□□□ -0.07
CCDC90B-210ENST00000528149 GCC1Q96CN9 775 aa14.63□□□□□ -0.07
CCDC90B-210ENST00000528149 LRRC37AA6NMS7 1700 aa14.62□□□□□ -0.07
CCDC90B-210ENST00000528149 PLIN1O60240 522 aa14.62□□□□□ -0.07
CCDC90B-210ENST00000528149 HABP4Q5JVS0 413 aaKnown RBP14.62□□□□□ -0.07
CCDC90B-210ENST00000528149 SLC10A5Q5PT55 438 aa14.62□□□□□ -0.07
CCDC90B-210ENST00000528149 ZKSCAN2Q63HK3 967 aa14.62□□□□□ -0.07
CCDC90B-210ENST00000528149 ATF7IPQ6VMQ6 1270 aa14.62□□□□□ -0.07
CCDC90B-210ENST00000528149 LARGE2Q8N3Y3 721 aa14.62□□□□□ -0.07
CCDC90B-210ENST00000528149 API5Q9BZZ5 524 aaKnown RBP14.62□□□□□ -0.07
CCDC90B-210ENST00000528149 DUOX1Q9NRD9 1551 aa14.62□□□□□ -0.07
CCDC90B-210ENST00000528149 ADARB2Q9NS39 739 aaKnown RBP14.62□□□□□ -0.07
CCDC90B-210ENST00000528149 SAGE1Q9NXZ1 904 aa14.62□□□□□ -0.07
CCDC90B-210ENST00000528149 GPRC5DQ9NZD1 345 aa14.62□□□□□ -0.07
CCDC90B-210ENST00000528149 SH3TC1Q8TE82 1336 aa14.62□□□□□ -0.07
CCDC90B-210ENST00000528149 IRS4O14654 1257 aaPredicted RBP14.61□□□□□ -0.07
CCDC90B-210ENST00000528149 NEXNQ0ZGT2 675 aa14.61□□□□□ -0.07
CCDC90B-210ENST00000528149 CTU1Q7Z7A3 348 aaKnown RBP14.61□□□□□ -0.07
CCDC90B-210ENST00000528149 CLUAP1Q96AJ1 413 aa14.61□□□□□ -0.07
CCDC90B-210ENST00000528149 SEC31BQ9NQW1 1179 aa14.61□□□□□ -0.07
CCDC90B-210ENST00000528149 CWC25Q9NXE8 425 aaPredicted RBP14.61□□□□□ -0.07
CCDC90B-210ENST00000528149 HPS5Q9UPZ3 1129 aa14.61□□□□□ -0.07
CCDC90B-210ENST00000528149 IPO8O15397 1037 aaKnown RBP14.6□□□□□ -0.07
CCDC90B-210ENST00000528149 HUNKP57058 714 aa14.6□□□□□ -0.07
CCDC90B-210ENST00000528149 ARHGAP45Q92619 1136 aa14.6□□□□□ -0.07
CCDC90B-210ENST00000528149 RPGRQ92834 1020 aaKnown RBP14.6□□□□□ -0.07
CCDC90B-210ENST00000528149 CELF1Q92879 486 aaKnown RBP14.6□□□□□ -0.07
CCDC90B-210ENST00000528149 MKI67P46013 3256 aaKnown RBP14.6□□□□□ -0.07
CCDC90B-210ENST00000528149 AKAP11Q9UKA4 1901 aa14.59□□□□□ -0.07
CCDC90B-210ENST00000528149 FAM155AB1AL88 458 aaPredicted RBP14.59□□□□□ -0.07
CCDC90B-210ENST00000528149 RLBP1P12271 317 aa14.59□□□□□ -0.07
CCDC90B-210ENST00000528149 ALDH1B1P30837 517 aa14.59□□□□□ -0.07
CCDC90B-210ENST00000528149 HOXA10P31260 410 aaPredicted RBP14.59□□□□□ -0.07
CCDC90B-210ENST00000528149 CASP7P55210 303 aa14.59□□□□□ -0.07
CCDC90B-210ENST00000528149 TRIM28Q13263 835 aaKnown RBP14.59□□□□□ -0.07
CCDC90B-210ENST00000528149 BEND3Q5T5X7 828 aa14.59□□□□□ -0.07
CCDC90B-210ENST00000528149 UBE3BQ7Z3V4 1068 aa14.59□□□□□ -0.07
CCDC90B-210ENST00000528149 LINS1Q8NG48 757 aa14.59□□□□□ -0.07
CCDC90B-210ENST00000528149 PPEF1O14829 653 aaPredicted RBP14.58□□□□□ -0.08
CCDC90B-210ENST00000528149 TRPA1O75762 1119 aa14.58□□□□□ -0.08
CCDC90B-210ENST00000528149 PCCAP05165 728 aaPredicted RBP14.58□□□□□ -0.08
CCDC90B-210ENST00000528149 RRP1P56182 461 aaKnown RBP14.58□□□□□ -0.08
CCDC90B-210ENST00000528149 EPHA10Q5JZY3 1008 aa14.58□□□□□ -0.08
CCDC90B-210ENST00000528149 FTSJ3Q8IY81 847 aaKnown RBP14.58□□□□□ -0.08
CCDC90B-210ENST00000528149 NIM1KQ8IY84 436 aa14.58□□□□□ -0.08
CCDC90B-210ENST00000528149 ZBTB38Q8NAP3 1195 aaPredicted RBP14.58□□□□□ -0.08
CCDC90B-210ENST00000528149 CCDC191Q8NCU4 936 aa14.58□□□□□ -0.08
CCDC90B-210ENST00000528149 NLRP3Q96P20 1036 aa14.58□□□□□ -0.08
CCDC90B-210ENST00000528149 SRCIN1Q9C0H9 1055 aa14.58□□□□□ -0.08
CCDC90B-210ENST00000528149 RNF186Q9NXI6 227 aa14.58□□□□□ -0.08
CCDC90B-210ENST00000528149 WTIPA6NIX2 430 aaPredicted RBP14.57□□□□□ -0.08
CCDC90B-210ENST00000528149 GCKRQ14397 625 aa14.57□□□□□ -0.08
CCDC90B-210ENST00000528149 DLK2Q6UY11 383 aa14.57□□□□□ -0.08
CCDC90B-210ENST00000528149 TMEM57Q8N5G2 664 aa14.57□□□□□ -0.08
CCDC90B-210ENST00000528149 PANK1Q8TE04 598 aa14.57□□□□□ -0.08
CCDC90B-210ENST00000528149 PGAP2Q9UHJ9 254 aa14.57□□□□□ -0.08
CCDC90B-210ENST00000528149 H7C1W4 665 aa14.56□□□□□ -0.08
CCDC90B-210ENST00000528149 GMPSP49915 693 aaPredicted RBP14.56□□□□□ -0.08
CCDC90B-210ENST00000528149 HIRAP54198 1017 aaPredicted RBP14.56□□□□□ -0.08
CCDC90B-210ENST00000528149 KIF23Q02241 960 aaPredicted RBP14.56□□□□□ -0.08
CCDC90B-210ENST00000528149 C20orf194Q5TEA3 1177 aa14.56□□□□□ -0.08
CCDC90B-210ENST00000528149 CC2D2BQ6DHV5 1058 aa14.56□□□□□ -0.08
CCDC90B-210ENST00000528149 RGMBQ6NW40 437 aa14.56□□□□□ -0.08
CCDC90B-210ENST00000528149 DZIP1LQ8IYY4 767 aaKnown RBP14.56□□□□□ -0.08
CCDC90B-210ENST00000528149 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.56□□□□□ -0.08
CCDC90B-210ENST00000528149 TRPM4Q8TD43 1214 aa14.56□□□□□ -0.08
CCDC90B-210ENST00000528149 CRAMP1Q96RY5 1269 aa14.56□□□□□ -0.08
CCDC90B-210ENST00000528149 ALDH1L1O75891 902 aa14.55□□□□□ -0.08
CCDC90B-210ENST00000528149 CCT4P50991 539 aaKnown RBP14.55□□□□□ -0.08
CCDC90B-210ENST00000528149 CDC37L1Q7L3B6 337 aa14.55□□□□□ -0.08
CCDC90B-210ENST00000528149 RBM17Q96I25 401 aaKnown RBP14.55□□□□□ -0.08
CCDC90B-210ENST00000528149 PPIP5K2O43314 1243 aa14.54□□□□□ -0.08
CCDC90B-210ENST00000528149 FXR1P51114 621 aaKnown RBP eCLIP14.54□□□□□ -0.08
CCDC90B-210ENST00000528149 CTSWP56202 376 aa14.54□□□□□ -0.08
CCDC90B-210ENST00000528149 CXCL9Q07325 125 aa14.54□□□□□ -0.08
CCDC90B-210ENST00000528149 GRAPQ13588 217 aa14.54□□□□□ -0.08
CCDC90B-210ENST00000528149 SF3B3Q15393 1217 aaKnown RBP14.54□□□□□ -0.08
CCDC90B-210ENST00000528149 AOC3Q16853 763 aa14.54□□□□□ -0.08
CCDC90B-210ENST00000528149 INTS3Q68E01 1043 aaKnown RBP14.54□□□□□ -0.08
CCDC90B-210ENST00000528149 ITPRIPQ8IWB1 547 aa14.54□□□□□ -0.08
CCDC90B-210ENST00000528149 GRAPLQ8TC17 118 aaPredicted RBP14.54□□□□□ -0.08
CCDC90B-210ENST00000528149 GREM2Q9H772 168 aa14.54□□□□□ -0.08
CCDC90B-210ENST00000528149 SUPT16HQ9Y5B9 1047 aaKnown RBP14.54□□□□□ -0.08
CCDC90B-210ENST00000528149 A0A1B0GUL6 1792 aa14.54□□□□□ -0.08
CCDC90B-210ENST00000528149 CDHR2Q9BYE9 1310 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms